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Items: 7


Microbase2.0: a generic framework for computationally intensive bioinformatics workflows in the cloud.

Flanagan K, Nakjang S, Hallinan J, Harwood C, Hirt RP, Pocock MR, Wipat A.

J Integr Bioinform. 2012 Sep 24;9(2):212. doi: 10.2390/biecoll-jib-2012-212.


Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data.

Li P, Castrillo JI, Velarde G, Wassink I, Soiland-Reyes S, Owen S, Withers D, Oinn T, Pocock MR, Goble CA, Oliver SG, Kell DB.

BMC Bioinformatics. 2008 Aug 7;9:334. doi: 10.1186/1471-2105-9-334.


Taverna: a tool for building and running workflows of services.

Hull D, Wolstencroft K, Stevens R, Goble C, Pocock MR, Li P, Oinn T.

Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W729-32.


Taverna: a tool for the composition and enactment of bioinformatics workflows.

Oinn T, Addis M, Ferris J, Marvin D, Senger M, Greenwood M, Carver T, Glover K, Pocock MR, Wipat A, Li P.

Bioinformatics. 2004 Nov 22;20(17):3045-54. Epub 2004 Jun 16.


The Bioperl toolkit: Perl modules for the life sciences.

Stajich JE, Block D, Boulez K, Brenner SE, Chervitz SA, Dagdigian C, Fuellen G, Gilbert JG, Korf I, Lapp H, Lehväslaiho H, Matsalla C, Mungall CJ, Osborne BI, Pocock MR, Schattner P, Senger M, Stein LD, Stupka E, Wilkinson MD, Birney E.

Genome Res. 2002 Oct;12(10):1611-8.


A browser for expression data.

Pocock MR, Hubbard TJ.

Bioinformatics. 2000 Apr;16(4):402-3.


SPEM: a parser for EMBL style flat file database entries.

Pocock MR, Hubbard T, Birney E.

Bioinformatics. 1998;14(9):823-4. Review.

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