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Items: 1 to 20 of 91


Characterization of piRNAs across postnatal development in mouse brain.

Ghosheh Y, Seridi L, Ryu T, Takahashi H, Orlando V, Carninci P, Ravasi T.

Sci Rep. 2016 Apr 26;6:25039. doi: 10.1038/srep25039.


Methamphetamine abuse affects gene expression in brain-derived microglia of SIV-infected macaques to enhance inflammation and promote virus targets.

Najera JA, Bustamante EA, Bortell N, Morsey B, Fox HS, Ravasi T, Marcondes MC.

BMC Immunol. 2016 Apr 23;17(1):7. doi: 10.1186/s12865-016-0145-0.


Correction: miRNA Repertoires of Demosponges Stylissa carteri and Xestospongia testudinaria.

Liew YJ, Ryu T, Aranda M, Ravasi T.

PLoS One. 2016 Apr 11;11(4):e0153731. doi: 10.1371/journal.pone.0153731. eCollection 2016. No abstract available.


Quantitative analysis of oyster larval proteome provides new insights into the effects of multiple climate change stressors.

Dineshram R, Chandramouli K, Ko GW, Zhang H, Qian PY, Ravasi T, Thiyagarajan V.

Glob Chang Biol. 2016 Jun;22(6):2054-68. doi: 10.1111/gcb.13249. Epub 2016 Mar 17.


Hologenome analysis of two marine sponges with different microbiomes.

Ryu T, Seridi L, Moitinho-Silva L, Oates M, Liew YJ, Mavromatis C, Wang X, Haywood A, Lafi FF, Kupresanin M, Sougrat R, Alzahrani MA, Giles E, Ghosheh Y, Schunter C, Baumgarten S, Berumen ML, Gao X, Aranda M, Foret S, Gough J, Voolstra CR, Hentschel U, Ravasi T.

BMC Genomics. 2016 Feb 29;17:158. doi: 10.1186/s12864-016-2501-0.


miRNA Repertoires of Demosponges Stylissa carteri and Xestospongia testudinaria.

Liew YJ, Ryu T, Aranda M, Ravasi T.

PLoS One. 2016 Feb 12;11(2):e0149080. doi: 10.1371/journal.pone.0149080. eCollection 2016. Erratum in: PLoS One. 2016;11(4):e0153731.


Co-transcriptomic Analysis by RNA Sequencing to Simultaneously Measure Regulated Gene Expression in Host and Bacterial Pathogen.

Ravasi T, Mavromatis CH, Bokil NJ, Schembri MA, Sweet MJ.

Methods Mol Biol. 2016;1390:145-58. doi: 10.1007/978-1-4939-3335-8_10.


Semi-automated quantification of living cells with internalized nanostructures.

Margineanu MB, Julfakyan K, Sommer C, Perez JE, Contreras MF, Khashab N, Kosel J, Ravasi T.

J Nanobiotechnology. 2016 Jan 15;14:4. doi: 10.1186/s12951-015-0153-x.


Cytotoxicity and intracellular dissolution of nickel nanowires.

Perez JE, Contreras MF, Vilanova E, Felix LP, Margineanu MB, Luongo G, Porter AE, Dunlop IE, Ravasi T, Kosel J.

Nanotoxicology. 2016 Sep;10(7):871-80. doi: 10.3109/17435390.2015.1132343. Epub 2016 Feb 5.


Transcriptome and proteome dynamics in larvae of the barnacle Balanus Amphitrite from the Red Sea.

Chandramouli KH, Al-Aqeel S, Ryu T, Zhang H, Seridi L, Ghosheh Y, Qian PY, Ravasi T.

BMC Genomics. 2015 Dec 15;16:1063. doi: 10.1186/s12864-015-2262-1.


Proteomic Changes Associated with Successive Reproductive Periods in Male Polychaetous Neanthes arenaceodentata.

Chandramouli KH, Reish D, Zhang H, Qian PY, Ravasi T.

Sci Rep. 2015 Sep 4;5:13561. doi: 10.1038/srep13561.


Selective phosphorylation during early macrophage differentiation.

Zhang H, Qian PY, Ravasi T.

Proteomics. 2015 Nov;15(21):3731-43. doi: 10.1002/pmic.201400511. Epub 2015 Sep 15.


Exploring seascape genetics and kinship in the reef sponge Stylissa carteri in the Red Sea.

Giles EC, Saenz-Agudelo P, Hussey NE, Ravasi T, Berumen ML.

Ecol Evol. 2015 Jul;5(13):2487-502. doi: 10.1002/ece3.1511. Epub 2015 Jun 1.


Erratum: From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks.

Cannistraci CV, Alanis-Lobato G, Ravasi T.

Sci Rep. 2015 Jul 21;5:9794. doi: 10.1038/srep09794. No abstract available.


Non-chemotoxic induction of cancer cell death using magnetic nanowires.

Contreras MF, Sougrat R, Zaher A, Ravasi T, Kosel J.

Int J Nanomedicine. 2015 Mar 17;10:2141-53. doi: 10.2147/IJN.S77081. eCollection 2015.


Highlighting nonlinear patterns in population genetics datasets.

Alanis-Lobato G, Cannistraci CV, Eriksson A, Manica A, Ravasi T.

Sci Rep. 2015 Jan 30;5:8140. doi: 10.1038/srep08140.


The co-transcriptome of uropathogenic Escherichia coli-infected mouse macrophages reveals new insights into host-pathogen interactions.

Mavromatis CH, Bokil NJ, Totsika M, Kakkanat A, Schaale K, Cannistraci CV, Ryu T, Beatson SA, Ulett GC, Schembri MA, Sweet MJ, Ravasi T.

Cell Microbiol. 2015 May;17(5):730-46. doi: 10.1111/cmi.12397. Epub 2015 Jan 24.


GeoChip-based insights into the microbial functional gene repertoire of marine sponges (high microbial abundance, low microbial abundance) and seawater.

Bayer K, Moitinho-Silva L, Brümmer F, Cannistraci CV, Ravasi T, Hentschel U.

FEMS Microbiol Ecol. 2014 Dec;90(3):832-43. doi: 10.1111/1574-6941.12441. Epub 2014 Nov 10.


Transcriptome analysis elucidates key developmental components of bryozoan lophophore development.

Wong YH, Ryu T, Seridi L, Ghosheh Y, Bougouffa S, Qian PY, Ravasi T.

Sci Rep. 2014 Oct 10;4:6534. doi: 10.1038/srep06534.


Dynamic epigenetic control of highly conserved noncoding elements.

Seridi L, Ryu T, Ravasi T.

PLoS One. 2014 Oct 7;9(10):e109326. doi: 10.1371/journal.pone.0109326. eCollection 2014.

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