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Items: 1 to 20 of 25

1.

Genome sequencing of the phytoseiid predatory mite Metaseiulus occidentalis reveals completely atomised Hox genes and super-dynamic intron evolution.

Hoy MA, Waterhouse RM, Wu K, Estep AS, Ioannidis P, Palmer WJ, Pomerantz AF, Simão FA, Thomas J, Jiggins FM, Murphy TD, Pritham EJ, Robertson HM, Zdobnov EM, Gibbs RA, Richards S.

Genome Biol Evol. 2016 Mar 6. pii: evw048. [Epub ahead of print]

2.

A Helitron transposon reconstructed from bats reveals a novel mechanism of genome shuffling in eukaryotes.

Grabundzija I, Messing SA, Thomas J, Cosby RL, Bilic I, Miskey C, Gogol-Döring A, Kapitonov V, Diem T, Dalda A, Jurka J, Pritham EJ, Dyda F, Izsvák Z, Ivics Z.

Nat Commun. 2016 Mar 2;7:10716. doi: 10.1038/ncomms10716.

3.

Helitrons, the Eukaryotic Rolling-circle Transposable Elements.

Thomas J, Pritham EJ.

Microbiol Spectr. 2015 Aug;3(4). doi: 10.1128/microbiolspec.MDNA3-0049-2014. Review.

PMID:
26350323
4.

Rolling-circle transposons catalyze genomic innovation in a mammalian lineage.

Thomas J, Phillips CD, Baker RJ, Pritham EJ.

Genome Biol Evol. 2014 Sep 14;6(10):2595-610. doi: 10.1093/gbe/evu204.

5.
6.

Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs.

Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, Maruyama S, Arias MC, Ball SG, Gile GH, Hirakawa Y, Hopkins JF, Kuo A, Rensing SA, Schmutz J, Symeonidi A, Elias M, Eveleigh RJ, Herman EK, Klute MJ, Nakayama T, Oborník M, Reyes-Prieto A, Armbrust EV, Aves SJ, Beiko RG, Coutinho P, Dacks JB, Durnford DG, Fast NM, Green BR, Grisdale CJ, Hempel F, Henrissat B, Höppner MP, Ishida K, Kim E, Kořený L, Kroth PG, Liu Y, Malik SB, Maier UG, McRose D, Mock T, Neilson JA, Onodera NT, Poole AM, Pritham EJ, Richards TA, Rocap G, Roy SW, Sarai C, Schaack S, Shirato S, Slamovits CH, Spencer DF, Suzuki S, Worden AZ, Zauner S, Barry K, Bell C, Bharti AK, Crow JA, Grimwood J, Kramer R, Lindquist E, Lucas S, Salamov A, McFadden GI, Lane CE, Keeling PJ, Gray MW, Grigoriev IV, Archibald JM.

Nature. 2012 Dec 6;492(7427):59-65. doi: 10.1038/nature11681. Epub 2012 Nov 28.

PMID:
23201678
7.

The ecoresponsive genome of Daphnia pulex.

Colbourne JK, Pfrender ME, Gilbert D, Thomas WK, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK, Bauer DJ, Cáceres CE, Carmel L, Casola C, Choi JH, Detter JC, Dong Q, Dusheyko S, Eads BD, Fröhlich T, Geiler-Samerotte KA, Gerlach D, Hatcher P, Jogdeo S, Krijgsveld J, Kriventseva EV, Kültz D, Laforsch C, Lindquist E, Lopez J, Manak JR, Muller J, Pangilinan J, Patwardhan RP, Pitluck S, Pritham EJ, Rechtsteiner A, Rho M, Rogozin IB, Sakarya O, Salamov A, Schaack S, Shapiro H, Shiga Y, Skalitzky C, Smith Z, Souvorov A, Sung W, Tang Z, Tsuchiya D, Tu H, Vos H, Wang M, Wolf YI, Yamagata H, Yamada T, Ye Y, Shaw JR, Andrews J, Crease TJ, Tang H, Lucas SM, Robertson HM, Bork P, Koonin EV, Zdobnov EM, Grigoriev IV, Lynch M, Boore JL.

Science. 2011 Feb 4;331(6017):555-61. doi: 10.1126/science.1197761.

8.

The limited distribution of Helitrons to vesper bats supports horizontal transfer.

Thomas J, Sorourian M, Ray D, Baker RJ, Pritham EJ.

Gene. 2011 Mar 15;474(1-2):52-8. doi: 10.1016/j.gene.2010.12.007. Epub 2010 Dec 28.

PMID:
21193022
9.

Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics.

Arensburger P, Megy K, Waterhouse RM, Abrudan J, Amedeo P, Antelo B, Bartholomay L, Bidwell S, Caler E, Camara F, Campbell CL, Campbell KS, Casola C, Castro MT, Chandramouliswaran I, Chapman SB, Christley S, Costas J, Eisenstadt E, Feschotte C, Fraser-Liggett C, Guigo R, Haas B, Hammond M, Hansson BS, Hemingway J, Hill SR, Howarth C, Ignell R, Kennedy RC, Kodira CD, Lobo NF, Mao C, Mayhew G, Michel K, Mori A, Liu N, Naveira H, Nene V, Nguyen N, Pearson MD, Pritham EJ, Puiu D, Qi Y, Ranson H, Ribeiro JM, Roberston HM, Severson DW, Shumway M, Stanke M, Strausberg RL, Sun C, Sutton G, Tu ZJ, Tubio JM, Unger MF, Vanlandingham DL, Vilella AJ, White O, White JR, Wondji CS, Wortman J, Zdobnov EM, Birren B, Christensen BM, Collins FH, Cornel A, Dimopoulos G, Hannick LI, Higgs S, Lanzaro GC, Lawson D, Lee NH, Muskavitch MA, Raikhel AS, Atkinson PW.

Science. 2010 Oct 1;330(6000):86-8. doi: 10.1126/science.1191864.

10.

Pervasive horizontal transfer of rolling-circle transposons among animals.

Thomas J, Schaack S, Pritham EJ.

Genome Biol Evol. 2010;2:656-64. doi: 10.1093/gbe/evq050. Epub 2010 Aug 6.

11.

Phantom, a new subclass of Mutator DNA transposons found in insect viruses and widely distributed in animals.

Marquez CP, Pritham EJ.

Genetics. 2010 Aug;185(4):1507-17. doi: 10.1534/genetics.110.116673. Epub 2010 May 10.

12.

DNA transposons and the role of recombination in mutation accumulation in Daphnia pulex.

Schaack S, Choi E, Lynch M, Pritham EJ.

Genome Biol. 2010;11(4):R46. doi: 10.1186/gb-2010-11-4-r46. Epub 2010 Apr 30.

13.

DNA transposon dynamics in populations of Daphnia pulex with and without sex.

Schaack S, Pritham EJ, Wolf A, Lynch M.

Proc Biol Sci. 2010 Aug 7;277(1692):2381-7. doi: 10.1098/rspb.2009.2253. Epub 2010 Mar 31.

14.

A cornucopia of Helitrons shapes the maize genome.

Feschotte C, Pritham EJ.

Proc Natl Acad Sci U S A. 2009 Nov 24;106(47):19747-8. doi: 10.1073/pnas.0910273106. Epub 2009 Nov 19. No abstract available.

15.

Transposable elements and factors influencing their success in eukaryotes.

Pritham EJ.

J Hered. 2009 Sep-Oct;100(5):648-55. doi: 10.1093/jhered/esp065. Epub 2009 Aug 7. Review.

16.

Evolution of the Schlafen genes, a gene family associated with embryonic lethality, meiotic drive, immune processes and orthopoxvirus virulence.

Bustos O, Naik S, Ayers G, Casola C, Perez-Lamigueiro MA, Chippindale PT, Pritham EJ, de la Casa-Esperón E.

Gene. 2009 Nov 1;447(1):1-11. doi: 10.1016/j.gene.2009.07.006. Epub 2009 Jul 17.

PMID:
19619625
17.

Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus.

Ray DA, Feschotte C, Pagan HJ, Smith JD, Pritham EJ, Arensburger P, Atkinson PW, Craig NL.

Genome Res. 2008 May;18(5):717-28. doi: 10.1101/gr.071886.107. Epub 2008 Mar 13.

18.

DNA transposons and the evolution of eukaryotic genomes.

Feschotte C, Pritham EJ.

Annu Rev Genet. 2007;41:331-68. Review.

19.

Massive amplification of rolling-circle transposons in the lineage of the bat Myotis lucifugus.

Pritham EJ, Feschotte C.

Proc Natl Acad Sci U S A. 2007 Feb 6;104(6):1895-900. Epub 2007 Jan 29.

20.

Mavericks, a novel class of giant transposable elements widespread in eukaryotes and related to DNA viruses.

Pritham EJ, Putliwala T, Feschotte C.

Gene. 2007 Apr 1;390(1-2):3-17. Epub 2006 Aug 23.

PMID:
17034960
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