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Protein complexes predictions within protein interaction networks using genetic algorithms.

Ramadan E, Naef A, Ahmed M.

BMC Bioinformatics. 2016 Jul 25;17 Suppl 7:269. doi: 10.1186/s12859-016-1096-4.


Network topology measures for identifying disease-gene association in breast cancer.

Ramadan E, Alinsaif S, Hassan MR.

BMC Bioinformatics. 2016 Jul 25;17 Suppl 7:274. doi: 10.1186/s12859-016-1095-5.


Dietary Linoleic Acid Lowering Reduces Lipopolysaccharide-Induced Increase in Brain Arachidonic Acid Metabolism.

Taha AY, Blanchard HC, Cheon Y, Ramadan E, Chen M, Chang L, Rapoport SI.

Mol Neurobiol. 2016 Jun 23. [Epub ahead of print]


Comparisons of diazotrophic communities in native and agricultural desert ecosystems reveal plants as important drivers in diversity.

Köberl M, Erlacher A, Ramadan EM, El-Arabi TF, Müller H, Bragina A, Berg G.

FEMS Microbiol Ecol. 2016 Feb;92(2). pii: fiv166. doi: 10.1093/femsec/fiv166. Epub 2015 Dec 23.


Preparation of iron-enriched baker's yeast and its efficiency in recovery of rats from dietary iron deficiency.

Kyyaly MA, Powell C, Ramadan E.

Nutrition. 2015 Sep;31(9):1155-64. doi: 10.1016/j.nut.2015.04.017. Epub 2015 May 15.


D2-like receptor activation does not initiate a brain docosahexaenoic acid signal in unanesthetized rats.

Taha AY, Chang L, Chen M, Rapoport SI, Ramadan E.

BMC Neurosci. 2014 Oct 30;15:113. doi: 10.1186/1471-2202-15-113.


Core microbial functional activities in ocean environments revealed by global metagenomic profiling analyses.

Ferreira AJ, Siam R, Setubal JC, Moustafa A, Sayed A, Chambergo FS, Dawe AS, Ghazy MA, Sharaf H, Ouf A, Alam I, Abdel-Haleem AM, Lehvaslaiho H, Ramadan E, Antunes A, Stingl U, Archer JA, Jankovic BR, Sogin M, Bajic VB, El-Dorry H.

PLoS One. 2014 Jun 12;9(6):e97338. doi: 10.1371/journal.pone.0097338. eCollection 2014.


A module of human peripheral blood mononuclear cell transcriptional network containing primitive and differentiation markers is related to specific cardiovascular health variables.

Moldovan L, Anghelina M, Kantor T, Jones D, Ramadan E, Xiang Y, Huang K, Kolipaka A, Malarkey W, Ghasemzadeh N, Mohler PJ, Quyyumi A, Moldovan NI.

PLoS One. 2014 Apr 23;9(4):e95124. doi: 10.1371/journal.pone.0095124. eCollection 2014. Erratum in: PLoS One. 2014;9(7):e104595.


Effects of bacterial inoculants on the indigenous microbiome and secondary metabolites of chamomile plants.

Schmidt R, Köberl M, Mostafa A, Ramadan EM, Monschein M, Jensen KB, Bauer R, Berg G.

Front Microbiol. 2014 Feb 19;5:64. doi: 10.3389/fmicb.2014.00064. eCollection 2014.


The role of plain radiography in predicting renal stone fragmentation by shockwave lithotripsy in the era of noncontrast multidetector computed tomography.

Hussein A, Anwar A, Abol-Nasr M, Ramadan E, Shaaban A.

J Endourol. 2014 Jul;28(7):850-3. doi: 10.1089/end.2014.0034. Epub 2014 Mar 31.


Transient postnatal fluoxetine leads to decreased brain arachidonic acid metabolism and cytochrome P450 4A in adult mice.

Ramadan E, Blanchard H, Cheon Y, Fox MA, Chang L, Chen M, Ma K, Rapoport SI, Basselin M.

Prostaglandins Leukot Essent Fatty Acids. 2014 May;90(5):191-7. doi: 10.1016/j.plefa.2014.01.003. Epub 2014 Jan 30.


The microbiome of medicinal plants: diversity and importance for plant growth, quality and health.

Köberl M, Schmidt R, Ramadan EM, Bauer R, Berg G.

Front Microbiol. 2013 Dec 20;4:400. doi: 10.3389/fmicb.2013.00400. Review.


Effect of acid hydrolysis and fungal biotreatment on agro-industrial wastes for obtainment of free sugars for bioethanol production.

El-Tayeb TS, Abdelhafez AA, Ali SH, Ramadan EM.

Braz J Microbiol. 2012 Oct;43(4):1523-35. doi: 10.1590/S1517-838220120004000037. Epub 2012 Jun 1.


Bacillus and Streptomyces were selected as broad-spectrum antagonists against soilborne pathogens from arid areas in Egypt.

Köberl M, Ramadan EM, Adam M, Cardinale M, Hallmann J, Heuer H, Smalla K, Berg G.

FEMS Microbiol Lett. 2013 May;342(2):168-78. doi: 10.1111/1574-6968.12089. Epub 2013 Feb 11.


Upregulated expression of brain enzymatic markers of arachidonic and docosahexaenoic acid metabolism in a rat model of the metabolic syndrome.

Taha AY, Gao F, Ramadan E, Cheon Y, Rapoport SI, Kim HW.

BMC Neurosci. 2012 Oct 30;13:131. doi: 10.1186/1471-2202-13-131.


Altered lipid concentrations of liver, heart and plasma but not brain in HIV-1 transgenic rats.

Taha AY, Basselin M, Ramadan E, Modi HR, Rapoport SI, Cheon Y.

Prostaglandins Leukot Essent Fatty Acids. 2012 Oct-Nov;87(4-5):91-101. doi: 10.1016/j.plefa.2012.07.006. Epub 2012 Aug 29.


Gabapentin's minimal action on markers of rat brain arachidonic acid metabolism agrees with its inefficacy against bipolar disorder.

Reese EA, Cheon Y, Ramadan E, Kim HW, Chang L, Rao JS, Rapoport SI, Taha AY.

Prostaglandins Leukot Essent Fatty Acids. 2012 Aug-Sep;87(2-3):71-7. doi: 10.1016/j.plefa.2012.06.003. Epub 2012 Jul 27.


Chronic lithium feeding reduces upregulated brain arachidonic acid metabolism in HIV-1 transgenic rat.

Ramadan E, Basselin M, Chang L, Chen M, Ma K, Rapoport SI.

J Neuroimmune Pharmacol. 2012 Sep;7(3):701-13. doi: 10.1007/s11481-012-9381-0. Epub 2012 Jul 4.


Knocking out the dopamine reuptake transporter (DAT) does not change the baseline brain arachidonic acid signal in the mouse.

Ramadan E, Chang L, Chen M, Ma K, Hall FS, Uhl GR, Rapoport SI, Basselin M.

Int J Neurosci. 2012 Jul;122(7):373-80. doi: 10.3109/00207454.2012.665972. Epub 2012 Mar 26.


Imaging brain signal transduction and metabolism via arachidonic and docosahexaenoic acid in animals and humans.

Basselin M, Ramadan E, Rapoport SI.

Brain Res Bull. 2012 Feb 10;87(2-3):154-71. doi: 10.1016/j.brainresbull.2011.12.001. Epub 2011 Dec 9. Review.

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