Items per page
Sort by

Send to:

Choose Destination

Search results

Items: 20


Genetic adaptation to climate in white spruce involves small to moderate allele frequency shifts in functionally diverse genes.

Hornoy B, Pavy N, Gérardi S, Beaulieu J, Bousquet J.

Genome Biol Evol. 2015 Nov 11. pii: evv218. [Epub ahead of print]


Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce (Picea mariana).

Pavy N, Gagnon F, Deschênes A, Boyle B, Beaulieu J, Bousquet J.

Mol Ecol Resour. 2015 Sep 22. doi: 10.1111/1755-0998.12468. [Epub ahead of print]


The landscape of nucleotide polymorphism among 13,500 genes of the conifer picea glauca, relationships with functions, and comparison with medicago truncatula.

Pavy N, Deschênes A, Blais S, Lavigne P, Beaulieu J, Isabel N, Mackay J, Bousquet J.

Genome Biol Evol. 2013;5(10):1910-25. doi: 10.1093/gbe/evt143.


Analysis of Fabry-Perot optical micro-cavities based on coating-free all-silicon cylindrical Bragg reflectors.

Malak M, Gaber N, Marty F, Pavy N, Richalot E, Bourouina T.

Opt Express. 2013 Jan 28;21(2):2378-92. doi: 10.1364/OE.21.002378.


Development of high-density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners.

Pavy N, Gagnon F, Rigault P, Blais S, Deschênes A, Boyle B, Pelgas B, Deslauriers M, Clément S, Lavigne P, Lamothe M, Cooke JE, Jaramillo-Correa JP, Beaulieu J, Isabel N, Mackay J, Bousquet J.

Mol Ecol Resour. 2013 Mar;13(2):324-36. doi: 10.1111/1755-0998.12062. Epub 2013 Jan 25.


A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers.

Pavy N, Pelgas B, Laroche J, Rigault P, Isabel N, Bousquet J.

BMC Biol. 2012 Oct 26;10:84. doi: 10.1186/1741-7007-10-84.


Towards decoding the conifer giga-genome.

Mackay J, Dean JF, Plomion C, Peterson DG, Cánovas FM, Pavy N, Ingvarsson PK, Savolainen O, Guevara MÁ, Fluch S, Vinceti B, Abarca D, Díaz-Sala C, Cervera MT.

Plant Mol Biol. 2012 Dec;80(6):555-69. doi: 10.1007/s11103-012-9961-7. Epub 2012 Sep 9. Review.


The heterogeneous levels of linkage disequilibrium in white spruce genes and comparative analysis with other conifers.

Pavy N, Namroud MC, Gagnon F, Isabel N, Bousquet J.

Heredity (Edinb). 2012 Mar;108(3):273-84. doi: 10.1038/hdy.2011.72. Epub 2011 Sep 7.


EgMYB1, an R2R3 MYB transcription factor from eucalyptus negatively regulates secondary cell wall formation in Arabidopsis and poplar.

Legay S, Sivadon P, Blervacq AS, Pavy N, Baghdady A, Tremblay L, Levasseur C, Ladouce N, Lapierre C, Séguin A, Hawkins S, Mackay J, Grima-Pettenati J.

New Phytol. 2010 Nov;188(3):774-86. doi: 10.1111/j.1469-8137.2010.03432.x.


High nitrogen fertilization and stem leaning have overlapping effects on wood formation in poplar but invoke largely distinct molecular pathways.

Pitre FE, Lafarguette F, Boyle B, Pavy N, Caron S, Dallaire N, Poulin PL, Ouellet M, Morency MJ, Wiebe N, Ly Lim E, Urbain A, Mouille G, Cooke JE, Mackay JJ.

Tree Physiol. 2010 Oct;30(10):1273-89. doi: 10.1093/treephys/tpq073. Epub 2010 Aug 25.


Identification of conserved core xylem gene sets: conifer cDNA microarray development, transcript profiling and computational analyses.

Pavy N, Boyle B, Nelson C, Paule C, Giguère I, Caron S, Parsons LS, Dallaire N, Bedon F, Bérubé H, Cooke J, Mackay J.

New Phytol. 2008;180(4):766-86. doi: 10.1111/j.1469-8137.2008.02615.x.


Involvement of Pinus taeda MYB1 and MYB8 in phenylpropanoid metabolism and secondary cell wall biogenesis: a comparative in planta analysis.

Bomal C, Bedon F, Caron S, Mansfield SD, Levasseur C, Cooke JE, Blais S, Tremblay L, Morency MJ, Pavy N, Grima-Pettenati J, Séguin A, Mackay J.

J Exp Bot. 2008;59(14):3925-39. doi: 10.1093/jxb/ern234. Epub 2008 Sep 19.


Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: application to the large and unsequenced genomes of white spruce and black spruce.

Pavy N, Pelgas B, Beauseigle S, Blais S, Gagnon F, Gosselin I, Lamothe M, Isabel N, Bousquet J.

BMC Genomics. 2008 Jan 18;9:21. doi: 10.1186/1471-2164-9-21.


ForestTreeDB: a database dedicated to the mining of tree transcriptomes.

Pavy N, Johnson JJ, Crow JA, Paule C, Kunau T, MacKay J, Retzel EF.

Nucleic Acids Res. 2007 Jan;35(Database issue):D888-94. Epub 2006 Nov 27.


Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters.

Pavy N, Paule C, Parsons L, Crow JA, Morency MJ, Cooke J, Johnson JE, Noumen E, Guillet-Claude C, Butterfield Y, Barber S, Yang G, Liu J, Stott J, Kirkpatrick R, Siddiqui A, Holt R, Marra M, Seguin A, Retzel E, Bousquet J, MacKay J.

BMC Genomics. 2005 Oct 19;6:144.


Large-scale statistical analysis of secondary xylem ESTs in pine.

Pavy N, Laroche J, Bousquet J, Mackay J.

Plant Mol Biol. 2005 Jan;57(2):203-24.


Gene prediction and gene classes in Arabidopsis thaliana.

Mathé C, Déhais P, Pavy N, Rombauts S, Van Montagu M, Rouzé P.

J Biotechnol. 2000 Mar 31;78(3):293-9.


Evaluation of gene prediction software using a genomic data set: application to Arabidopsis thaliana sequences.

Pavy N, Rombauts S, Déhais P, Mathé C, Ramana DV, Leroy P, Rouzé P.

Bioinformatics. 1999 Nov;15(11):887-99.


Genome annotation: which tools do we have for it?

Rouzé P, Pavy N, Rombauts S.

Curr Opin Plant Biol. 1999 Apr;2(2):90-5. Review.

Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk