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Items: 1 to 20 of 58

1.

Use of hydrodynamic cavitation in (waste)water treatment.

Dular M, Griessler-Bulc T, Gutierrez-Aguirre I, Heath E, Kosjek T, Krivograd Klemenčič A, Oder M, Petkovšek M, Rački N, Ravnikar M, Šarc A, Širok B, Zupanc M, Žitnik M, Kompare B.

Ultrason Sonochem. 2016 Mar;29:577-88. doi: 10.1016/j.ultsonch.2015.10.010. Epub 2015 Oct 19.

PMID:
26515938
2.

Draft Genome Sequences of Dickeya sp. Isolates B16 (NIB Z 2098) and S1 (NIB Z 2099) Causing Soft Rot of Phalaenopsis Orchids.

Alič Š, Naglič T, Llop P, Toplak N, Koren S, Ravnikar M, Dreo T.

Genome Announc. 2015 Sep 10;3(5). pii: e00973-15. doi: 10.1128/genomeA.00973-15.

3.

LAMP assay and rapid sample preparation method for on-site detection of flavescence dorée phytoplasma in grapevine.

Kogovšek P, Hodgetts J, Hall J, Prezelj N, Nikolić P, Mehle N, Lenarčič R, Rotter A, Dickinson M, Boonham N, Dermastia M, Ravnikar M.

Plant Pathol. 2015 Apr;64(2):286-296. Epub 2014 Jul 23.

4.

Droplet digital PCR for absolute quantification of pathogens.

Gutiérrez-Aguirre I, Rački N, Dreo T, Ravnikar M.

Methods Mol Biol. 2015;1302:331-47. doi: 10.1007/978-1-4939-2620-6_24.

PMID:
25981265
5.

A new application of monolithic supports: the separation of viruses from one another.

Ruščić J, Gutiérrez-Aguirre I, Žnidarič MT, Kolundžija S, Slana A, Barut M, Ravnikar M, Krajačić M.

J Chromatogr A. 2015 Apr 3;1388:69-78. doi: 10.1016/j.chroma.2015.01.097. Epub 2015 Feb 9.

PMID:
25724100
6.

Deep sequencing of virus-derived small interfering RNAs and RNA from viral particles shows highly similar mutational landscapes of a plant virus population.

Kutnjak D, Rupar M, Gutierrez-Aguirre I, Curk T, Kreuze JF, Ravnikar M.

J Virol. 2015 May;89(9):4760-9. doi: 10.1128/JVI.03685-14. Epub 2015 Feb 11.

7.

The Detection Rate of Enteric Viruses and Clostridium difficile in a Waste Water Treatment Plant Effluent.

Steyer A, Gutiérrez-Aguirre I, Rački N, Beigot Glaser S, Brajer Humar B, Stražar M, Škrjanc I, Poljšak-Prijatelj M, Ravnikar M, Rupnik M.

Food Environ Virol. 2015 Feb 7. [Epub ahead of print]

PMID:
25663146
8.

Reverse transcriptase droplet digital PCR shows high resilience to PCR inhibitors from plant, soil and water samples.

Rački N, Dreo T, Gutierrez-Aguirre I, Blejec A, Ravnikar M.

Plant Methods. 2014 Dec 31;10(1):42. doi: 10.1186/s13007-014-0042-6. eCollection 2014.

9.

Methacrylate monolith chromatography as a tool for waterborne virus removal.

Rački N, Kramberger P, Steyer A, Gašperšič J, Štrancar A, Ravnikar M, Gutierrez-Aguirre I.

J Chromatogr A. 2015 Feb 13;1381:118-24. doi: 10.1016/j.chroma.2015.01.003. Epub 2015 Jan 10.

10.

Complete genome sequences of new divergent potato virus X isolates and discrimination between strains in a mixed infection using small RNAs sequencing approach.

Kutnjak D, Silvestre R, Cuellar W, Perez W, Müller G, Ravnikar M, Kreuze J.

Virus Res. 2014 Oct 13;191:45-50. doi: 10.1016/j.virusres.2014.07.012. Epub 2014 Jul 19.

PMID:
25051147
11.

Loop-mediated isothermal amplification of specific endoglucanase gene sequence for detection of the bacterial wilt pathogen Ralstonia solanacearum.

Lenarčič R, Morisset D, Pirc M, Llop P, Ravnikar M, Dreo T.

PLoS One. 2014 Apr 24;9(4):e96027. doi: 10.1371/journal.pone.0096027. eCollection 2014.

12.

Simultaneous detection of RNA and DNA targets based on multiplex isothermal amplification.

Dobnik D, Morisset D, Lenarčič R, Ravnikar M.

J Agric Food Chem. 2014 Apr 2;62(13):2989-96. doi: 10.1021/jf5002149. Epub 2014 Mar 21.

PMID:
24625323
13.

Survival and transmission of potato virus Y, pepino mosaic virus, and potato spindle tuber viroid in water.

Mehle N, Gutiérrez-Aguirre I, Prezelj N, Delic D, Vidic U, Ravnikar M.

Appl Environ Microbiol. 2014 Feb;80(4):1455-62. doi: 10.1128/AEM.03349-13. Epub 2013 Dec 13.

14.

One-step RT-droplet digital PCR: a breakthrough in the quantification of waterborne RNA viruses.

Rački N, Morisset D, Gutierrez-Aguirre I, Ravnikar M.

Anal Bioanal Chem. 2014 Jan;406(3):661-7. doi: 10.1007/s00216-013-7476-y. Epub 2013 Nov 26.

15.

Surface plasmon resonance for monitoring the interaction of Potato virus Y with monoclonal antibodies.

Gutiérrez-Aguirre I, Hodnik V, Glais L, Rupar M, Jacquot E, Anderluh G, Ravnikar M.

Anal Biochem. 2014 Feb 15;447:74-81. doi: 10.1016/j.ab.2013.10.032. Epub 2013 Nov 9.

PMID:
24220292
16.

Phylogeography and population structure of the biologically invasive phytopathogen Erwinia amylovora inferred using minisatellites.

Bühlmann A, Dreo T, Rezzonico F, Pothier JF, Smits TH, Ravnikar M, Frey JE, Duffy B.

Environ Microbiol. 2014 Jul;16(7):2112-25. doi: 10.1111/1462-2920.12289. Epub 2013 Oct 17.

PMID:
24112873
17.

High similarity of novel orthoreovirus detected in a child hospitalized with acute gastroenteritis to mammalian orthoreoviruses found in bats in Europe.

Steyer A, Gutiérrez-Aguire I, Kolenc M, Koren S, Kutnjak D, Pokorn M, Poljšak-Prijatelj M, Racki N, Ravnikar M, Sagadin M, Fratnik Steyer A, Toplak N.

J Clin Microbiol. 2013 Nov;51(11):3818-25. doi: 10.1128/JCM.01531-13. Epub 2013 Sep 11.

18.

Assessment of SNaPshot and single step RT-qPCR methods for discriminating Potato virus Y (PVY) subgroups.

Rupar M, Kogovšek P, Pompe-Novak M, Gutiérrez-Aguirre I, Delaunay A, Jacquot E, Ravnikar M.

J Virol Methods. 2013 Apr;189(1):93-100. doi: 10.1016/j.jviromet.2013.01.013. Epub 2013 Feb 5.

PMID:
23396125
19.

Expression of a hepatitis A virus antigen in Lactococcus lactis and Escherichia coli and evaluation of its immunogenicity.

Berlec A, Malovrh T, Zadravec P, Steyer A, Ravnikar M, Sabotič J, Poljšak-Prijatelj M, Štrukelj B.

Appl Microbiol Biotechnol. 2013 May;97(10):4333-42. doi: 10.1007/s00253-013-4722-3. Epub 2013 Jan 31.

PMID:
23371298
20.

A novel application of methacrylate based short monolithic columns: concentrating Potato spindle tuber viroid from water samples.

Ruščić J, Gutiérrez-Aguirre I, Urbas L, Kramberger P, Mehle N, Škorić D, Barut M, Ravnikar M, Krajačić M.

J Chromatogr A. 2013 Jan 25;1274:129-36. doi: 10.1016/j.chroma.2012.12.014. Epub 2012 Dec 17.

PMID:
23298847
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