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Results: 1 to 20 of 262

1.

High-Quality Draft Genome Sequence of Desulfovibrio carbinoliphilus FW-101-2B, an Organic Acid-Oxidizing Sulfate-Reducing Bacterium Isolated from Uranium(VI)-Contaminated Groundwater.

Ramsay BD, Hwang C, Woo HL, Carroll SL, Lucas S, Han J, Lapidus AL, Cheng JF, Goodwin LA, Pitluck S, Peters L, Chertkov O, Held B, Detter JC, Han CS, Tapia R, Land ML, Hauser LJ, Kyrpides NC, Ivanova NN, Mikhailova N, Pagani I, Woyke T, Arkin AP, Dehal P, Chivian D, Criddle CS, Wu W, Chakraborty R, Hazen TC, Fields MW.

Genome Announc. 2015 Mar 12;3(2). pii: e00092-15. doi: 10.1128/genomeA.00092-15.

2.

Complete Genome Sequence of Anaeromyxobacter sp. Fw109-5, an Anaerobic, Metal-Reducing Bacterium Isolated from a Contaminated Subsurface Environment.

Hwang C, Copeland A, Lucas S, Lapidus A, Barry K, Glavina Del Rio T, Dalin E, Tice H, Pitluck S, Sims D, Brettin T, Bruce DC, Detter JC, Han CS, Schmutz J, Larimer FW, Land ML, Hauser LJ, Kyrpides N, Lykidis A, Richardson P, Belieav A, Sanford RA, Löeffler FE, Fields MW.

Genome Announc. 2015 Jan 22;3(1). pii: e01449-14. doi: 10.1128/genomeA.01449-14.

3.

Genome sequence of the Thermotoga thermarum type strain (LA3(T)) from an African solfataric spring.

Göker M, Spring S, Scheuner C, Anderson I, Zeytun A, Nolan M, Lucas S, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin LA, Pitluck S, Liolios K, Mavromatis K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Rohde M, Detter JC, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Lapidus A.

Stand Genomic Sci. 2014 May 15;9(3):1105-17. doi: 10.4056/sigs.3016383. eCollection 2014 Jun 15.

4.

Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279(T)), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia.

Göker M, Lu M, Fiebig A, Nolan M, Lapidus A, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin LA, Pitluck S, Liolios K, Mavromatis K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Mayilraj S, Rohde M, Detter JC, Bunk B, Spring S, Wirth R, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2014 Mar 15;9(3):1076-88. doi: 10.4056/sigs.5138968. eCollection 2014 Jun 15.

5.

Complete Genome sequence of Burkholderia phymatum STM815(T), a broad host range and efficient nitrogen-fixing symbiont of Mimosa species.

Moulin L, Klonowska A, Caroline B, Booth K, Vriezen JA, Melkonian R, James EK, Young JP, Bena G, Hauser L, Land M, Kyrpides N, Bruce D, Chain P, Copeland A, Pitluck S, Woyke T, Lizotte-Waniewski M, Bristow J, Riley M.

Stand Genomic Sci. 2014 Mar 25;9(3):763-74. doi: 10.4056/sigs.4861021. eCollection 2014 Jun 15.

6.

Complete genome sequence of Anabaena variabilis ATCC 29413.

Thiel T, Pratte BS, Zhong J, Goodwin L, Copeland A, Lucas S, Han C, Pitluck S, Land ML, Kyrpides NC, Woyke T.

Stand Genomic Sci. 2014 Jan 1;9(3):562-73. doi: 10.4056/sigs.3899418. eCollection 2014 Jun 15.

7.

Complete genome sequence of Mesorhizobium ciceri bv. biserrulae type strain (WSM1271(T)).

Nandasena K, Yates R, Tiwari R, O'Hara G, Howieson J, Ninawi M, Chertkov O, Detter C, Tapia R, Han S, Woyke T, Pitluck S, Nolan M, Land M, Liolios K, Pati A, Copeland A, Kyrpides N, Ivanova N, Goodwin L, Meenakshi U, Reeve W.

Stand Genomic Sci. 2013 Dec 31;9(3):462-72. doi: 10.4056/sigs.4458283. eCollection 2014 Jun 15.

8.

Genome sequence of the Lebeckia ambigua-nodulating "Burkholderia sprentiae" strain WSM5005(T.).

Reeve W, De Meyer S, Terpolilli J, Melino V, Ardley J, Rui T, Tiwari R, Howieson J, Yates R, O'Hara G, Lu M, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Szeto E, Ivanova N, Mikhailova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Peters L, Pitluck S, Woyke T, Kyrpides N.

Stand Genomic Sci. 2013 Dec 15;9(2):385-94. doi: 10.4056/sigs.4558268. eCollection 2013 Dec 20.

9.

Complete genome sequence of Enterobacter sp. IIT-BT 08: A potential microbial strain for high rate hydrogen production.

Khanna N, Ghosh AK, Huntemann M, Deshpande S, Han J, Chen A, Kyrpides N, Mavrommatis K, Szeto E, Markowitz V, Ivanova N, Pagani I, Pati A, Pitluck S, Nolan M, Woyke T, Teshima H, Chertkov O, Daligault H, Davenport K, Gu W, Munk C, Zhang X, Bruce D, Detter C, Xu Y, Quintana B, Reitenga K, Kunde Y, Green L, Erkkila T, Han C, Brambilla EM, Lang E, Klenk HP, Goodwin L, Chain P, Das D.

Stand Genomic Sci. 2013 Dec 15;9(2):359-69. doi: 10.4056/sigs.4348035. eCollection 2013 Dec 20.

10.

Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58.

Galardini M, Bazzicalupo M, Biondi E, Brambilla E, Brilli M, Bruce D, Chain P, Chen A, Daligault H, Davenport KW, Deshpande S, Detter JC, Goodwin LA, Han C, Han J, Huntemann M, Ivanova N, Klenk HP, Kyrpides NC, Markowitz V, Mavrommatis K, Mocali S, Nolan M, Pagani I, Pati A, Pini F, Pitluck S, Spini G, Szeto E, Teshima H, Woyke T, Mengoni A.

Stand Genomic Sci. 2013 Dec 15;9(2):325-33. doi: 10.4056/sigs.3797438. eCollection 2013 Dec 20.

11.

Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075(T.).

Reeve W, Nandasena K, Yates R, Tiwari R, O'Hara G, Ninawi M, Chertkov O, Goodwin L, Bruce D, Detter C, Tapia R, Han S, Woyke T, Pitluck S, Nolan M, Land M, Copeland A, Liolios K, Pati A, Mavromatis K, Markowitz V, Kyrpides N, Ivanova N, Goodwin L, Meenakshi U, Howieson J.

Stand Genomic Sci. 2013 Dec 15;9(2):294-303. doi: 10.4056/sigs.4538264. eCollection 2013 Dec 20.

12.

Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1.

Reeve W, Tian R, De Meyer S, Melino V, Terpolilli J, Ardley J, Tiwari R, Howieson J, Yates R, O'Hara G, Ninawi M, Teshima H, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Ivanova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Pitluck S, Woyke T, Kyrpides N.

Stand Genomic Sci. 2013 Dec 15;9(2):243-53. doi: 10.4056/sigs.4488254. eCollection 2013 Dec 20.

13.

Genome sequence of Frateuria aurantia type strain (Kondô 67(T)), a xanthomonade isolated from Lilium auratium Lindl.

Anderson I, Teshima H, Nolan M, Lapidus A, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin LA, Pitluck S, Liolios K, Mavromatis K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Rohde M, Lang E, Detter JC, Göker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2013 Oct 2;9(1):83-92. doi: 10.4056/sigs.4338002. eCollection 2013 Oct 16.

14.

Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio.

Palaniappan K, Meier-Kolthoff JP, Teshima H, Nolan M, Lapidus A, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin LA, Pitluck S, Liolios K, Mavromatis K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Rohde M, Mayilraj S, Spring S, Detter JC, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Woyke T.

Stand Genomic Sci. 2013 Oct 2;9(1):57-70. doi: 10.4056/sigs.4237901. eCollection 2013 Oct 16.

15.

Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)).

Meier-Kolthoff JP, Lu M, Huntemann M, Lucas S, Lapidus A, Copeland A, Pitluck S, Goodwin LA, Han C, Tapia R, Pötter G, Land M, Ivanova N, Rohde M, Göker M, Detter JC, Woyke T, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2013 Sep 30;9(1):28-41. doi: 10.4056/sigs.4207886. eCollection 2013 Oct 16.

16.

Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4.

Neupane S, Goodwin LA, Högberg N, Kyrpides NC, Alström S, Bruce D, Quintana B, Munk C, Daligault H, Teshima H, Davenport K, Reitenga K, Green L, Chain P, Erkkila T, Gu W, Zhang X, Xu Y, Kunde Y, Chertkov O, Han J, Han C, Detter JC, Ivanova N, Pati A, Chen A, Szeto E, Mavromatis K, Huntemann M, Nolan M, Pitluck S, Deshpande S, Markowitz V, Pagani I, Klenk HP, Woyke T, Finlay RD.

Stand Genomic Sci. 2013 Jul 30;8(3):441-9. doi: 10.4056/sigs.4027757. eCollection 2013 Jul 30.

17.

Complete genome sequence of Dehalobacter restrictus PER-K23(T.).

Kruse T, Maillard J, Goodwin L, Woyke T, Teshima H, Bruce D, Detter C, Tapia R, Han C, Huntemann M, Wei CL, Han J, Chen A, Kyrpides N, Szeto E, Markowitz V, Ivanova N, Pagani I, Pati A, Pitluck S, Nolan M, Holliger C, Smidt H.

Stand Genomic Sci. 2013 Jul 30;8(3):375-88. doi: 10.4056/sigs.3787426. eCollection 2013 Jul 30.

18.

Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae.

Scheuner C, Tindall BJ, Lu M, Nolan M, Lapidus A, Cheng JF, Goodwin L, Pitluck S, Huntemann M, Liolios K, Pagani I, Mavromatis K, Ivanova N, Pati A, Chen A, Palaniappan K, Jeffries CD, Hauser L, Land M, Mwirichia R, Rohde M, Abt B, Detter JC, Woyke T, Eisen JA, Markowitz V, Hugenholtz P, Göker M, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2014 Dec 8;9:10. doi: 10.1186/1944-3277-9-10. eCollection 2014.

19.

Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules.

Hirsch AM, Alvarado J, Bruce D, Chertkov O, De Hoff PL, Detter JC, Fujishige NA, Goodwin LA, Han J, Han S, Ivanova N, Land ML, Lum MR, Milani-Nejad N, Nolan M, Pati A, Pitluck S, Tran SS, Woyke T, Valdés M.

Genome Announc. 2013 Sep 26;1(5). pii: e00759-13. doi: 10.1128/genomeA.00759-13.

20.

Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations.

Bollmann A, Sedlacek CJ, Norton J, Laanbroek HJ, Suwa Y, Stein LY, Klotz MG, Arp D, Sayavedra-Soto L, Lu M, Bruce D, Detter C, Tapia R, Han J, Woyke T, Lucas SM, Pitluck S, Pennacchio L, Nolan M, Land ML, Huntemann M, Deshpande S, Han C, Chen A, Kyrpides N, Mavromatis K, Markowitz V, Szeto E, Ivanova N, Mikhailova N, Pagani I, Pati A, Peters L, Ovchinnikova G, Goodwin LA.

Stand Genomic Sci. 2013 Feb 25;7(3):469-82. doi: 10.4056/sigs.3517166. eCollection 2013.

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