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Results: 1 to 20 of 393

1.

First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant.

Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Liebl W, Schlüter A.

J Biotechnol. 2014 Sep 28. pii: S0168-1656(14)00865-7. doi: 10.1016/j.jbiotec.2014.09.017. [Epub ahead of print]

PMID:
25270021
[PubMed - as supplied by publisher]
2.

Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MFT.

Maus I, Stantscheff R, Wibberg D, Stolze Y, Winkler A, Pühler A, König H, Schlüter A.

J Biotechnol. 2014 Sep 28. pii: S0168-1656(14)00866-9. doi: 10.1016/j.jbiotec.2014.09.018. [Epub ahead of print]

PMID:
25270020
[PubMed - as supplied by publisher]
3.

Complete genome sequence of Peptoniphilus sp. strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation.

Tomazetto G, Hahnke S, Maus I, Wibberg D, Pühler A, Schlüter A, Klocke M.

J Biotechnol. 2014 Sep 19. pii: S0168-1656(14)00859-1. doi: 10.1016/j.jbiotec.2014.09.011. [Epub ahead of print]

PMID:
25242663
[PubMed - as supplied by publisher]
4.

Successful heterologous expression of a novel chitinase identified by sequence analyses of the metagenome from a chitin-enriched soil sample.

Stöveken J, Singh R, Kolkenbrock S, Zakrzewski M, Wibberg D, Eikmeyer FG, Pühler A, Schlüter A, Moerschbacher BM.

J Biotechnol. 2014 Sep 18. pii: S0168-1656(14)00858-X. doi: 10.1016/j.jbiotec.2014.09.010. [Epub ahead of print]

PMID:
25240439
[PubMed - as supplied by publisher]
5.

Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs).

Wibberg D, Jelonek L, Rupp O, Kröber M, Goesmann A, Grosch R, Pühler A, Schlüter A.

Fungal Biol. 2014 Sep-Oct;118(9-10):800-13. doi: 10.1016/j.funbio.2014.06.007. Epub 2014 Jul 17.

PMID:
25209639
[PubMed - in process]
6.

Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant.

Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A.

J Biotechnol. 2014 Aug 28;188C:136-137. doi: 10.1016/j.jbiotec.2014.08.024. [Epub ahead of print]

PMID:
25173616
[PubMed - as supplied by publisher]
7.

Carbon source dependent biosynthesis of acarviose metabolites in Actinoplanes sp. SE50/110.

Wendler S, Ortseifen V, Persicke M, Klein A, Neshat A, Niehaus K, Schneiker-Bekel S, Walter F, Wehmeier UF, Kalinowski J, Pühler A.

J Biotechnol. 2014 Aug 26. pii: S0168-1656(14)00824-4. doi: 10.1016/j.jbiotec.2014.08.019. [Epub ahead of print]

PMID:
25169663
[PubMed - as supplied by publisher]
8.

Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing.

Jakobi T, Brinkrolf K, Tauch A, Noll T, Stoye J, Pühler A, Goesmann A.

J Biotechnol. 2014 Jul 31. pii: S0168-1656(14)00782-2. doi: 10.1016/j.jbiotec.2014.07.437. [Epub ahead of print]

PMID:
25086342
[PubMed - as supplied by publisher]
9.

Metabolic flux pattern of glucose utilization by Xanthomonas campestris pv. campestris: prevalent role of the Entner-Doudoroff pathway and minor fluxes through the pentose phosphate pathway and glycolysis.

Schatschneider S, Huber C, Neuweger H, Watt TF, Pühler A, Eisenreich W, Wittmann C, Niehaus K, Vorhölter FJ.

Mol Biosyst. 2014 Oct;10(10):2663-76. doi: 10.1039/c4mb00198b.

PMID:
25072918
[PubMed - in process]
10.

Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw.

Hahnke S, Wibberg D, Tomazetto G, Pühler A, Klocke M, Schlüter A.

J Biotechnol. 2014 Aug 20;184:199-200. doi: 10.1016/j.jbiotec.2014.05.026. Epub 2014 Jun 4.

PMID:
24905146
[PubMed - in process]
11.

Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing.

Kröber M, Wibberg D, Grosch R, Eikmeyer F, Verwaaijen B, Chowdhury SP, Hartmann A, Pühler A, Schlüter A.

Front Microbiol. 2014 May 27;5:252. doi: 10.3389/fmicb.2014.00252. eCollection 2014.

PMID:
24904564
[PubMed]
Free PMC Article
12.

IncH-type plasmid harboring bla CTX-M-15, bla DHA-1, and qnrB4 genes recovered from animal isolates.

Schlüter A, Nordmann P, Bonnin RA, Millemann Y, Eikmeyer FG, Wibberg D, Pühler A, Poirel L.

Antimicrob Agents Chemother. 2014 Jul;58(7):3768-73. doi: 10.1128/AAC.02695-14. Epub 2014 Apr 21.

PMID:
24752252
[PubMed - in process]
13.

Rhizobial plasmid pLPU83a is able to switch between different transfer machineries depending on its genomic background.

Torres Tejerizo G, Pistorio M, Althabegoiti MJ, Cervantes L, Wibberg D, Schlüter A, Pühler A, Lagares A, Romero D, Brom S.

FEMS Microbiol Ecol. 2014 Jun;88(3):565-78. doi: 10.1111/1574-6941.12325. Epub 2014 Apr 7.

PMID:
24646299
[PubMed - indexed for MEDLINE]
14.

Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts.

Schwientek P, Neshat A, Kalinowski J, Klein A, Rückert C, Schneiker-Bekel S, Wendler S, Stoye J, Pühler A.

J Biotechnol. 2014 Mar 15. pii: S0168-1656(14)00116-3. doi: 10.1016/j.jbiotec.2014.03.013. [Epub ahead of print]

PMID:
24642337
[PubMed - as supplied by publisher]
15.

Complete genome sequence of the actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin.

Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Fischer N, Steinkämper A, Pühler A, Biener R, Schwartz D, Kalinowski J.

J Biotechnol. 2014 May 20;178:41-2. doi: 10.1016/j.jbiotec.2014.03.011. Epub 2014 Mar 15.

PMID:
24637369
[PubMed - in process]
16.

Genome Sequence of the Acute Urethral Catheter Isolate Pseudomonas aeruginosa MH38.

Wibberg D, Tielen P, Blom J, Rosin N, Schobert M, Tüpker R, Schatschneider S, Spilker D, Albersmeier A, Goesmann A, Vorhölter FJ, Pühler A, Jahn D.

Genome Announc. 2014 Mar 13;2(2). pii: e00161-14. doi: 10.1128/genomeA.00161-14.

PMID:
24625869
[PubMed]
Free PMC Article
17.

Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.).

Becker J, Timmermann C, Rupp O, Albaum SP, Brinkrolf K, Goesmann A, Pühler A, Tauch A, Noll T.

J Biotechnol. 2014 May 20;178:23-31. doi: 10.1016/j.jbiotec.2014.02.021. Epub 2014 Mar 5.

PMID:
24613301
[PubMed - in process]
18.

Genome sequence of the acid-tolerant strain Rhizobium sp. LPU83.

Wibberg D, Tejerizo GT, Del Papa MF, Martini C, Pühler A, Lagares A, Schlüter A, Pistorio M.

J Biotechnol. 2014 Apr 20;176:40-1. doi: 10.1016/j.jbiotec.2014.02.008. Epub 2014 Feb 17.

PMID:
24556327
[PubMed - in process]
19.

Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.

Wibberg D, Luque-Almagro VM, Igeño MI, Bremges A, Roldán MD, Merchán F, Sáez LP, Guijo MI, Manso MI, Macías D, Cabello P, Becerra G, Ibáñez MI, Carmona MI, Escribano MM, Castillo F, Sczyrba A, Moreno-Vivián C, Blasco R, Pühler A, Schlüter A.

J Biotechnol. 2014 Apr 10;175:67-8. doi: 10.1016/j.jbiotec.2014.02.004. Epub 2014 Feb 16.

PMID:
24553071
[PubMed - in process]
20.

Architecture and functions of a multipartite genome of the methylotrophic bacterium Paracoccus aminophilus JCM 7686, containing primary and secondary chromids.

Dziewit L, Czarnecki J, Wibberg D, Radlinska M, Mrozek P, Szymczak M, Schlüter A, Pühler A, Bartosik D.

BMC Genomics. 2014 Feb 12;15:124. doi: 10.1186/1471-2164-15-124.

PMID:
24517536
[PubMed - in process]
Free PMC Article

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