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Results: 1 to 20 of 107

1.

Cancer Molecular Evolution.

Posada D.

J Mol Evol. 2015 Aug 20. [Epub ahead of print] No abstract available.

PMID:
26289731
2.

Flow-induced 2D protein crystallization: characterization of the coupled interfacial and bulk flows.

Young JE, Posada D, Lopez JM, Hirsa AH.

Soft Matter. 2015 May 14;11(18):3618-28. doi: 10.1039/c5sm00429b.

PMID:
25805062
3.

CodABC: a computational framework to coestimate recombination, substitution, and molecular adaptation rates by approximate Bayesian computation.

Arenas M, Lopes JS, Beaumont MA, Posada D.

Mol Biol Evol. 2015 Apr;32(4):1109-12. doi: 10.1093/molbev/msu411. Epub 2015 Jan 9.

4.

A Bayesian Supertree Model for Genome-Wide Species Tree Reconstruction.

De Oliveira Martins L, Mallo D, Posada D.

Syst Biol. 2014 Oct 3. pii: syu082. [Epub ahead of print]

PMID:
25281847
5.

HIV epidemiology. The early spread and epidemic ignition of HIV-1 in human populations.

Faria NR, Rambaut A, Suchard MA, Baele G, Bedford T, Ward MJ, Tatem AJ, Sousa JD, Arinaminpathy N, Pépin J, Posada D, Peeters M, Pybus OG, Lemey P.

Science. 2014 Oct 3;346(6205):56-61. doi: 10.1126/science.1256739. Epub 2014 Oct 2.

6.

The inversion of the Control Region in three mitogenomes provides further evidence for an asymmetric model of vertebrate mtDNA replication.

Fonseca MM, Harris DJ, Posada D.

PLoS One. 2014 Sep 30;9(9):e106654. doi: 10.1371/journal.pone.0106654. eCollection 2014.

7.

Unsorted homology within locus and species trees.

Mallo D, De Oliveira Martins L, Posada D.

Syst Biol. 2014 Nov;63(6):988-92. doi: 10.1093/sysbio/syu050. Epub 2014 Jul 30. No abstract available.

PMID:
25077514
8.

Testing for universal common ancestry.

de Oliveira Martins L, Posada D.

Syst Biol. 2014 Sep;63(5):838-42. doi: 10.1093/sysbio/syu041. Epub 2014 Jun 23. No abstract available.

PMID:
24958930
9.

The evolution and appearance of C3 duplications in fish originate an exclusive teleost c3 gene form with anti-inflammatory activity.

Forn-Cuní G, Reis ES, Dios S, Posada D, Lambris JD, Figueras A, Novoa B.

PLoS One. 2014 Jun 13;9(6):e99673. doi: 10.1371/journal.pone.0099673. eCollection 2014.

10.

Simulation of genome-wide evolution under heterogeneous substitution models and complex multispecies coalescent histories.

Arenas M, Posada D.

Mol Biol Evol. 2014 May;31(5):1295-301. doi: 10.1093/molbev/msu078. Epub 2014 Feb 19.

11.

jmodeltest.org: selection of nucleotide substitution models on the cloud.

Santorum JM, Darriba D, Taboada GL, Posada D.

Bioinformatics. 2014 May 1;30(9):1310-1. doi: 10.1093/bioinformatics/btu032. Epub 2014 Jan 21.

12.

Origin and length distribution of unidirectional prokaryotic overlapping genes.

Fonseca MM, Harris DJ, Posada D.

G3 (Bethesda). 2014 Jan 10;4(1):19-27. doi: 10.1534/g3.113.005652.

13.

Coestimation of recombination, substitution and molecular adaptation rates by approximate Bayesian computation.

Lopes JS, Arenas M, Posada D, Beaumont MA.

Heredity (Edinb). 2014 Mar;112(3):255-64. doi: 10.1038/hdy.2013.101. Epub 2013 Oct 23.

14.

Protein evolution along phylogenetic histories under structurally constrained substitution models.

Arenas M, Dos Santos HG, Posada D, Bastolla U.

Bioinformatics. 2013 Dec 1;29(23):3020-8. doi: 10.1093/bioinformatics/btt530. Epub 2013 Sep 12.

15.

Phylogenetic models of molecular evolution: next-generation data, fit, and performance.

Posada D.

J Mol Evol. 2013 Jun;76(6):351-2. doi: 10.1007/s00239-013-9566-z. Epub 2013 May 22. No abstract available.

PMID:
23695649
16.

Phylogeography and diversification history of the day-gecko genus Phelsuma in the Seychelles islands.

Rocha S, Posada D, Harris DJ.

BMC Evol Biol. 2013 Jan 5;13:3. doi: 10.1186/1471-2148-13-3.

17.

Insights into origins of Human T-cell Lymphotropic Virus Type 1 based on new strains from aboriginal people of Canada.

Andonov A, Coulthart MB, Pérez-Losada M, Crandall KA, Posada D, Padmore R, Giulivi A, Oger JJ, Peters AA, Dekaban GA.

Infect Genet Evol. 2012 Dec;12(8):1822-30. doi: 10.1016/j.meegid.2012.07.015. Epub 2012 Aug 13.

PMID:
22921499
18.

jModelTest 2: more models, new heuristics and parallel computing.

Darriba D, Taboada GL, Doallo R, Posada D.

Nat Methods. 2012 Jul 30;9(8):772. doi: 10.1038/nmeth.2109. No abstract available.

PMID:
22847109
19.

Base-pairing versatility determines wobble sites in tRNA anticodons of vertebrate mitogenomes.

Fonseca MM, Rocha S, Posada D.

PLoS One. 2012;7(5):e36605. doi: 10.1371/journal.pone.0036605. Epub 2012 May 9.

20.

Proving universal common ancestry with similar sequences.

Martins LD, Posada D.

Trends Evol Biol. 2012 May 9;4(1). pii: e5.

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