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Results: 1 to 20 of 27

1.

Natural selection for the Duffy-null allele in the recently admixed people of Madagascar.

Hodgson JA, Pickrell JK, Pearson LN, Quillen EE, Prista A, Rocha J, Soodyall H, Shriver MD, Perry GH.

Proc Biol Sci. 2014 Aug 22;281(1789). pii: 20140930. doi: 10.1098/rspb.2014.0930.

PMID:
24990677
[PubMed - in process]
Free Article
2.

Joint analysis of functional genomic data and genome-wide association studies of 18 human traits.

Pickrell JK.

Am J Hum Genet. 2014 Apr 3;94(4):559-73. doi: 10.1016/j.ajhg.2014.03.004.

PMID:
24702953
[PubMed - indexed for MEDLINE]
3.

Ancient west Eurasian ancestry in southern and eastern Africa.

Pickrell JK, Patterson N, Loh PR, Lipson M, Berger B, Stoneking M, Pakendorf B, Reich D.

Proc Natl Acad Sci U S A. 2014 Feb 18;111(7):2632-7. doi: 10.1073/pnas.1313787111. Epub 2014 Feb 3.

PMID:
24550290
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Ancient DNA reveals key stages in the formation of central European mitochondrial genetic diversity.

Brandt G, Haak W, Adler CJ, Roth C, Szécsényi-Nagy A, Karimnia S, Möller-Rieker S, Meller H, Ganslmeier R, Friederich S, Dresely V, Nicklisch N, Pickrell JK, Sirocko F, Reich D, Cooper A, Alt KW; Genographic Consortium.

Science. 2013 Oct 11;342(6155):257-61. doi: 10.1126/science.1241844.

PMID:
24115443
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Inferring admixture histories of human populations using linkage disequilibrium.

Loh PR, Lipson M, Patterson N, Moorjani P, Pickrell JK, Reich D, Berger B.

Genetics. 2013 Apr;193(4):1233-54. doi: 10.1534/genetics.112.147330. Epub 2013 Feb 14.

PMID:
23410830
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Inference of population splits and mixtures from genome-wide allele frequency data.

Pickrell JK, Pritchard JK.

PLoS Genet. 2012;8(11):e1002967. doi: 10.1371/journal.pgen.1002967. Epub 2012 Nov 15.

PMID:
23166502
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The genetic prehistory of southern Africa.

Pickrell JK, Patterson N, Barbieri C, Berthold F, Gerlach L, Güldemann T, Kure B, Mpoloka SW, Nakagawa H, Naumann C, Lipson M, Loh PR, Lachance J, Mountain J, Bustamante CD, Berger B, Tishkoff SA, Henn BM, Stoneking M, Reich D, Pakendorf B.

Nat Commun. 2012;3:1143. doi: 10.1038/ncomms2140.

PMID:
23072811
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The contribution of RNA decay quantitative trait loci to inter-individual variation in steady-state gene expression levels.

Pai AA, Cain CE, Mizrahi-Man O, De Leon S, Lewellen N, Veyrieras JB, Degner JF, Gaffney DJ, Pickrell JK, Stephens M, Pritchard JK, Gilad Y.

PLoS Genet. 2012;8(10):e1003000. doi: 10.1371/journal.pgen.1003000. Epub 2012 Oct 11.

PMID:
23071454
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Misuse of hierarchical linear models overstates the significance of a reported association between OXTR and prosociality.

Jostins L, Pickrell JK, MacArthur DG, Barrett JC.

Proc Natl Acad Sci U S A. 2012 May 1;109(18):E1048. doi: 10.1073/pnas.1202539109. Epub 2012 Apr 12. No abstract available.

PMID:
22499788
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".

Pickrell JK, Gilad Y, Pritchard JK.

Science. 2012 Mar 16;335(6074):1302; author reply 1302. doi: 10.1126/science.1210484.

PMID:
22422963
[PubMed - indexed for MEDLINE]
Free Article
11.

Exon-specific QTLs skew the inferred distribution of expression QTLs detected using gene expression array data.

Veyrieras JB, Gaffney DJ, Pickrell JK, Gilad Y, Stephens M, Pritchard JK.

PLoS One. 2012;7(2):e30629. doi: 10.1371/journal.pone.0030629. Epub 2012 Feb 16.

PMID:
22359548
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A systematic survey of loss-of-function variants in human protein-coding genes.

MacArthur DG, Balasubramanian S, Frankish A, Huang N, Morris J, Walter K, Jostins L, Habegger L, Pickrell JK, Montgomery SB, Albers CA, Zhang ZD, Conrad DF, Lunter G, Zheng H, Ayub Q, DePristo MA, Banks E, Hu M, Handsaker RE, Rosenfeld JA, Fromer M, Jin M, Mu XJ, Khurana E, Ye K, Kay M, Saunders GI, Suner MM, Hunt T, Barnes IH, Amid C, Carvalho-Silva DR, Bignell AH, Snow C, Yngvadottir B, Bumpstead S, Cooper DN, Xue Y, Romero IG; 1000 Genomes Project Consortium, Wang J, Li Y, Gibbs RA, McCarroll SA, Dermitzakis ET, Pritchard JK, Barrett JC, Harrow J, Hurles ME, Gerstein MB, Tyler-Smith C.

Science. 2012 Feb 17;335(6070):823-8. doi: 10.1126/science.1215040. Erratum in: Science. 2012 Apr 20;336(6079):296.

PMID:
22344438
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

DNase I sensitivity QTLs are a major determinant of human expression variation.

Degner JF, Pai AA, Pique-Regi R, Veyrieras JB, Gaffney DJ, Pickrell JK, De Leon S, Michelini K, Lewellen N, Crawford GE, Stephens M, Gilad Y, Pritchard JK.

Nature. 2012 Feb 5;482(7385):390-4. doi: 10.1038/nature10808.

PMID:
22307276
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Comparative RNA sequencing reveals substantial genetic variation in endangered primates.

Perry GH, Melsted P, Marioni JC, Wang Y, Bainer R, Pickrell JK, Michelini K, Zehr S, Yoder AD, Stephens M, Pritchard JK, Gilad Y.

Genome Res. 2012 Apr;22(4):602-10. doi: 10.1101/gr.130468.111. Epub 2011 Dec 29.

PMID:
22207615
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

False positive peaks in ChIP-seq and other sequencing-based functional assays caused by unannotated high copy number regions.

Pickrell JK, Gaffney DJ, Gilad Y, Pritchard JK.

Bioinformatics. 2011 Aug 1;27(15):2144-6. doi: 10.1093/bioinformatics/btr354. Epub 2011 Jun 19.

PMID:
21690102
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines.

Bell JT, Pai AA, Pickrell JK, Gaffney DJ, Pique-Regi R, Degner JF, Gilad Y, Pritchard JK.

Genome Biol. 2011;12(1):R10. doi: 10.1186/gb-2011-12-1-r10. Epub 2011 Jan 20. Erratum in: Genome Biol. 2011;12(6):405.

PMID:
21251332
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Noisy splicing drives mRNA isoform diversity in human cells.

Pickrell JK, Pai AA, Gilad Y, Pritchard JK.

PLoS Genet. 2010 Dec 9;6(12):e1001236. doi: 10.1371/journal.pgen.1001236.

PMID:
21151575
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The CFTR Met 470 allele is associated with lower birth rates in fertile men from a population isolate.

Kosova G, Pickrell JK, Kelley JL, McArdle PF, Shuldiner AR, Abney M, Ober C.

PLoS Genet. 2010 Jun 3;6(6):e1000974. doi: 10.1371/journal.pgen.1000974.

PMID:
20532200
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Understanding mechanisms underlying human gene expression variation with RNA sequencing.

Pickrell JK, Marioni JC, Pai AA, Degner JF, Engelhardt BE, Nkadori E, Veyrieras JB, Stephens M, Gilad Y, Pritchard JK.

Nature. 2010 Apr 1;464(7289):768-72. doi: 10.1038/nature08872. Epub 2010 Mar 10.

PMID:
20220758
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation.

Pritchard JK, Pickrell JK, Coop G.

Curr Biol. 2010 Feb 23;20(4):R208-15. doi: 10.1016/j.cub.2009.11.055.

PMID:
20178769
[PubMed - indexed for MEDLINE]
Free PMC Article

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