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Characterization of endophytic bacteria from cucurbit fruits with potential benefits to agriculture in melons (Cucumis melo L.).

Glassner H, Zchori-Fein E, Compant S, Sessitsch A, Katzir N, Portnoy V, Yaron S.

FEMS Microbiol Ecol. 2015 Jul;91(7). pii: fiv074. doi: 10.1093/femsec/fiv074. Epub 2015 Jul 15.


Adaptive Evolution of Thermotoga maritima Reveals Plasticity of the ABC Transporter Network.

Latif H, Sahin M, Tarasova J, Tarasova Y, Portnoy VA, Nogales J, Zengler K.

Appl Environ Microbiol. 2015 Aug 15;81(16):5477-85. doi: 10.1128/AEM.01365-15. Epub 2015 Jun 5.


Systems approach for exploring the intricate associations between sweetness, color and aroma in melon fruits.

Freilich S, Lev S, Gonda I, Reuveni E, Portnoy V, Oren E, Lohse M, Galpaz N, Bar E, Tzuri G, Wissotsky G, Meir A, Burger J, Tadmor Y, Schaffer A, Fei Z, Giovannoni J, Lewinsohn E, Katzir N.

BMC Plant Biol. 2015 Mar 3;15:71. doi: 10.1186/s12870-015-0449-x.


Inducing gene expression by targeting promoter sequences using small activating RNAs.

Wang J, Place RF, Portnoy V, Huang V, Kang MR, Kosaka M, Ho MK, Li LC.

J Biol Methods. 2015 Mar 11;2(1). pii: e14.


A 'golden' SNP in CmOr governs the fruit flesh color of melon (Cucumis melo).

Tzuri G, Zhou X, Chayut N, Yuan H, Portnoy V, Meir A, Sa'ar U, Baumkoler F, Mazourek M, Lewinsohn E, Fei Z, Schaffer AA, Li L, Burger J, Katzir N, Tadmor Y.

Plant J. 2015 Apr;82(2):267-79. doi: 10.1111/tpj.12814. Erratum in: Plant J. 2015 Sep;83(5):940.


Recombinant yeast as a functional tool for understanding bitterness and cucurbitacin biosynthesis in watermelon (Citrullus spp.).

Davidovich-Rikanati R, Shalev L, Baranes N, Meir A, Itkin M, Cohen S, Zimbler K, Portnoy V, Ebizuka Y, Shibuya M, Burger Y, Katzir N, Schaffer AA, Lewinsohn E, Tadmor Y.

Yeast. 2015 Jan;32(1):103-14. doi: 10.1002/yea.3049. Epub 2014 Nov 20.


The PH gene determines fruit acidity and contributes to the evolution of sweet melons.

Cohen S, Itkin M, Yeselson Y, Tzuri G, Portnoy V, Harel-Baja R, Lev S, Sa'ar U, Davidovitz-Rikanati R, Baranes N, Bar E, Wolf D, Petreikov M, Shen S, Ben-Dor S, Rogachev I, Aharoni A, Ast T, Schuldiner M, Belausov E, Eshed R, Ophir R, Sherman A, Frei B, Neuhaus HE, Xu Y, Fei Z, Giovannoni J, Lewinsohn E, Tadmor Y, Paris HS, Katzir N, Burger Y, Schaffer AA.

Nat Commun. 2014 Jun 5;5:4026. doi: 10.1038/ncomms5026.


Transcriptional regulation of the carbohydrate utilization network in Thermotoga maritima.

Rodionov DA, Rodionova IA, Li X, Ravcheev DA, Tarasova Y, Portnoy VA, Zengler K, Osterman AL.

Front Microbiol. 2013 Aug 23;4:244. doi: 10.3389/fmicb.2013.00244. eCollection 2013.


Genetic and chemical characterization of an EMS induced mutation in Cucumis melo CRTISO gene.

Galpaz N, Burger Y, Lavee T, Tzuri G, Sherman A, Melamed T, Eshed R, Meir A, Portnoy V, Bar E, Shimoni-Shor E, Feder A, Saar Y, Saar U, Baumkoler F, Lewinsohn E, Schaffer AA, Katzir N, Tadmor Y.

Arch Biochem Biophys. 2013 Nov 15;539(2):117-25. doi: 10.1016/ Epub 2013 Aug 21.


The genome organization of Thermotoga maritima reflects its lifestyle.

Latif H, Lerman JA, Portnoy VA, Tarasova Y, Nagarajan H, Schrimpe-Rutledge AC, Smith RD, Adkins JN, Lee DH, Qiu Y, Zengler K.

PLoS Genet. 2013 Apr;9(4):e1003485. doi: 10.1371/journal.pgen.1003485. Epub 2013 Apr 25.


Catabolism of L-methionine in the formation of sulfur and other volatiles in melon (Cucumis melo L.) fruit.

Gonda I, Lev S, Bar E, Sikron N, Portnoy V, Davidovich-Rikanati R, Burger J, Schaffer AA, Tadmor Y, Giovannonni JJ, Huang M, Fei Z, Katzir N, Fait A, Lewinsohn E.

Plant J. 2013 May;74(3):458-72. doi: 10.1111/tpj.12149. Epub 2013 Mar 22.


Combining bulk segregation analysis and microarrays for mapping of the pH trait in melon.

Sherman A, Eshed R, Harel-Beja R, Tzuri G, Portnoy V, Cohen S, Rubinstein M, Schaffer AA, Burger J, Katzir N, Ophir R.

Theor Appl Genet. 2013 Feb;126(2):349-58. doi: 10.1007/s00122-012-1983-7. Epub 2012 Oct 16.


In silico method for modelling metabolism and gene product expression at genome scale.

Lerman JA, Hyduke DR, Latif H, Portnoy VA, Lewis NE, Orth JD, Schrimpe-Rutledge AC, Smith RD, Adkins JN, Zengler K, Palsson BO.

Nat Commun. 2012 Jul 3;3:929. doi: 10.1038/ncomms1928.


Co-mapping studies of QTLs for fruit acidity and candidate genes of organic acid metabolism and proton transport in sweet melon (Cucumis melo L.).

Cohen S, Tzuri G, Harel-Beja R, Itkin M, Portnoy V, Sa'ar U, Lev S, Yeselson L, Petrikov M, Rogachev I, Aharoni A, Ophir R, Tadmor Y, Lewinsohn E, Burger Y, Katzir N, Schaffer AA.

Theor Appl Genet. 2012 Jul;125(2):343-53. doi: 10.1007/s00122-012-1837-3. Epub 2012 Mar 10.


Predicting outcomes of steady-state ¹³C isotope tracing experiments using Monte Carlo sampling.

Schellenberger J, Zielinski DC, Choi W, Madireddi S, Portnoy V, Scott DA, Reed JL, Osterman AL, Palsson B.

BMC Syst Biol. 2012 Jan 30;6:9. doi: 10.1186/1752-0509-6-9.


Horizontal transmission of the insect symbiont Rickettsia is plant-mediated.

Caspi-Fluger A, Inbar M, Mozes-Daube N, Katzir N, Portnoy V, Belausov E, Hunter MS, Zchori-Fein E.

Proc Biol Sci. 2012 May 7;279(1734):1791-6. doi: 10.1098/rspb.2011.2095. Epub 2011 Nov 23.


Upregulation of Cyclin B1 by miRNA and its implications in cancer.

Huang V, Place RF, Portnoy V, Wang J, Qi Z, Jia Z, Yu A, Shuman M, Yu J, Li LC.

Nucleic Acids Res. 2012 Feb;40(4):1695-707. doi: 10.1093/nar/gkr934. Epub 2011 Nov 3.


Distinct activities of several RNase J proteins in methanogenic archaea.

Levy S, Portnoy V, Admon J, Schuster G.

RNA Biol. 2011 Nov-Dec;8(6):1073-83. doi: 10.4161/rna.8.6.16604. Epub 2011 Nov 1.


Small RNA and transcriptional upregulation.

Portnoy V, Huang V, Place RF, Li LC.

Wiley Interdiscip Rev RNA. 2011 Sep-Oct;2(5):748-60. doi: 10.1002/wrna.90. Epub 2011 May 2. Review.


A consensus linkage map for molecular markers and quantitative trait loci associated with economically important traits in melon (Cucumis melo L.).

Diaz A, Fergany M, Formisano G, Ziarsolo P, Blanca J, Fei Z, Staub JE, Zalapa JE, Cuevas HE, Dace G, Oliver M, Boissot N, Dogimont C, Pitrat M, Hofstede R, van Koert P, Harel-Beja R, Tzuri G, Portnoy V, Cohen S, Schaffer A, Katzir N, Xu Y, Zhang H, Fukino N, Matsumoto S, Garcia-Mas J, Monforte AJ.

BMC Plant Biol. 2011 Jul 28;11:111. doi: 10.1186/1471-2229-11-111.

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