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Items: 1 to 20 of 31


Improving the Annotation of Arabidopsis lyrata Using RNA-Seq Data.

Rawat V, Abdelsamad A, Pietzenuk B, Seymour DK, Koenig D, Weigel D, Pecinka A, Schneeberger K.

PLoS One. 2015 Sep 18;10(9):e0137391. doi: 10.1371/journal.pone.0137391. eCollection 2015.


Metatranscriptome analysis reveals host-microbiome interactions in traps of carnivorous Genlisea species.

Cao HX, Schmutzer T, Scholz U, Pecinka A, Schubert I, Vu GT.

Front Microbiol. 2015 Jul 14;6:526. doi: 10.3389/fmicb.2015.00526. eCollection 2015.


Repair of DNA Damage Induced by the Cytidine Analog Zebularine Requires ATR and ATM in Arabidopsis.

Liu CH, Finke A, Díaz M, Rozhon W, Poppenberger B, Baubec T, Pecinka A.

Plant Cell. 2015 Jun;27(6):1788-800. doi: 10.1105/tpc.114.135467. Epub 2015 May 28.


Arabidopsis thaliana natural variation reveals connections between UV radiation stress and plant pathogen-like defense responses.

Piofczyk T, Jeena G, Pecinka A.

Plant Physiol Biochem. 2015 Aug;93:34-43. doi: 10.1016/j.plaphy.2015.01.011. Epub 2015 Feb 2.


Pollen-specific activation of Arabidopsis retrogenes is associated with global transcriptional reprogramming.

Abdelsamad A, Pecinka A.

Plant Cell. 2014 Aug;26(8):3299-313. doi: 10.1105/tpc.114.126011. Epub 2014 Aug 12.


Drugs for plant chromosome and chromatin research.

Pecinka A, Liu CH.

Cytogenet Genome Res. 2014;143(1-3):51-9. doi: 10.1159/000360774. Epub 2014 Mar 28. Review.


Meristem-specific expression of epigenetic regulators safeguards transposon silencing in Arabidopsis.

Baubec T, Finke A, Mittelsten Scheid O, Pecinka A.

EMBO Rep. 2014 Apr;15(4):446-52. doi: 10.1002/embr.201337915. Epub 2014 Feb 20.


Hidden genetic nature of epigenetic natural variation in plants.

Pecinka A, Abdelsamad A, Vu GT.

Trends Plant Sci. 2013 Nov;18(11):625-32. doi: 10.1016/j.tplants.2013.07.005. Epub 2013 Aug 14. Review.


Answer to Wang and Luo, "Polyploidization increases meiotic recombination frequency in Arabidopsis: a close look at statistical modelling and data analysis".

Pecinka A, Levy A, Mittelsten Scheid O.

BMC Biol. 2012 Apr 18;10:31. doi: 10.1186/1741-7007-10-31. No abstract available.


Stress-induced chromatin changes: a critical view on their heritability.

Pecinka A, Mittelsten Scheid O.

Plant Cell Physiol. 2012 May;53(5):801-8. doi: 10.1093/pcp/pcs044. Epub 2012 Mar 28. Review.


Signals of speciation within Arabidopsis thaliana in comparison with its relatives.

Alcázar R, Pecinka A, Aarts MG, Fransz PF, Koornneef M.

Curr Opin Plant Biol. 2012 Apr;15(2):205-11. doi: 10.1016/j.pbi.2012.01.002. Epub 2012 Jan 19. Review.


Polyploidization increases meiotic recombination frequency in Arabidopsis.

Pecinka A, Fang W, Rehmsmeier M, Levy AA, Mittelsten Scheid O.

BMC Biol. 2011 Apr 21;9:24. doi: 10.1186/1741-7007-9-24. Erratum in: BMC Biol. 2012;10:33.


Epigenetic regulation of repetitive elements is attenuated by prolonged heat stress in Arabidopsis.

Pecinka A, Dinh HQ, Baubec T, Rosa M, Lettner N, Mittelsten Scheid O.

Plant Cell. 2010 Sep;22(9):3118-29. doi: 10.1105/tpc.110.078493. Epub 2010 Sep 28.


Cooperation of multiple chromatin modifications can generate unanticipated stability of epigenetic States in Arabidopsis.

Baubec T, Dinh HQ, Pecinka A, Rakic B, Rozhon W, Wohlrab B, von Haeseler A, Mittelsten Scheid O.

Plant Cell. 2010 Jan;22(1):34-47. doi: 10.1105/tpc.109.072819. Epub 2010 Jan 22.


Transgenerational stress memory is not a general response in Arabidopsis.

Pecinka A, Rosa M, Schikora A, Berlinger M, Hirt H, Luschnig C, Mittelsten Scheid O.

PLoS One. 2009;4(4):e5202. doi: 10.1371/journal.pone.0005202. Epub 2009 Apr 21.


Effective, homogeneous and transient interference with cytosine methylation in plant genomic DNA by zebularine.

Baubec T, Pecinka A, Rozhon W, Mittelsten Scheid O.

Plant J. 2009 Feb;57(3):542-54. doi: 10.1111/j.1365-313X.2008.03699.x. Epub 2008 Oct 30.


Size and number of tandem repeat arrays can determine somatic homologous pairing of transgene loci mediated by epigenetic modifications in Arabidopsis thaliana nuclei.

Jovtchev G, Watanabe K, Pecinka A, Rosin FM, Mette MF, Lam E, Schubert I.

Chromosoma. 2008 Jun;117(3):267-76. doi: 10.1007/s00412-007-0146-0. Epub 2008 Jan 17.


Local DNA features affect RNA-directed transcriptional gene silencing and DNA methylation.

Fischer U, Kuhlmann M, Pecinka A, Schmidt R, Mette MF.

Plant J. 2008 Jan;53(1):1-10. Epub 2007 Oct 27.


The triploid endosperm genome of Arabidopsis adopts a peculiar, parental-dosage-dependent chromatin organization.

Baroux C, Pecinka A, Fuchs J, Schubert I, Grossniklaus U.

Plant Cell. 2007 Jun;19(6):1782-94. Epub 2007 Jun 8.

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