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Items: 1 to 20 of 76

1.

The mammalian complement system as an epitome of host-pathogen genetic conflicts.

Cagliani R, Forni D, Filippi G, Mozzi A, De Gioia L, Pontremoli C, Pozzoli U, Bresolin N, Clerici M, Sironi M.

Mol Ecol. 2016 Feb 2. doi: 10.1111/mec.13558. [Epub ahead of print]

PMID:
26836579
2.

Serotonin Transporter Gene (SLC6A4) Methylation Associates With Neonatal Intensive Care Unit Stay and 3-Month-Old Temperament in Preterm Infants.

Montirosso R, Provenzi L, Fumagalli M, Sirgiovanni I, Giorda R, Pozzoli U, Beri S, Menozzi G, Tronick E, Morandi F, Mosca F, Borgatti R.

Child Dev. 2016 Jan;87(1):38-48. doi: 10.1111/cdev.12492.

PMID:
26822441
3.

Extensive positive selection drives the evolution of non-structural proteins in lineage C Betacoronaviruses.

Forni D, Cagliani R, Mozzi A, Pozzoli U, Al-Daghri N, Clerici M, Sironi M.

J Virol. 2016 Jan 20. pii: JVI.02988-15. [Epub ahead of print]

PMID:
26792741
4.

The heptad repeat region is a major selection target in MERS-CoV and related coronaviruses.

Forni D, Filippi G, Cagliani R, De Gioia L, Pozzoli U, Al-Daghri N, Clerici M, Sironi M.

Sci Rep. 2015 Sep 25;5:14480. doi: 10.1038/srep14480.

5.

Natural Selection at the Brush-Border: Adaptations to Carbohydrate Diets in Humans and Other Mammals.

Pontremoli C, Mozzi A, Forni D, Cagliani R, Pozzoli U, Menozzi G, Vertemara J, Bresolin N, Clerici M, Sironi M.

Genome Biol Evol. 2015 Aug 28;7(9):2569-84. doi: 10.1093/gbe/evv166.

6.

Positive selection underlies the species-specific binding of Plasmodium falciparum RH5 to human basigin.

Forni D, Pontremoli C, Cagliani R, Pozzoli U, Clerici M, Sironi M.

Mol Ecol. 2015 Sep;24(18):4711-22. doi: 10.1111/mec.13354. Epub 2015 Sep 7.

PMID:
26302433
7.

Pain-related stress during the Neonatal Intensive Care Unit stay and SLC6A4 methylation in very preterm infants.

Provenzi L, Fumagalli M, Sirgiovanni I, Giorda R, Pozzoli U, Morandi F, Beri S, Menozzi G, Mosca F, Borgatti R, Montirosso R.

Front Behav Neurosci. 2015 Apr 21;9:99. doi: 10.3389/fnbeh.2015.00099. eCollection 2015.

8.

Diverse selective regimes shape genetic diversity at ADAR genes and at their coding targets.

Forni D, Mozzi A, Pontremoli C, Vertemara J, Pozzoli U, Biasin M, Bresolin N, Clerici M, Cagliani R, Sironi M.

RNA Biol. 2015;12(2):149-61. doi: 10.1080/15476286.2015.1017215.

PMID:
25826567
9.

OASes and STING: adaptive evolution in concert.

Mozzi A, Pontremoli C, Forni D, Clerici M, Pozzoli U, Bresolin N, Cagliani R, Sironi M.

Genome Biol Evol. 2015 Mar 9;7(4):1016-32. doi: 10.1093/gbe/evv046.

10.

Genetic adaptation of the human circadian clock to day-length latitudinal variations and relevance for affective disorders.

Forni D, Pozzoli U, Cagliani R, Tresoldi C, Menozzi G, Riva S, Guerini FR, Comi GP, Bolognesi E, Bresolin N, Clerici M, Sironi M.

Genome Biol. 2014;15(10):499.

11.

Albuminoid genes: evolving at the interface of dispensability and selection.

Mozzi A, Forni D, Cagliani R, Pozzoli U, Vertemara J, Bresolin N, Sironi M.

Genome Biol Evol. 2014 Oct 27;6(11):2983-97. doi: 10.1093/gbe/evu235.

12.

Evolutionary analysis identifies an MX2 haplotype associated with natural resistance to HIV-1 infection.

Sironi M, Biasin M, Cagliani R, Gnudi F, Saulle I, Ibba S, Filippi G, Yahyaei S, Tresoldi C, Riva S, Trabattoni D, De Gioia L, Lo Caputo S, Mazzotta F, Forni D, Pontremoli C, Pineda JA, Pozzoli U, Rivero-Juarez A, Caruz A, Clerici M.

Mol Biol Evol. 2014 Sep;31(9):2402-14. doi: 10.1093/molbev/msu193. Epub 2014 Jun 14.

13.

Ancient and recent selective pressures shaped genetic diversity at AIM2-like nucleic acid sensors.

Cagliani R, Forni D, Biasin M, Comabella M, Guerini FR, Riva S, Pozzoli U, Agliardi C, Caputo D, Malhotra S, Montalban X, Bresolin N, Clerici M, Sironi M.

Genome Biol Evol. 2014 Apr;6(4):830-45. doi: 10.1093/gbe/evu066.

14.

An evolutionary analysis of antigen processing and presentation across different timescales reveals pervasive selection.

Forni D, Cagliani R, Tresoldi C, Pozzoli U, De Gioia L, Filippi G, Riva S, Menozzi G, Colleoni M, Biasin M, Lo Caputo S, Mazzotta F, Comi GP, Bresolin N, Clerici M, Sironi M.

PLoS Genet. 2014 Mar 27;10(3):e1004189. doi: 10.1371/journal.pgen.1004189. eCollection 2014 Mar.

15.

RNAmotifs: prediction of multivalent RNA motifs that control alternative splicing.

Cereda M, Pozzoli U, Rot G, Juvan P, Schweitzer A, Clark T, Ule J.

Genome Biol. 2014 Jan 31;15(1):R20. doi: 10.1186/gb-2014-15-1-r20.

16.

RIG-I-like receptors evolved adaptively in mammals, with parallel evolution at LGP2 and RIG-I.

Cagliani R, Forni D, Tresoldi C, Pozzoli U, Filippi G, Rainone V, De Gioia L, Clerici M, Sironi M.

J Mol Biol. 2014 Mar 20;426(6):1351-65. doi: 10.1016/j.jmb.2013.10.040. Epub 2013 Nov 7.

PMID:
24211720
17.

A 175 million year history of T cell regulatory molecules reveals widespread selection, with adaptive evolution of disease alleles.

Forni D, Cagliani R, Pozzoli U, Colleoni M, Riva S, Biasin M, Filippi G, De Gioia L, Gnudi F, Comi GP, Bresolin N, Clerici M, Sironi M.

Immunity. 2013 Jun 27;38(6):1129-41. doi: 10.1016/j.immuni.2013.04.008. Epub 2013 May 23.

18.

Evolutionary analysis of the contact system indicates that kininogen evolved adaptively in mammals and in human populations.

Cagliani R, Forni D, Riva S, Pozzoli U, Colleoni M, Bresolin N, Clerici M, Sironi M.

Mol Biol Evol. 2013 Jun;30(6):1397-408. doi: 10.1093/molbev/mst054. Epub 2013 Mar 16.

19.

Long-standing balancing selection in the THBS4 gene: influence on sex-specific brain expression and gray matter volumes in Alzheimer disease.

Cagliani R, Guerini FR, Rubio-Acero R, Baglio F, Forni D, Agliardi C, Griffanti L, Fumagalli M, Pozzoli U, Riva S, Calabrese E, Sikora M, Casals F, Comi GP, Bresolin N, C√°ceres M, Clerici M, Sironi M.

Hum Mutat. 2013 May;34(5):743-53. doi: 10.1002/humu.22301. Epub 2013 Apr 2.

PMID:
23420636
20.

Crohn's disease loci are common targets of protozoa-driven selection.

Cagliani R, Pozzoli U, Forni D, Cassinotti A, Fumagalli M, Giani M, Fichera M, Lombardini M, Ardizzone S, Asselta R, de Franchis R, Riva S, Biasin M, Comi GP, Bresolin N, Clerici M, Sironi M.

Mol Biol Evol. 2013 May;30(5):1077-87. doi: 10.1093/molbev/mst020. Epub 2013 Feb 6.

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