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Results: 1 to 20 of 209

1.

Reply to Alexander S. Parker, Brad C. Leibovich, Jeanette E. Eckel-Passow, John C. Cheville's Letter to the Editor re: Samira A. Brooks, A. Rose Brannon, Joel S. Parker, et al. ClearCode34: A Prognostic Risk Predictor for Localized Clear Cell Renal Cell Carcinoma. Eur Urol 2014;66:77-84.

Rathmell WK, Brooks SA, Parker JS, Nielsen ME.

Eur Urol. 2014 Jul 15. pii: S0302-2838(14)00630-7. doi: 10.1016/j.eururo.2014.07.002. [Epub ahead of print] No abstract available.

PMID:
25037640
[PubMed - as supplied by publisher]
2.

Postmortem ultrastructural analysis of a cornea transplanted with descemet membrane endothelial keratoplasty.

Livny E, Parker JS, van der Kaaij M, Haasdijk ED, van der Wees J, Bruinsma M, Melles GR.

Cornea. 2014 Aug;33(8):790-4. doi: 10.1097/ICO.0000000000000156.

PMID:
24977986
[PubMed - in process]
3.

Integrated RNA and DNA sequencing improves mutation detection in low purity tumors.

Wilkerson MD, Cabanski CR, Sun W, Hoadley KA, Walter V, Mose LE, Troester MA, Hammerman PS, Parker JS, Perou CM, Hayes DN.

Nucleic Acids Res. 2014 Jun 26. pii: gku489. [Epub ahead of print]

PMID:
24970867
[PubMed - as supplied by publisher]
Free Article
4.

Prognostic B-cell Signatures Using mRNA-Seq in Patients with Subtype-Specific Breast and Ovarian Cancer.

Iglesia MD, Vincent BG, Parker JS, Hoadley KA, Carey LA, Perou CM, Serody JS.

Clin Cancer Res. 2014 Jul 15;20(14):3818-29. doi: 10.1158/1078-0432.CCR-13-3368. Epub 2014 Jun 10.

PMID:
24916698
[PubMed - in process]
5.

ABRA: improved coding indel detection via assembly-based realignment.

Mose LE, Wilkerson MD, Hayes DN, Perou CM, Parker JS.

Bioinformatics. 2014 Jun 6. pii: btu376. [Epub ahead of print]

PMID:
24907369
[PubMed - as supplied by publisher]
Free Article
6.

Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling.

Zhao W, He X, Hoadley KA, Parker JS, Hayes DN, Perou CM.

BMC Genomics. 2014 Jun 2;15:419. doi: 10.1186/1471-2164-15-419.

PMID:
24888378
[PubMed - in process]
Free PMC Article
7.

More on personhood for chimps.

Parker JS.

J Am Vet Med Assoc. 2014 Apr 15;244(8):894-5. No abstract available.

PMID:
24818309
[PubMed - in process]
8.

Comprehensive analysis of gene expression in human retina and supporting tissues.

Li M, Jia C, Kazmierkiewicz KL, Bowman AS, Tian L, Liu Y, Gupta NA, Gudiseva HV, Yee SS, Kim M, Dentchev T, Kimble JA, Parker JS, Messinger JD, Hakonarson H, Curcio CA, Stambolian D.

Hum Mol Genet. 2014 Aug 1;23(15):4001-14. doi: 10.1093/hmg/ddu114. Epub 2014 Mar 14.

PMID:
24634144
[PubMed - in process]
Free Article
9.

ClearCode34: A prognostic risk predictor for localized clear cell renal cell carcinoma.

Brooks SA, Brannon AR, Parker JS, Fisher JC, Sen O, Kattan MW, Hakimi AA, Hsieh JJ, Choueiri TK, Tamboli P, Maranchie JK, Hinds P, Miller CR, Nielsen ME, Rathmell WK.

Eur Urol. 2014 Jul;66(1):77-84. doi: 10.1016/j.eururo.2014.02.035. Epub 2014 Feb 25.

PMID:
24613583
[PubMed - in process]
10.

People are people.

Parker JS.

J Am Vet Med Assoc. 2014 Mar 15;244(6):646. doi: 10.2460/javma.244.6.646. No abstract available.

PMID:
24568102
[PubMed - in process]
11.

Intrinsic subtypes of high-grade bladder cancer reflect the hallmarks of breast cancer biology.

Damrauer JS, Hoadley KA, Chism DD, Fan C, Tiganelli CJ, Wobker SE, Yeh JJ, Milowsky MI, Iyer G, Parker JS, Kim WY.

Proc Natl Acad Sci U S A. 2014 Feb 25;111(8):3110-5. doi: 10.1073/pnas.1318376111. Epub 2014 Feb 11.

PMID:
24520177
[PubMed - indexed for MEDLINE]
12.

Equality of opportunity in veterinary medicine.

Parker JS.

J Am Vet Med Assoc. 2013 Dec 15;243(12):1677-8. No abstract available.

PMID:
24443763
[PubMed - in process]
13.

Prenatal arsenic exposure and the epigenome: altered microRNAs associated with innate and adaptive immune signaling in newborn cord blood.

Rager JE, Bailey KA, Smeester L, Miller SK, Parker JS, Laine JE, Drobná Z, Currier J, Douillet C, Olshan AF, Rubio-Andrade M, Stýblo M, García-Vargas G, Fry RC.

Environ Mol Mutagen. 2014 Apr;55(3):196-208. doi: 10.1002/em.21842. Epub 2013 Dec 10.

PMID:
24327377
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Characterization of cell lines derived from breast cancers and normal mammary tissues for the study of the intrinsic molecular subtypes.

Prat A, Karginova O, Parker JS, Fan C, He X, Bixby L, Harrell JC, Roman E, Adamo B, Troester M, Perou CM.

Breast Cancer Res Treat. 2013 Nov;142(2):237-55. doi: 10.1007/s10549-013-2743-3. Epub 2013 Oct 27.

PMID:
24162158
[PubMed - in process]
Free PMC Article
15.

Variation in chromatin accessibility in human kidney cancer links H3K36 methyltransferase loss with widespread RNA processing defects.

Simon JM, Hacker KE, Singh D, Brannon AR, Parker JS, Weiser M, Ho TH, Kuan PF, Jonasch E, Furey TS, Prins JF, Lieb JD, Rathmell WK, Davis IJ.

Genome Res. 2014 Feb;24(2):241-50. doi: 10.1101/gr.158253.113. Epub 2013 Oct 24.

PMID:
24158655
[PubMed - indexed for MEDLINE]
Free Article
16.

Concise copper-catalyzed synthesis of tricyclic biaryl ether-linked aza-heterocyclic ring systems.

Mestichelli P, Scott MJ, Galloway WR, Selwyn J, Parker JS, Spring DR.

Org Lett. 2013 Nov 1;15(21):5448-51. doi: 10.1021/ol4025259. Epub 2013 Oct 17.

PMID:
24134806
[PubMed - indexed for MEDLINE]
17.

Veterinary applicants.

Parker JS.

J Am Vet Med Assoc. 2013 Sep 1;243(5):617-8. No abstract available.

PMID:
24133706
[PubMed - indexed for MEDLINE]
18.

Dysregulation of the epigenome in triple-negative breast cancers: basal-like and claudin-low breast cancers express aberrant DNA hypermethylation.

Roll JD, Rivenbark AG, Sandhu R, Parker JS, Jones WD, Carey LA, Livasy CA, Coleman WB.

Exp Mol Pathol. 2013 Dec;95(3):276-87. doi: 10.1016/j.yexmp.2013.09.001. Epub 2013 Sep 14.

PMID:
24045095
[PubMed - indexed for MEDLINE]
19.

Androgen receptor signaling regulates DNA repair in prostate cancers.

Polkinghorn WR, Parker JS, Lee MX, Kass EM, Spratt DE, Iaquinta PJ, Arora VK, Yen WF, Cai L, Zheng D, Carver BS, Chen Y, Watson PA, Shah NP, Fujisawa S, Goglia AG, Gopalan A, Hieronymus H, Wongvipat J, Scardino PT, Zelefsky MJ, Jasin M, Chaudhuri J, Powell SN, Sawyers CL.

Cancer Discov. 2013 Nov;3(11):1245-53. doi: 10.1158/2159-8290.CD-13-0172. Epub 2013 Sep 11.

PMID:
24027196
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Topoisomerases facilitate transcription of long genes linked to autism.

King IF, Yandava CN, Mabb AM, Hsiao JS, Huang HS, Pearson BL, Calabrese JM, Starmer J, Parker JS, Magnuson T, Chamberlain SJ, Philpot BD, Zylka MJ.

Nature. 2013 Sep 5;501(7465):58-62. doi: 10.1038/nature12504. Epub 2013 Aug 28.

PMID:
23995680
[PubMed - indexed for MEDLINE]
Free PMC Article

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