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Results: 1 to 20 of 65

1.

Identification of a new export signal in Plasmodium yoelii: identification of a new exportome.

Siau A, Huang X, Yam XY, Bob NS, Sun H, Rajapakse JC, Renia L, Preiser PR.

Cell Microbiol. 2014 May;16(5):673-86. doi: 10.1111/cmi.12293. Epub 2014 Apr 4.

PMID:
24636637
[PubMed - in process]
2.

qFibrosis: A fully-quantitative innovative method incorporating histological features to facilitate accurate fibrosis scoring in animal model and chronic hepatitis B patients.

Xu S, Wang Y, Tai DC, Wang S, Cheng CL, Peng Q, Yan J, Chen Y, Sun J, Liang X, Zhu Y, Rajapakse JC, Welsch RE, So PT, Wee A, Hou J, Yu H.

J Hepatol. 2014 Aug;61(2):260-9. doi: 10.1016/j.jhep.2014.02.015. Epub 2014 Feb 26.

PMID:
24583249
[PubMed - in process]
Free Article
3.

Extracting rate changes in transcriptional regulation from MEDLINE abstracts.

Liu W, Miao K, Li G, Chang K, Zheng J, Rajapakse JC.

BMC Bioinformatics. 2014;15 Suppl 2:S4. doi: 10.1186/1471-2105-15-S2-S4. Epub 2014 Jan 24.

PMID:
24564647
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Multiclass gene selection using Pareto-fronts.

Rajapakse JC, Mundra PA.

IEEE/ACM Trans Comput Biol Bioinform. 2013 Jan-Feb;10(1):87-97. doi: 10.1109/TCBB.2013.1.

PMID:
23702546
[PubMed - indexed for MEDLINE]
5.

Spatiotemporal quantification of cell dynamics in the lung following influenza virus infection.

Yin L, Xu S, Cheng J, Zheng D, Limmon GV, Leung NH, Rajapakse JC, Chow VT, Chen J, Yu H.

J Biomed Opt. 2013 Apr;18(4):046001. doi: 10.1117/1.JBO.18.4.046001.

PMID:
23545853
[PubMed - indexed for MEDLINE]
6.

Serum proteome and cytokine analysis in a longitudinal cohort of adults with primary dengue infection reveals predictive markers of DHF.

Kumar Y, Liang C, Bo Z, Rajapakse JC, Ooi EE, Tannenbaum SR.

PLoS Negl Trop Dis. 2012;6(11):e1887. doi: 10.1371/journal.pntd.0001887. Epub 2012 Nov 29.

PMID:
23209847
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Neutrophils infected with highly virulent influenza H3N2 virus exhibit augmented early cell death and rapid induction of type I interferon signaling pathways.

Ivan FX, Tan KS, Phoon MC, Engelward BP, Welsch RE, Rajapakse JC, Chow VT.

Genomics. 2012 Nov 27. pii: S0888-7543(12)00228-5. doi: 10.1016/j.ygeno.2012.11.008. [Epub ahead of print]

PMID:
23195410
[PubMed - as supplied by publisher]
8.

Stability of building gene regulatory networks with sparse autoregressive models.

Rajapakse JC, Mundra PA.

BMC Bioinformatics. 2011 Nov 30;12 Suppl 13:S17. doi: 10.1186/1471-2105-12-S13-S17. Epub 2011 Nov 30.

PMID:
22373004
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Correlation of cell membrane dynamics and cell motility.

Veronika M, Welsch R, Ng A, Matsudaira P, Rajapakse JC.

BMC Bioinformatics. 2011 Nov 30;12 Suppl 13:S19. doi: 10.1186/1471-2105-12-S13-S19. Epub 2011 Nov 30.

PMID:
22372978
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Features for cells and nuclei classification.

Liu S, Mundra PA, Rajapakse JC.

Conf Proc IEEE Eng Med Biol Soc. 2011;2011:6601-4. doi: 10.1109/IEMBS.2011.6091628.

PMID:
22255852
[PubMed - indexed for MEDLINE]
11.

Estimation of the population of neutrophils induced to differentiate from the MPRO mouse promyelocytic cell line.

Ivan FX, Welsch RE, Chow VT, Rajapakse JC.

Conf Proc IEEE Eng Med Biol Soc. 2011;2011:6001-4. doi: 10.1109/IEMBS.2011.6091483.

PMID:
22255707
[PubMed - indexed for MEDLINE]
12.

Staging tissues with conditional random fields.

Rajapakse JC, Liu S.

Conf Proc IEEE Eng Med Biol Soc. 2011;2011:5128-31. doi: 10.1109/IEMBS.2011.6091270.

PMID:
22255493
[PubMed - indexed for MEDLINE]
13.

Improving signal-to-noise ratio of structured light microscopy based on photon reassignment.

Singh VR, Choi H, Yew EY, Bhattacharya D, Yuan L, Sheppard CJ, Rajapakse JC, Barbastathis G, So PT.

Biomed Opt Express. 2012 Jan 1;3(1):206-14. doi: 10.1364/BOE.3.000206. Epub 2011 Dec 22.

PMID:
22254180
[PubMed]
Free PMC Article
14.

Differential pulmonary transcriptomic profiles in murine lungs infected with low and highly virulent influenza H3N2 viruses reveal dysregulation of TREM1 signaling, cytokines, and chemokines.

Ivan FX, Rajapakse JC, Welsch RE, Rozen SG, Narasaraju T, Xiong GM, Engelward BP, Chow VT.

Funct Integr Genomics. 2012 Mar;12(1):105-17. doi: 10.1007/s10142-011-0247-y. Epub 2011 Aug 28.

PMID:
21874528
[PubMed - indexed for MEDLINE]
15.

Tree-structured algorithm for long weak motif discovery.

Sun HQ, Low MY, Hsu WJ, Tan CW, Rajapakse JC.

Bioinformatics. 2011 Oct 1;27(19):2641-7. doi: 10.1093/bioinformatics/btr459. Epub 2011 Aug 5.

PMID:
21821665
[PubMed - indexed for MEDLINE]
Free Article
16.

Levodopa and the feedback process on set-shifting in Parkinson's disease.

Au WL, Zhou J, Palmes P, Sitoh YY, Tan LC, Rajapakse JC.

Hum Brain Mapp. 2012 Jan;33(1):27-39. doi: 10.1002/hbm.21187. Epub 2011 Mar 24.

PMID:
21438075
[PubMed - indexed for MEDLINE]
17.

Toward better understanding of protein secondary structure: extracting prediction rules.

Nguyen MN, Zurada JM, Rajapakse JC.

IEEE/ACM Trans Comput Biol Bioinform. 2011 May-Jun;8(3):858-64. doi: 10.1109/TCBB.2010.16.

PMID:
21393657
[PubMed - indexed for MEDLINE]
18.

RecMotif: a novel fast algorithm for weak motif discovery.

Sun HQ, Low MY, Hsu WJ, Rajapakse JC.

BMC Bioinformatics. 2010 Dec 14;11 Suppl 11:S8. doi: 10.1186/1471-2105-11-S11-S8.

PMID:
21172058
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Pulse-modulated second harmonic imaging microscope quantitatively demonstrates marked increase of collagen in tumor after chemotherapy.

Raja AM, Xu S, Sun W, Zhou J, Tai DC, Chen CS, Rajapakse JC, So PT, Yu H.

J Biomed Opt. 2010 Sep-Oct;15(5):056016. doi: 10.1117/1.3497565.

PMID:
21054110
[PubMed - indexed for MEDLINE]
20.

Toward surface quantification of liver fibrosis progression.

He Y, Kang CH, Xu S, Tuo X, Trasti S, Tai DC, Raja AM, Peng Q, So PT, Rajapakse JC, Welsch R, Yu H.

J Biomed Opt. 2010 Sep-Oct;15(5):056007. doi: 10.1117/1.3490414.

PMID:
21054101
[PubMed - indexed for MEDLINE]

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