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Results: 1 to 20 of 25

1.

Issues with data transformation in genome-wide association studies for phenotypic variability.

Shen X, Rönnegård L.

F1000Res. 2013 Oct 2;2:200. doi: 10.12688/f1000research.2-200.v1. eCollection 2013.

PMID:
24555098
[PubMed]
Free PMC Article
2.

Exploring the potential of hierarchical generalized linear models in animal breeding and genetics.

Rönnegård L, Lee Y.

J Anim Breed Genet. 2013 Dec;130(6):415-6. doi: 10.1111/jbg.12059. No abstract available.

PMID:
24236603
[PubMed - in process]
3.

Genetic heterogeneity of within-family variance of body weight in Atlantic salmon (Salmo salar).

Sonesson AK, Odegård J, Rönnegård L.

Genet Sel Evol. 2013 Oct 17;45:41. doi: 10.1186/1297-9686-45-41.

PMID:
24134557
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

MAPfastR: quantitative trait loci mapping in outbred line crosses.

Nelson RM, Nettelblad C, Pettersson ME, Shen X, Crooks L, Besnier F, Alvarez-Castro JM, Rönnegård L, Ek W, Sheng Z, Kierczak M, Holmgren S, Carlborg O.

G3 (Bethesda). 2013 Dec 9;3(12):2147-9. doi: 10.1534/g3.113.008623.

PMID:
24122053
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Estimation of genetic variance for macro- and micro-environmental sensitivity using double hierarchical generalized linear models.

Mulder HA, Rönnegård L, Fikse WF, Veerkamp RF, Strandberg E.

Genet Sel Evol. 2013 Jul 4;45:23. doi: 10.1186/1297-9686-45-23.

PMID:
23827014
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Variance component and breeding value estimation for genetic heterogeneity of residual variance in Swedish Holstein dairy cattle.

Rönnegård L, Felleki M, Fikse WF, Mulder HA, Strandberg E.

J Dairy Sci. 2013 Apr;96(4):2627-36. doi: 10.3168/jds.2012-6198. Epub 2013 Feb 15.

PMID:
23415533
[PubMed - indexed for MEDLINE]
Free Article
7.

Estimation of breeding values for mean and dispersion, their variance and correlation using double hierarchical generalized linear models.

Felleki M, Lee D, Lee Y, Gilmour AR, Rönnegård L.

Genet Res (Camb). 2012 Dec;94(6):307-17. doi: 10.1017/S0016672312000766.

PMID:
23374241
[PubMed - indexed for MEDLINE]
8.

A novel generalized ridge regression method for quantitative genetics.

Shen X, Alam M, Fikse F, Rönnegård L.

Genetics. 2013 Apr;193(4):1255-68. doi: 10.1534/genetics.112.146720. Epub 2013 Jan 18.

PMID:
23335338
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Inheritance beyond plain heritability: variance-controlling genes in Arabidopsis thaliana.

Shen X, Pettersson M, Rönnegård L, Carlborg Ö.

PLoS Genet. 2012;8(8):e1002839. doi: 10.1371/journal.pgen.1002839. Epub 2012 Aug 2.

PMID:
22876191
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Recent developments in statistical methods for detecting genetic loci affecting phenotypic variability.

Rönnegård L, Valdar W.

BMC Genet. 2012 Jul 24;13:63. doi: 10.1186/1471-2156-13-63.

PMID:
22827487
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Estimation and interpretation of genetic effects with epistasis using the NOIA model.

Alvarez-Castro JM, Carlborg O, Rönnegård L.

Methods Mol Biol. 2012;871:191-204. doi: 10.1007/978-1-61779-785-9_10. Review.

PMID:
22565838
[PubMed - indexed for MEDLINE]
12.

How to deal with genotype uncertainty in variance component quantitative trait loci analyses.

Shen X, Rönnegård L, Carlborg O.

Genet Res (Camb). 2011 Oct;93(5):333-42. doi: 10.1017/S0016672311000152. Epub 2011 Jul 18.

PMID:
21767456
[PubMed - indexed for MEDLINE]
13.

Hierarchical likelihood opens a new way of estimating genetic values using genome-wide dense marker maps.

Shen X, Rönnegård L, Carlborg O.

BMC Proc. 2011 May 27;5 Suppl 3:S14. doi: 10.1186/1753-6561-5-S3-S14.

PMID:
21624170
[PubMed]
Free PMC Article
14.

Detecting major genetic loci controlling phenotypic variability in experimental crosses.

Rönnegård L, Valdar W.

Genetics. 2011 Jun;188(2):435-47. doi: 10.1534/genetics.111.127068. Epub 2011 Apr 5.

PMID:
21467569
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Fine mapping and replication of QTL in outbred chicken advanced intercross lines.

Besnier F, Wahlberg P, Rönnegård L, Ek W, Andersson L, Siegel PB, Carlborg O.

Genet Sel Evol. 2011 Jan 17;43(1):3. doi: 10.1186/1297-9686-43-3.

PMID:
21241486
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Genetic heterogeneity of residual variance - estimation of variance components using double hierarchical generalized linear models.

Rönnegård L, Felleki M, Fikse F, Mulder HA, Strandberg E.

Genet Sel Evol. 2010 Mar 19;42:8. doi: 10.1186/1297-9686-42-8.

PMID:
20302616
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Assessing a multiple QTL search using the variance component model.

Mishchenko K, Rönnegård L, Holmgren S, Mishchenko V.

Comput Biol Chem. 2010 Feb;34(1):34-41. doi: 10.1016/j.compbiolchem.2009.12.001. Epub 2009 Dec 21.

PMID:
20080064
[PubMed - indexed for MEDLINE]
18.

Modelling dominance in a flexible intercross analysis.

Rönnegård L, Besnier F, Carlborg O.

BMC Genet. 2009 Jun 28;10:30. doi: 10.1186/1471-2156-10-30.

PMID:
19558715
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Non-iterative variance component estimation in QTL analysis.

Rönnegård L, Al-Sarraj R, von Rosen D.

J Anim Breed Genet. 2009 Apr;126(2):110-6. doi: 10.1111/j.1439-0388.2008.00780.x.

PMID:
19320767
[PubMed - indexed for MEDLINE]
20.

An improved method for quantitative trait loci detection and identification of within-line segregation in F2 intercross designs.

Rönnegård L, Besnier F, Carlborg O.

Genetics. 2008 Apr;178(4):2315-26. doi: 10.1534/genetics.107.083162.

PMID:
18430952
[PubMed - indexed for MEDLINE]
Free PMC Article

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