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Results: 9

1.

Possible loss of the chloroplast genome in the parasitic flowering plant Rafflesia lagascae (Rafflesiaceae).

Molina J, Hazzouri KM, Nickrent D, Geisler M, Meyer RS, Pentony MM, Flowers JM, Pelser P, Barcelona J, Inovejas SA, Uy I, Yuan W, Wilkins O, Michel CI, Locklear S, Concepcion GP, Purugganan MD.

Mol Biol Evol. 2014 Apr;31(4):793-803. doi: 10.1093/molbev/msu051. Epub 2014 Jan 23.

PMID:
24458431
[PubMed - in process]
Free PMC Article
2.

Different evolutionary histories of two cation/proton exchanger gene families in plants.

Pires IS, Negrão S, Pentony MM, Abreu IA, Oliveira MM, Purugganan MD.

BMC Plant Biol. 2013 Jul 4;13:97. doi: 10.1186/1471-2229-13-97.

PMID:
23822194
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The plant proteome folding project: structure and positive selection in plant protein families.

Pentony MM, Winters P, Penfold-Brown D, Drew K, Narechania A, DeSalle R, Bonneau R, Purugganan MD.

Genome Biol Evol. 2012;4(3):360-71. doi: 10.1093/gbe/evs015. Epub 2012 Feb 16.

PMID:
22345424
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Computational resources for the prediction and analysis of native disorder in proteins.

Pentony MM, Ward J, Jones DT.

Methods Mol Biol. 2010;604:369-93. doi: 10.1007/978-1-60761-444-9_25.

PMID:
20013384
[PubMed - indexed for MEDLINE]
5.

Modularity of intrinsic disorder in the human proteome.

Pentony MM, Jones DT.

Proteins. 2010 Jan;78(1):212-21. doi: 10.1002/prot.22504.

PMID:
19626706
[PubMed - indexed for MEDLINE]
6.

Insights into the regulation of intrinsically disordered proteins in the human proteome by analyzing sequence and gene expression data.

Edwards YJ, Lobley AE, Pentony MM, Jones DT.

Genome Biol. 2009;10(5):R50. doi: 10.1186/gb-2009-10-5-r50. Epub 2009 May 11.

PMID:
19432952
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

ISPIDER Central: an integrated database web-server for proteomics.

Siepen JA, Belhajjame K, Selley JN, Embury SM, Paton NW, Goble CA, Oliver SG, Stevens R, Zamboulis L, Martin N, Poulovassillis A, Jones P, Côté R, Hermjakob H, Pentony MM, Jones DT, Orengo CA, Hubbard SJ.

Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W485-90. doi: 10.1093/nar/gkn196. Epub 2008 Apr 25.

PMID:
18440977
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified.

Keane TM, Creevey CJ, Pentony MM, Naughton TJ, Mclnerney JO.

BMC Evol Biol. 2006 Mar 24;6:29.

PMID:
16563161
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Does a tree-like phylogeny only exist at the tips in the prokaryotes?

Creevey CJ, Fitzpatrick DA, Philip GK, Kinsella RJ, O'Connell MJ, Pentony MM, Travers SA, Wilkinson M, McInerney JO.

Proc Biol Sci. 2004 Dec 22;271(1557):2551-8.

PMID:
15615680
[PubMed - indexed for MEDLINE]
Free PMC Article

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