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Results: 1 to 20 of 27

1.

Text-mining-assisted biocuration workflows in Argo.

Rak R, Batista-Navarro RT, Rowley A, Carter J, Ananiadou S.

Database (Oxford). 2014 Jul 18;2014. pii: bau070. doi: 10.1093/database/bau070. Print 2014.

PMID:
25037308
[PubMed - in process]
Free PMC Article
2.

Processing biological literature with customizable Web services supporting interoperable formats.

Rak R, Batista-Navarro RT, Carter J, Rowley A, Ananiadou S.

Database (Oxford). 2014 Jul 8;2014. pii: bau064. doi: 10.1093/database/bau064. Print 2014.

PMID:
25006225
[PubMed - in process]
Free PMC Article
3.

BioC interoperability track overview.

Comeau DC, Batista-Navarro RT, Dai HJ, Doğan RI, Yepes AJ, Khare R, Lu Z, Marques H, Mattingly CJ, Neves M, Peng Y, Rak R, Rinaldi F, Tsai RT, Verspoor K, Wiegers TC, Wu CH, Wilbur WJ.

Database (Oxford). 2014 Jun 30;2014. pii: bau053. doi: 10.1093/database/bau053. Print 2014.

PMID:
24980129
[PubMed - in process]
Free PMC Article
4.

Targeting LIM kinase in cancer and neurofibromatosis.

Rak R, Kloog Y.

Cell Cycle. 2014 May 1;13(9):1360-1. doi: 10.4161/cc.28748. Epub 2014 Apr 3. No abstract available.

PMID:
24698779
[PubMed - in process]
Free Article
5.

A method for integrating and ranking the evidence for biochemical pathways by mining reactions from text.

Miwa M, Ohta T, Rak R, Rowley A, Kell DB, Pyysalo S, Ananiadou S.

Bioinformatics. 2013 Jul 1;29(13):i44-52. doi: 10.1093/bioinformatics/btt227.

PMID:
23813008
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011.

Pyysalo S, Ohta T, Rak R, Sullivan D, Mao C, Wang C, Sobral B, Tsujii J, Ananiadou S.

BMC Bioinformatics. 2012 Jun 26;13 Suppl 11:S2. doi: 10.1186/1471-2105-13-S11-S2.

PMID:
22759456
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Computer-based identification of a novel LIMK1/2 inhibitor that synergizes with salirasib to destabilize the actin cytoskeleton.

Mashiach-Farkash E, Rak R, Elad-Sfadia G, Haklai R, Carmeli S, Kloog Y, Wolfson HJ.

Oncotarget. 2012 Jun;3(6):629-39.

PMID:
22776759
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Argo: an integrative, interactive, text mining-based workbench supporting curation.

Rak R, Rowley A, Black W, Ananiadou S.

Database (Oxford). 2012 Mar 20;2012:bas010. doi: 10.1093/database/bas010. Print 2012.

PMID:
22434844
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Percutaneous balloon rhizotomy for trigeminal neuralgia using three-dimensional fluoroscopy.

Olivero WC, Wang H, Rak R, Sharrock MF.

World Neurosurg. 2012 Jan;77(1):202.e1-3. doi: 10.1016/j.wneu.2011.03.041. Epub 2011 Nov 18.

PMID:
22405398
[PubMed - indexed for MEDLINE]
10.

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.

Krallinger M, Vazquez M, Leitner F, Salgado D, Chatr-Aryamontri A, Winter A, Perfetto L, Briganti L, Licata L, Iannuccelli M, Castagnoli L, Cesareni G, Tyers M, Schneider G, Rinaldi F, Leaman R, Gonzalez G, Matos S, Kim S, Wilbur WJ, Rocha L, Shatkay H, Tendulkar AV, Agarwal S, Liu F, Wang X, Rak R, Noto K, Elkan C, Lu Z, Dogan RI, Fontaine JF, Andrade-Navarro MA, Valencia A.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S3. doi: 10.1186/1471-2105-12-S8-S3.

PMID:
22151929
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Detecting experimental techniques and selecting relevant documents for protein-protein interactions from biomedical literature.

Wang X, Rak R, Restificar A, Nobata C, Rupp CJ, Batista-Navarro RT, Nawaz R, Ananiadou S.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S11. doi: 10.1186/1471-2105-12-S8-S11.

PMID:
22151769
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Identification of electron beam vibration sources by separation of magnetic distortion from electric distortion on scanning electron microscope imaging.

Pluska M, Czerwinski A, Ratajczak J, Katcki J, Oskwarek Ł, Rak R.

J Microsc. 2010 Mar;237(3):325-8. doi: 10.1111/j.1365-2818.2009.03252.x.

PMID:
20500389
[PubMed]
13.

Separation of image-distortion sources and magnetic-field measurement in scanning electron microscope (SEM).

Płuska M, Czerwinski A, Ratajczak J, Katcki J, Oskwarek L, Rak R.

Micron. 2009 Jan;40(1):46-50. doi: 10.1016/j.micron.2008.01.009. Epub 2008 Jan 21.

PMID:
18321720
[PubMed]
14.

xGENIA: A comprehensive OWL ontology based on the GENIA corpus.

Rak R, Kurgan L, Reformat M.

Bioinformation. 2007 Mar 20;1(9):360-2.

PMID:
17597921
[PubMed]
Free PMC Article
15.

Multilabel associative classification categorization of MEDLINE articles into MeSH keywords.

Rak R, Kurgan LA, Reformat M.

IEEE Eng Med Biol Mag. 2007 Mar-Apr;26(2):47-55.

PMID:
17441608
[PubMed - indexed for MEDLINE]
16.

Commentary.

Sekhar LN, Rak R.

Skull Base. 2002 May;12(2):71. No abstract available.

PMID:
17167650
[PubMed]
Free PMC Article
17.

Elimination of scanning electron microscopy image periodic distortions with digital signal-processing methods.

Płuska M, Czerwinski A, Ratajczak J, Katcki J, Rak R.

J Microsc. 2006 Oct;224(Pt 1):89-92.

PMID:
17100914
[PubMed]
18.

Reconstruction options for complex middle cerebral artery aneurysms.

Sekhar LN, Stimac D, Bakir A, Rak R.

Neurosurgery. 2005 Jan;56(1 Suppl):66-74; discussion 66-74.

PMID:
15799794
[PubMed - indexed for MEDLINE]
19.

Unusual presentation of a cervical pseudomeningocele: a case report and review of the literature.

Tate S, Rak RA, Bailey JS.

J Oral Maxillofac Surg. 2005 Apr;63(4):556-9. Review. No abstract available.

PMID:
15789331
[PubMed - indexed for MEDLINE]
20.

Bypass grafting and revascularization in the management of posterior circulation aneurysms.

Evans JJ, Sekhar LN, Rak R, Stimac D.

Neurosurgery. 2004 Nov;55(5):1036-49.

PMID:
15509310
[PubMed - indexed for MEDLINE]

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