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Results: 1 to 20 of 245

1.

Intracellular pH responses in the industrially important fungus Trichoderma reesei.

Valkonen M, Penttilä M, Benčina M.

Fungal Genet Biol. 2014 Jul 18. pii: S1087-1845(14)00119-4. doi: 10.1016/j.fgb.2014.07.004. [Epub ahead of print]

PMID:
25046860
[PubMed - as supplied by publisher]
2.

The diverse role of Pdr12 in resistance to weak organic acids.

Nygård Y, Mojzita D, Toivari M, Penttilä M, Wiebe MG, Ruohonen L.

Yeast. 2014 Jun;31(6):219-32. doi: 10.1002/yea.3011. Epub 2014 May 6.

PMID:
24691985
[PubMed - in process]
3.

Integration of transcription and flux data reveals molecular paths associated with differences in oxygen-dependent phenotypes of Saccharomyces cerevisiae.

Lindfors E, Jouhten P, Oja M, Rintala E, Orešič M, Penttilä M.

BMC Syst Biol. 2014 Feb 14;8:16. doi: 10.1186/1752-0509-8-16.

PMID:
24528924
[PubMed - in process]
Free PMC Article
4.

Comparative genome-scale reconstruction of gapless metabolic networks for present and ancestral species.

Pitkänen E, Jouhten P, Hou J, Syed MF, Blomberg P, Kludas J, Oja M, Holm L, Penttilä M, Rousu J, Arvas M.

PLoS Comput Biol. 2014 Feb 6;10(2):e1003465. doi: 10.1371/journal.pcbi.1003465. eCollection 2014 Feb.

PMID:
24516375
[PubMed - in process]
Free PMC Article
5.

Screening of candidate regulators for cellulase and hemicellulase production in Trichoderma reesei and identification of a factor essential for cellulase production.

Häkkinen M, Valkonen MJ, Westerholm-Parvinen A, Aro N, Arvas M, Vitikainen M, Penttilä M, Saloheimo M, Pakula TM.

Biotechnol Biofuels. 2014 Jan 28;7(1):14. doi: 10.1186/1754-6834-7-14.

PMID:
24472375
[PubMed]
Free PMC Article
6.

Molecular and functional characterization of an invertase secreted by Ashbya gossypii.

Aguiar TQ, Dinis C, Magalhães F, Oliveira C, Wiebe MG, Penttilä M, Domingues L.

Mol Biotechnol. 2014 Jun;56(6):524-34. doi: 10.1007/s12033-013-9726-9.

PMID:
24452331
[PubMed - in process]
7.

Categorisation of sugar acid dehydratases in Aspergillus niger.

Motter FA, Kuivanen J, Keränen H, Hilditch S, Penttilä M, Richard P.

Fungal Genet Biol. 2014 Mar;64:67-72. doi: 10.1016/j.fgb.2013.12.006. Epub 2013 Dec 29.

PMID:
24382357
[PubMed - in process]
8.

The role of CRE1 in nucleosome positioning within the cbh1 promoter and coding regions of Trichoderma reesei.

Ries L, Belshaw NJ, Ilmén M, Penttilä ME, Alapuranen M, Archer DB.

Appl Microbiol Biotechnol. 2014 Jan;98(2):749-62. doi: 10.1007/s00253-013-5354-3. Epub 2013 Nov 17.

PMID:
24241958
[PubMed - in process]
9.

Yeast oligo-mediated genome engineering (YOGE).

DiCarlo JE, Conley AJ, Penttilä M, Jäntti J, Wang HH, Church GM.

ACS Synth Biol. 2013 Dec 20;2(12):741-9. doi: 10.1021/sb400117c. Epub 2013 Nov 18.

PMID:
24160921
[PubMed - in process]
10.

Online capillary electrophoresis for monitoring carboxylic acid production by yeast during bioreactor cultivations.

Turkia H, Holmström S, Paasikallio T, Sirén H, Penttilä M, Pitkänen JP.

Anal Chem. 2013 Oct 15;85(20):9705-12. doi: 10.1021/ac402113x. Epub 2013 Oct 4.

PMID:
24059627
[PubMed - in process]
11.

Characterization of the Ashbya gossypii secreted N-glycome and genomic insights into its N-glycosylation pathway.

Aguiar TQ, Maaheimo H, Heiskanen A, Wiebe MG, Penttilä M, Domingues L.

Carbohydr Res. 2013 Nov 15;381:19-27. doi: 10.1016/j.carres.2013.08.015. Epub 2013 Aug 25.

PMID:
24056010
[PubMed - in process]
12.

Glycolic acid production in the engineered yeasts Saccharomyces cerevisiae and Kluyveromyces lactis.

Koivistoinen OM, Kuivanen J, Barth D, Turkia H, Pitkänen JP, Penttilä M, Richard P.

Microb Cell Fact. 2013 Sep 23;12:82. doi: 10.1186/1475-2859-12-82.

PMID:
24053654
[PubMed - in process]
Free PMC Article
13.

Single-cell measurements of enzyme levels as a predictive tool for cellular fates during organic acid production.

Zdraljevic S, Wagner D, Cheng K, Ruohonen L, Jäntti J, Penttilä M, Resnekov O, Pesce CG.

Appl Environ Microbiol. 2013 Dec;79(24):7569-82. doi: 10.1128/AEM.01749-13. Epub 2013 Sep 13.

PMID:
24038690
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Noninvasive high-throughput single-cell analysis of the intracellular pH of Saccharomyces cerevisiae by ratiometric flow cytometry.

Valkonen M, Mojzita D, Penttilä M, Bencina M.

Appl Environ Microbiol. 2013 Dec;79(23):7179-87. doi: 10.1128/AEM.02515-13. Epub 2013 Sep 13.

PMID:
24038689
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Engineering chimeric thermostable GH7 cellobiohydrolases in Saccharomyces cerevisiae.

Voutilainen SP, Nurmi-Rantala S, Penttilä M, Koivula A.

Appl Microbiol Biotechnol. 2014 Apr;98(7):2991-3001. doi: 10.1007/s00253-013-5177-2. Epub 2013 Aug 23.

PMID:
23974371
[PubMed - in process]
16.

Swollenin aids in the amorphogenesis step during the enzymatic hydrolysis of pretreated biomass.

Gourlay K, Hu J, Arantes V, Andberg M, Saloheimo M, Penttilä M, Saddler J.

Bioresour Technol. 2013 Aug;142:498-503. doi: 10.1016/j.biortech.2013.05.053. Epub 2013 May 23.

PMID:
23759433
[PubMed - indexed for MEDLINE]
Free Article
17.

Production of L-lactic acid by the yeast Candida sonorensis expressing heterologous bacterial and fungal lactate dehydrogenases.

Ilmén M, Koivuranta K, Ruohonen L, Rajgarhia V, Suominen P, Penttilä M.

Microb Cell Fact. 2013 May 25;12(1):53. [Epub ahead of print]

PMID:
23706009
[PubMed - as supplied by publisher]
Free PMC Article
18.

Random and direct mutagenesis to enhance protein secretion in Ashbya gossypii.

Ribeiro O, Magalhães F, Aguiar TQ, Wiebe MG, Penttilä M, Domingues L.

Bioengineered. 2013 Sep-Oct;4(5):322-31. doi: 10.4161/bioe.24653. Epub 2013 Apr 15.

PMID:
23644277
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Low pH D-xylonate production with Pichia kudriavzevii.

Toivari M, Vehkomäki ML, Nygård Y, Penttilä M, Ruohonen L, Wiebe MG.

Bioresour Technol. 2013 Apr;133:555-62. doi: 10.1016/j.biortech.2013.01.157. Epub 2013 Feb 7.

PMID:
23455228
[PubMed - indexed for MEDLINE]
Free Article
20.

Capillary electrophoresis for the monitoring of phenolic compounds in bioprocesses.

Turkia H, Sirén H, Penttilä M, Pitkänen JP.

J Chromatogr A. 2013 Feb 22;1278:175-80. doi: 10.1016/j.chroma.2013.01.004. Epub 2013 Jan 10.

PMID:
23340436
[PubMed - indexed for MEDLINE]

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