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Results: 1 to 20 of 69

1.

Revealing microbial functional activities in the Red Sea sponge Stylissa carteri by metatranscriptomics.

Moitinho-Silva L, Seridi L, Ryu T, Voolstra CR, Ravasi T, Hentschel U.

Environ Microbiol. 2014 Jun 11. doi: 10.1111/1462-2920.12533. [Epub ahead of print]

PMID:
24920529
[PubMed - as supplied by publisher]
2.

Actinomycetes from Red Sea sponges: sources for chemical and phylogenetic diversity.

Abdelmohsen UR, Yang C, Horn H, Hajjar D, Ravasi T, Hentschel U.

Mar Drugs. 2014 May 12;12(5):2771-89. doi: 10.3390/md12052771.

PMID:
24824024
[PubMed - in process]
Free PMC Article
3.

Draft Genome Sequence of the Antitrypanosomally Active Sponge-Associated Bacterium Actinokineospora sp. Strain EG49.

Harjes J, Ryu T, Abdelmohsen UR, Moitinho-Silva L, Horn H, Ravasi T, Hentschel U.

Genome Announc. 2014 Mar 6;2(2). pii: e00160-14. doi: 10.1128/genomeA.00160-14.

PMID:
24604655
[PubMed]
Free PMC Article
4.

Quantitative proteomics study of larval settlement in the Barnacle Balanus amphitrite.

Chen ZF, Zhang H, Wang H, Matsumura K, Wong YH, Ravasi T, Qian PY.

PLoS One. 2014 Feb 13;9(2):e88744. doi: 10.1371/journal.pone.0088744. eCollection 2014.

PMID:
24551147
[PubMed - in process]
Free PMC Article
5.

The Global Invertebrate Genomics Alliance (GIGA): developing community resources to study diverse invertebrate genomes.

GIGA Community of Scientists, Bracken-Grissom H, Collins AG, Collins T, Crandall K, Distel D, Dunn C, Giribet G, Haddock S, Knowlton N, Martindale M, Medina M, Messing C, O'Brien SJ, Paulay G, Putnam N, Ravasi T, Rouse GW, Ryan JF, Schulze A, Wörheide G, Adamska M, Bailly X, Breinholt J, Browne WE, Diaz MC, Evans N, Flot JF, Fogarty N, Johnston M, Kamel B, Kawahara AY, Laberge T, Lavrov D, Michonneau F, Moroz LL, Oakley T, Osborne K, Pomponi SA, Rhodes A, Santos SR, Satoh N, Thacker RW, Van de Peer Y, Voolstra CR, Welch DM, Winston J, Zhou X.

J Hered. 2014 Jan-Feb;105(1):1-18. doi: 10.1093/jhered/est084.

PMID:
24336862
[PubMed - indexed for MEDLINE]
6.

Proteomic changes between male and female worms of the polychaetous annelid Neanthes arenaceodentata before and after spawning.

Chandramouli KH, Ravasi T, Reish D, Qian PY.

PLoS One. 2013 Aug 30;8(8):e72990. doi: 10.1371/journal.pone.0072990. eCollection 2013.

PMID:
24023665
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Specificity and transcriptional activity of microbiota associated with low and high microbial abundance sponges from the Red Sea.

Moitinho-Silva L, Bayer K, Cannistraci CV, Giles EC, Ryu T, Seridi L, Ravasi T, Hentschel U.

Mol Ecol. 2014 Mar;23(6):1348-63. doi: 10.1111/mec.12365. Epub 2013 Aug 20.

PMID:
23957633
[PubMed - indexed for MEDLINE]
8.

Exploitation of genetic interaction network topology for the prediction of epistatic behavior.

Alanis-Lobato G, Cannistraci CV, Ravasi T.

Genomics. 2013 Oct;102(4):202-8. doi: 10.1016/j.ygeno.2013.07.010. Epub 2013 Jul 25.

PMID:
23892246
[PubMed - indexed for MEDLINE]
9.

Proteomic and metabolomic profiles of marine Vibrio sp. 010 in response to an antifoulant challenge.

Chandramouli KH, Dash S, Zhang Y, Ravasi T, Qian PY.

Biofouling. 2013;29(7):789-802. doi: 10.1080/08927014.2013.805209. Epub 2013 Jul 4.

PMID:
23822634
[PubMed - indexed for MEDLINE]
10.

Minimum curvilinearity to enhance topological prediction of protein interactions by network embedding.

Cannistraci CV, Alanis-Lobato G, Ravasi T.

Bioinformatics. 2013 Jul 1;29(13):i199-209. doi: 10.1093/bioinformatics/btt208.

PMID:
23812985
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Questing for circadian dependence in ST-segment-elevation acute myocardial infarction: a multicentric and multiethnic study.

Ammirati E, Cristell N, Cianflone D, Vermi AC, Marenzi G, De Metrio M, Uren NG, Hu D, Ravasi T, Maseri A, Cannistraci CV.

Circ Res. 2013 May 10;112(10):e110-4. doi: 10.1161/CIRCRESAHA.112.300778.

PMID:
23661713
[PubMed]
Free Article
12.

From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks.

Cannistraci CV, Alanis-Lobato G, Ravasi T.

Sci Rep. 2013;3:1613. doi: 10.1038/srep01613.

PMID:
23563395
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Pivotal role of the muscle-contraction pathway in cryptorchidism and evidence for genomic connections with cardiomyopathy pathways in RASopathies.

Cannistraci CV, Ogorevc J, Zorc M, Ravasi T, Dovc P, Kunej T.

BMC Med Genomics. 2013 Feb 14;6:5. doi: 10.1186/1755-8794-6-5.

PMID:
23410028
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Transcriptome and quantitative proteome analysis reveals molecular processes associated with larval metamorphosis in the polychaete Pseudopolydora vexillosa.

Chandramouli KH, Sun J, Mok FS, Liu L, Qiu JW, Ravasi T, Qian PY.

J Proteome Res. 2013 Mar 1;12(3):1344-58. doi: 10.1021/pr3010088. Epub 2013 Jan 29.

PMID:
23294167
[PubMed - indexed for MEDLINE]
15.

The evolution of ultraconserved elements with different phylogenetic origins.

Ryu T, Seridi L, Ravasi T.

BMC Evol Biol. 2012 Dec 5;12:236. doi: 10.1186/1471-2148-12-236.

PMID:
23217155
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Identification and predictive value of interleukin-6+ interleukin-10+ and interleukin-6- interleukin-10+ cytokine patterns in ST-elevation acute myocardial infarction.

Ammirati E, Cannistraci CV, Cristell NA, Vecchio V, Palini AG, Tornvall P, Paganoni AM, Miendlarzewska EA, Sangalli LM, Monello A, Pernow J, Björnstedt Bennermo M, Marenzi G, Hu D, Uren NG, Cianflone D, Ravasi T, Manfredi AA, Maseri A.

Circ Res. 2012 Oct 26;111(10):1336-48. doi: 10.1161/CIRCRESAHA.111.262477. Epub 2012 Aug 29.

PMID:
22931953
[PubMed - indexed for MEDLINE]
Free Article
17.

Bacterial community profiles in low microbial abundance sponges.

Giles EC, Kamke J, Moitinho-Silva L, Taylor MW, Hentschel U, Ravasi T, Schmitt S.

FEMS Microbiol Ecol. 2013 Jan;83(1):232-41. doi: 10.1111/j.1574-6941.2012.01467.x. Epub 2012 Sep 4.

PMID:
22882238
[PubMed - indexed for MEDLINE]
18.

SECOM: a novel hash seed and community detection based-approach for genome-scale protein domain identification.

Fan M, Wong KC, Ryu T, Ravasi T, Gao X.

PLoS One. 2012;7(6):e39475. doi: 10.1371/journal.pone.0039475. Epub 2012 Jun 28.

PMID:
22761802
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

First proteome of the egg perivitelline fluid of a freshwater gastropod with aerial oviposition.

Sun J, Zhang H, Wang H, Heras H, Dreon MS, Ituarte S, Ravasi T, Qian PY, Qiu JW.

J Proteome Res. 2012 Aug 3;11(8):4240-8. doi: 10.1021/pr3003613. Epub 2012 Jul 13.

PMID:
22738194
[PubMed - indexed for MEDLINE]
20.

Involvement of Wnt signaling pathways in the metamorphosis of the bryozoan Bugula neritina.

Wong YH, Wang H, Ravasi T, Qian PY.

PLoS One. 2012;7(3):e33323. doi: 10.1371/journal.pone.0033323. Epub 2012 Mar 20.

PMID:
22448242
[PubMed - indexed for MEDLINE]
Free PMC Article

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