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Results: 1 to 20 of 96

1.

QSAR-Based Models for Designing Quinazoline/Imidazothiazoles/Pyrazolopyrimidines Based Inhibitors against Wild and Mutant EGFR.

Chauhan JS, Dhanda SK, Singla D; Open Source Drug Discovery Consortium, Agarwal SM, Raghava GP.

PLoS One. 2014 Jul 3;9(7):e101079. doi: 10.1371/journal.pone.0101079. eCollection 2014.

PMID:
24992720
[PubMed - in process]
Free PMC Article
2.

ParaPep: a web resource for experimentally validated antiparasitic peptide sequences and their structures.

Mehta D, Anand P, Kumar V, Joshi A, Mathur D, Singh S, Tuknait A, Chaudhary K, Gautam SK, Gautam A, Varshney GC, Raghava GP.

Database (Oxford). 2014 Jun 12;2014. pii: bau051. doi: 10.1093/database/bau051. Print 2014.

PMID:
24923818
[PubMed - in process]
Free PMC Article
3.

Designing of promiscuous inhibitors against pancreatic cancer cell lines.

Kumar R, Chaudhary K, Singla D, Gautam A, Raghava GP.

Sci Rep. 2014 Apr 14;4:4668. doi: 10.1038/srep04668.

PMID:
24728108
[PubMed - in process]
Free PMC Article
4.

Herceptin resistance database for understanding mechanism of resistance in breast cancer patients.

Ahmad S, Gupta S, Kumar R, Varshney GC, Raghava GP.

Sci Rep. 2014 Mar 27;4:4483. doi: 10.1038/srep04483.

PMID:
24670875
[PubMed - in process]
Free PMC Article
5.

PCMdb: pancreatic cancer methylation database.

Nagpal G, Sharma M, Kumar S, Chaudhary K, Gupta S, Gautam A, Raghava GP.

Sci Rep. 2014 Feb 26;4:4197. doi: 10.1038/srep04197.

PMID:
24569397
[PubMed - in process]
Free PMC Article
6.

Prediction and classification of ncRNAs using structural information.

Panwar B, Arora A, Raghava GP.

BMC Genomics. 2014 Feb 13;15:127. doi: 10.1186/1471-2164-15-127.

PMID:
24521294
[PubMed - in process]
Free PMC Article
7.

Prediction of IL4 inducing peptides.

Dhanda SK, Gupta S, Vir P, Raghava GP.

Clin Dev Immunol. 2013;2013:263952. doi: 10.1155/2013/263952. Epub 2013 Dec 30.

PMID:
24489573
[PubMed - in process]
Free PMC Article
8.

Genes involved in degradation of para-nitrophenol are differentially arranged in form of non-contiguous gene clusters in Burkholderia sp. strain SJ98.

Vikram S, Pandey J, Kumar S, Raghava GP.

PLoS One. 2013 Dec 23;8(12):e84766. doi: 10.1371/journal.pone.0084766. eCollection 2013.

PMID:
24376843
[PubMed - in process]
Free PMC Article
9.

Development of a model webserver for breed identification using microsatellite DNA marker.

Iquebal MA, Jaiswal S, Dhanda SK, Arora V, Dixit SP, Raghava GP, Rai A, Kumar D.

BMC Genet. 2013 Dec 9;14(1):118. [Epub ahead of print]

PMID:
24320218
[PubMed - as supplied by publisher]
Free PMC Article
10.

PHDcleav: a SVM based method for predicting human Dicer cleavage sites using sequence and secondary structure of miRNA precursors.

Ahmed F, Kaundal R, Raghava GP.

BMC Bioinformatics. 2013;14 Suppl 14:S9. doi: 10.1186/1471-2105-14-S14-S9. Epub 2013 Oct 9.

PMID:
24267009
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

DrugMint: a webserver for predicting and designing of drug-like molecules.

Dhanda SK, Singla D, Mondal AK, Raghava GP.

Biol Direct. 2013 Nov 5;8:28. doi: 10.1186/1745-6150-8-28.

PMID:
24188205
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Hemolytik: a database of experimentally determined hemolytic and non-hemolytic peptides.

Gautam A, Chaudhary K, Singh S, Joshi A, Anand P, Tuknait A, Mathur D, Varshney GC, Raghava GP.

Nucleic Acids Res. 2014 Jan;42(Database issue):D444-9. doi: 10.1093/nar/gkt1008. Epub 2013 Oct 29.

PMID:
24174543
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Identification of B-cell epitopes in an antigen for inducing specific class of antibodies.

Gupta S, Ansari HR, Gautam A; Open Source Drug Discovery Consortium, Raghava GP.

Biol Direct. 2013 Oct 30;8:27. doi: 10.1186/1745-6150-8-27.

PMID:
24168386
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

In silico approach for predicting toxicity of peptides and proteins.

Gupta S, Kapoor P, Chaudhary K, Gautam A, Kumar R; Open Source Drug Discovery Consortium, Raghava GP.

PLoS One. 2013 Sep 13;8(9):e73957. doi: 10.1371/journal.pone.0073957. eCollection 2013.

PMID:
24058508
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Genome annotation of Burkholderia sp. SJ98 with special focus on chemotaxis genes.

Kumar S, Vikram S, Raghava GP.

PLoS One. 2013 Aug 5;8(8):e70624. doi: 10.1371/journal.pone.0070624. Print 2013.

PMID:
23940608
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

lncRNome: a comprehensive knowledgebase of human long noncoding RNAs.

Bhartiya D, Pal K, Ghosh S, Kapoor S, Jalali S, Panwar B, Jain S, Sati S, Sengupta S, Sachidanandan C, Raghava GP, Sivasubbu S, Scaria V.

Database (Oxford). 2013 Jul 11;2013:bat034. doi: 10.1093/database/bat034. Print 2013.

PMID:
23846593
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

In silico platform for prediction of N-, O- and C-glycosites in eukaryotic protein sequences.

Chauhan JS, Rao A, Raghava GP.

PLoS One. 2013 Jun 28;8(6):e67008. doi: 10.1371/journal.pone.0067008. Print 2013.

PMID:
23840574
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Improved method for linear B-cell epitope prediction using antigen's primary sequence.

Singh H, Ansari HR, Raghava GP.

PLoS One. 2013 May 7;8(5):e62216. doi: 10.1371/journal.pone.0062216. Print 2013.

PMID:
23667458
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Draft Genome Sequence of Streptomyces gancidicus Strain BKS 13-15.

Kumar S, Kaur N, Singh NK, Raghava GP, Mayilraj S.

Genome Announc. 2013 Apr 18;1(2):e0015013. doi: 10.1128/genomeA.00150-13.

PMID:
23599292
[PubMed]
Free PMC Article
20.

Hybrid approach for predicting coreceptor used by HIV-1 from its V3 loop amino acid sequence.

Kumar R, Raghava GP.

PLoS One. 2013 Apr 15;8(4):e61437. doi: 10.1371/journal.pone.0061437. Print 2013.

PMID:
23596523
[PubMed - indexed for MEDLINE]
Free PMC Article

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