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Results: 6

1.

Modeling alternative splicing variants from RNA-Seq data with isoform graphs.

Beretta S, Bonizzoni P, Vedova GD, Pirola Y, Rizzi R.

J Comput Biol. 2014 Jan;21(1):16-40. doi: 10.1089/cmb.2013.0112. Epub 2013 Nov 7.

PMID:
24200390
[PubMed - indexed for MEDLINE]
2.

A fast and practical approach to genotype phasing and imputation on a pedigree with erroneous and incomplete information.

Pirola Y, Della Vedova G, Biffani S, Stella A, Bonizzoni P.

IEEE/ACM Trans Comput Biol Bioinform. 2012 Nov-Dec;9(6):1582-94.

PMID:
22848137
[PubMed - indexed for MEDLINE]
3.

PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text.

Pirola Y, Rizzi R, Picardi E, Pesole G, Della Vedova G, Bonizzoni P.

BMC Bioinformatics. 2012 Apr 12;13 Suppl 5:S2. doi: 10.1186/1471-2105-13-S5-S2.

PMID:
22537006
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

An efficient algorithm for haplotype inference on pedigrees with recombinations and mutations.

Pirola Y, Bonizzoni P, Jiang T.

IEEE/ACM Trans Comput Biol Bioinform. 2012 Jan-Feb;9(1):12-25. doi: 10.1109/TCBB.2011.51. Epub 2011 Mar 3.

PMID:
21383417
[PubMed - indexed for MEDLINE]
5.

Pure parsimony xor haplotyping.

Bonizzoni P, Della Vedova G, Dondi R, Pirola Y, Rizzi R.

IEEE/ACM Trans Comput Biol Bioinform. 2010 Oct-Dec;7(4):598-610. doi: 10.1109/TCBB.2010.52.

PMID:
20498511
[PubMed - indexed for MEDLINE]
6.

Detecting alternative gene structures from spliced ESTs: a computational approach.

Bonizzoni P, Mauri G, Pesole G, Picardi E, Pirola Y, Rizzi R.

J Comput Biol. 2009 Jan;16(1):43-66. doi: 10.1089/cmb.2008.0028.

PMID:
19119993
[PubMed - indexed for MEDLINE]

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