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Items: 1 to 20 of 137

1.

Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi.

Zeiner CA, Purvine SO, Zink EM, Paša-Tolić L, Chaput DL, Haridas S, Wu S, LaButti K, Grigoriev IV, Henrissat B, Santelli CM, Hansel CM.

PLoS One. 2016 Jul 19;11(7):e0157844. doi: 10.1371/journal.pone.0157844. eCollection 2016.

2.

Characterization of Proteoforms with Unknown Post-translational Modifications Using the MIScore.

Kou Q, Zhu B, Wu S, Ansong C, Tolić N, Paša-Tolić L, Liu X.

J Proteome Res. 2016 Jul 1. [Epub ahead of print]

PMID:
27291504
3.

Soybean Roots Grown under Heat Stress Show Global Changes in Their Transcriptional and Proteomic Profiles.

Valdés-López O, Batek J, Gomez-Hernandez N, Nguyen CT, Isidra-Arellano MC, Zhang N, Joshi T, Xu D, Hixson KK, Weitz KK, Aldrich JT, Paša-Tolić L, Stacey G.

Front Plant Sci. 2016 Apr 25;7:517. doi: 10.3389/fpls.2016.00517. eCollection 2016.

4.

Top-down analysis of protein samples by de novo sequencing techniques.

Vyatkina K, Wu S, Dekker LJ, VanDuijn MM, Liu X, Tolić N, Luider TM, Paša-Tolić L, Pevzner PA.

Bioinformatics. 2016 May 14. pii: btw307. [Epub ahead of print]

PMID:
27187201
5.

Vacuum Ultraviolet Photodissociation and Fourier Transform-Ion Cyclotron Resonance (FT-ICR) Mass Spectrometry: Revisited.

Shaw JB, Robinson EW, Paša-Tolić L.

Anal Chem. 2016 Mar 15;88(6):3019-23. doi: 10.1021/acs.analchem.6b00148. Epub 2016 Feb 26.

PMID:
26882021
6.

Utilizing a Robotic Sprayer for High Lateral and Mass Resolution MALDI FT-ICR MSI of Microbial Cultures.

Anderton CR, Chu RK, Tolić N, Creissen A, Paša-Tolić L.

J Am Soc Mass Spectrom. 2016 Mar;27(3):556-9. doi: 10.1007/s13361-015-1324-6. Epub 2016 Jan 4.

PMID:
26729451
7.

An adaptable multiple power source for mass spectrometry and other scientific instruments.

Lin TY, Anderson GA, Norheim RV, Prost SA, LaMarche BL, Leach FE 3rd, Auberry KJ, Smith RD, Koppenaal DW, Robinson EW, Paša-Tolić L.

Rev Sci Instrum. 2015 Sep;86(9):094102. doi: 10.1063/1.4930967.

PMID:
26429459
8.

De Novo Sequencing of Peptides from Top-Down Tandem Mass Spectra.

Vyatkina K, Wu S, Dekker LJ, VanDuijn MM, Liu X, Tolić N, Dvorkin M, Alexandrova S, Luider TM, Paša-Tolić L, Pevzner PA.

J Proteome Res. 2015 Nov 6;14(11):4450-62. doi: 10.1021/pr501244v. Epub 2015 Oct 13.

PMID:
26412692
9.

MALDI-Mass Spectrometric Imaging Revealing Hypoxia-Driven Lipids and Proteins in a Breast Tumor Model.

Jiang L, Chughtai K, Purvine SO, Bhujwalla ZM, Raman V, Paša-Tolić L, Heeren RM, Glunde K.

Anal Chem. 2015 Jun 16;87(12):5947-56. doi: 10.1021/ac504503x. Epub 2015 Jun 4.

10.

Advanced solvent based methods for molecular characterization of soil organic matter by high-resolution mass spectrometry.

Tfaily MM, Chu RK, Tolić N, Roscioli KM, Anderton CR, Paša-Tolić L, Robinson EW, Hess NJ.

Anal Chem. 2015;87(10):5206-15. doi: 10.1021/acs.analchem.5b00116. Epub 2015 Apr 30.

PMID:
25884232
11.

Subunit compositions of Arabidopsis RNA polymerases I and III reveal Pol I- and Pol III-specific forms of the AC40 subunit and alternative forms of the C53 subunit.

Ream TS, Haag JR, Pontvianne F, Nicora CD, Norbeck AD, Paša-Tolić L, Pikaard CS.

Nucleic Acids Res. 2015 Apr 30;43(8):4163-78. doi: 10.1093/nar/gkv247. Epub 2015 Mar 26.

12.

Functional diversification of maize RNA polymerase IV and V subtypes via alternative catalytic subunits.

Haag JR, Brower-Toland B, Krieger EK, Sidorenko L, Nicora CD, Norbeck AD, Irsigler A, LaRue H, Brzeski J, McGinnis K, Ivashuta S, Pasa-Tolic L, Chandler VL, Pikaard CS.

Cell Rep. 2014 Oct 9;9(1):378-90. doi: 10.1016/j.celrep.2014.08.067. Epub 2014 Oct 2.

13.

A method to determine lysine acetylation stoichiometries.

Nakayasu ES, Wu S, Sydor MA, Shukla AK, Weitz KK, Moore RJ, Hixson KK, Kim JS, Petyuk VA, Monroe ME, Pasa-Tolic L, Qian WJ, Smith RD, Adkins JN, Ansong C.

Int J Proteomics. 2014;2014:730725. doi: 10.1155/2014/730725. Epub 2014 Jul 20.

14.

Structural analysis of N- and O-glycans using ZIC-HILIC/dialysis coupled to NMR detection.

Qu Y, Feng J, Deng S, Cao L, Zhang Q, Zhao R, Zhang Z, Jiang Y, Zink EM, Baker SE, Lipton MS, Paša-Tolić L, Hu JZ, Wu S.

Fungal Genet Biol. 2014 Nov;72:207-15. doi: 10.1016/j.fgb.2014.08.001. Epub 2014 Aug 10.

PMID:
25117693
15.

Application of printed circuit board technology to FT-ICR MS analyzer cell construction and prototyping.

Leach FE 3rd, Norheim R, Anderson G, Pasa-Tolic L.

J Am Soc Mass Spectrom. 2014 Dec;25(12):2069-72. doi: 10.1007/s13361-014-0952-6. Epub 2014 Jul 24.

PMID:
25056862
16.

Metaproteomics reveals differential modes of metabolic coupling among ubiquitous oxygen minimum zone microbes.

Hawley AK, Brewer HM, Norbeck AD, Paša-Tolić L, Hallam SJ.

Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):11395-400. doi: 10.1073/pnas.1322132111. Epub 2014 Jul 22.

17.

High-throughput proteomics.

Zhang Z, Wu S, Stenoien DL, Paša-Tolić L.

Annu Rev Anal Chem (Palo Alto Calif). 2014;7:427-54. doi: 10.1146/annurev-anchem-071213-020216.

PMID:
25014346
18.

Secondary ion mass spectrometry imaging of Dictyostelium discoideum aggregation streams.

DeBord JD, Smith DF, Anderton CR, Heeren RM, Paša-Tolić L, Gomer RH, Fernandez-Lima FA.

PLoS One. 2014 Jun 9;9(6):e99319. doi: 10.1371/journal.pone.0099319. eCollection 2014.

19.

De novo protein sequencing by combining top-down and bottom-up tandem mass spectra.

Liu X, Dekker LJ, Wu S, Vanduijn MM, Luider TM, Tolić N, Kou Q, Dvorkin M, Alexandrova S, Vyatkina K, Paša-Tolić L, Pevzner PA.

J Proteome Res. 2014 Jul 3;13(7):3241-8. doi: 10.1021/pr401300m. Epub 2014 Jun 18.

PMID:
24874765
20.

Automated genome mining of ribosomal peptide natural products.

Mohimani H, Kersten RD, Liu WT, Wang M, Purvine SO, Wu S, Brewer HM, Pasa-Tolic L, Bandeira N, Moore BS, Pevzner PA, Dorrestein PC.

ACS Chem Biol. 2014 Jul 18;9(7):1545-51. doi: 10.1021/cb500199h. Epub 2014 May 23.

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