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Results: 17

1.

Steady-State (13)C Fluxomics Using OpenFLUX.

Quek LE, Nielsen LK.

Methods Mol Biol. 2014;1191:209-24. doi: 10.1007/978-1-4939-1170-7_13.

PMID:
25178793
[PubMed - in process]
2.

Customization of (13)C-MFA Strategy According to Cell Culture System.

Quek LE, Nielsen LK.

Methods Mol Biol. 2014;1191:81-90. doi: 10.1007/978-1-4939-1170-7_5.

PMID:
25178785
[PubMed - in process]
3.

Escherichia coli W shows fast, highly oxidative sucrose metabolism and low acetate formation.

Arifin Y, Archer C, Lim S, Quek LE, Sugiarto H, Marcellin E, Vickers CE, Krömer JO, Nielsen LK.

Appl Microbiol Biotechnol. 2014 Aug 16. [Epub ahead of print]

PMID:
25125039
[PubMed - as supplied by publisher]
4.

A depth-first search algorithm to compute elementary flux modes by linear programming.

Quek LE, Nielsen LK.

BMC Syst Biol. 2014 Jul 30;8(1):94. [Epub ahead of print]

PMID:
25074068
[PubMed - as supplied by publisher]
Free Article
5.

Network thermodynamic curation of human and yeast genome-scale metabolic models.

Martínez VS, Quek LE, Nielsen LK.

Biophys J. 2014 Jul 15;107(2):493-503. doi: 10.1016/j.bpj.2014.05.029.

PMID:
25028891
[PubMed - in process]
6.

Reducing Recon 2 for steady-state flux analysis of HEK cell culture.

Quek LE, Dietmair S, Hanscho M, Martínez VS, Borth N, Nielsen LK.

J Biotechnol. 2014 Aug 20;184:172-8. doi: 10.1016/j.jbiotec.2014.05.021. Epub 2014 Jun 5.

PMID:
24907410
[PubMed - in process]
7.

Plant genome-scale modeling and implementation.

Dal'molin CG, Quek LE, Palfreyman RW, Nielsen LK.

Methods Mol Biol. 2014;1090:317-32. doi: 10.1007/978-1-62703-688-7_19.

PMID:
24222424
[PubMed - indexed for MEDLINE]
8.

Flux balance analysis of CHO cells before and after a metabolic switch from lactate production to consumption.

Martínez VS, Dietmair S, Quek LE, Hodson MP, Gray P, Nielsen LK.

Biotechnol Bioeng. 2013 Feb;110(2):660-6. doi: 10.1002/bit.24728. Epub 2012 Nov 5.

PMID:
22991240
[PubMed - indexed for MEDLINE]
9.

A multi-omics analysis of recombinant protein production in Hek293 cells.

Dietmair S, Hodson MP, Quek LE, Timmins NE, Gray P, Nielsen LK.

PLoS One. 2012;7(8):e43394. doi: 10.1371/journal.pone.0043394. Epub 2012 Aug 24.

PMID:
22937046
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Reconstruction of the Saccharopolyspora erythraea genome-scale model and its use for enhancing erythromycin production.

Licona-Cassani C, Marcellin E, Quek LE, Jacob S, Nielsen LK.

Antonie Van Leeuwenhoek. 2012 Oct;102(3):493-502. Epub 2012 Jul 31.

PMID:
22847261
[PubMed - indexed for MEDLINE]
11.

Metabolite profiling of CHO cells with different growth characteristics.

Dietmair S, Hodson MP, Quek LE, Timmins NE, Chrysanthopoulos P, Jacob SS, Gray P, Nielsen LK.

Biotechnol Bioeng. 2012 Jun;109(6):1404-14. doi: 10.1002/bit.24496. Epub 2012 Mar 30.

PMID:
22407794
[PubMed - indexed for MEDLINE]
12.

AlgaGEM--a genome-scale metabolic reconstruction of algae based on the Chlamydomonas reinhardtii genome.

Dal'Molin CG, Quek LE, Palfreyman RW, Nielsen LK.

BMC Genomics. 2011 Dec 22;12 Suppl 4:S5. doi: 10.1186/1471-2164-12-S4-S5. Epub 2011 Dec 22.

PMID:
22369158
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

C4GEM, a genome-scale metabolic model to study C4 plant metabolism.

Dal'Molin CG, Quek LE, Palfreyman RW, Brumbley SM, Nielsen LK.

Plant Physiol. 2010 Dec;154(4):1871-85. doi: 10.1104/pp.110.166488. Epub 2010 Oct 25.

PMID:
20974891
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis.

de Oliveira Dal'Molin CG, Quek LE, Palfreyman RW, Brumbley SM, Nielsen LK.

Plant Physiol. 2010 Feb;152(2):579-89. doi: 10.1104/pp.109.148817. Epub 2009 Dec 31.

PMID:
20044452
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Metabolic flux analysis in mammalian cell culture.

Quek LE, Dietmair S, Krömer JO, Nielsen LK.

Metab Eng. 2010 Mar;12(2):161-71. doi: 10.1016/j.ymben.2009.09.002. Epub 2009 Oct 13. Review.

PMID:
19833223
[PubMed - indexed for MEDLINE]
16.

OpenFLUX: efficient modelling software for 13C-based metabolic flux analysis.

Quek LE, Wittmann C, Nielsen LK, Krömer JO.

Microb Cell Fact. 2009 May 1;8:25. doi: 10.1186/1475-2859-8-25.

PMID:
19409084
[PubMed]
Free PMC Article
17.

On the reconstruction of the Mus musculus genome-scale metabolic network model.

Quek LE, Nielsen LK.

Genome Inform. 2008;21:89-100.

PMID:
19425150
[PubMed - indexed for MEDLINE]

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