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Results: 1 to 20 of 34

1.

Cancer diagnosis by nuclear morphometry using spatial information .

Huang H, Tosun AB, Guo J, Chen C, Wang W, Ozolek JA, Rohde GK.

Pattern Recognit Lett. 2014 Jun 1;42:115-121.

PMID:
24910485
[PubMed]
2.

Accurate diagnosis of thyroid follicular lesions from nuclear morphology using supervised learning.

Ozolek JA, Tosun AB, Wang W, Chen C, Kolouri S, Basu S, Huang H, Rohde GK.

Med Image Anal. 2014 Jul;18(5):772-80. doi: 10.1016/j.media.2014.04.004. Epub 2014 Apr 21.

PMID:
24835183
[PubMed - in process]
3.

Lactobacillus rhamnosus HN001 decreases the severity of necrotizing enterocolitis in neonatal mice and preterm piglets: evidence in mice for a role of TLR9.

Good M, Sodhi CP, Ozolek JA, Buck RH, Goehring KC, Thomas DL, Vikram A, Bibby K, Morowitz MJ, Firek B, Lu P, Hackam DJ.

Am J Physiol Gastrointest Liver Physiol. 2014 Jun 1;306(11):G1021-32. doi: 10.1152/ajpgi.00452.2013. Epub 2014 Apr 17.

PMID:
24742987
[PubMed - indexed for MEDLINE]
4.

Images as occlusions of textures: a framework for segmentation.

McCann MT, Mixon DG, Fickus MC, Castro CA, Ozolek JA, Kovacevic J.

IEEE Trans Image Process. 2014 May;23(5):2033-46. doi: 10.1109/TIP.2014.2307475.

PMID:
24710403
[PubMed - in process]
5.

Toll-like receptor 4-mediated endoplasmic reticulum stress in intestinal crypts induces necrotizing enterocolitis.

Afrazi A, Branca MF, Sodhi CP, Good M, Yamaguchi Y, Egan CE, Lu P, Jia H, Shaffiey S, Lin J, Ma C, Vincent G, Prindle T Jr, Weyandt S, Neal MD, Ozolek JA, Wiersch J, Tschurtschenthaler M, Shiota C, Gittes GK, Billiar TR, Mollen K, Kaser A, Blumberg R, Hackam DJ.

J Biol Chem. 2014 Apr 4;289(14):9584-99. doi: 10.1074/jbc.M113.526517. Epub 2014 Feb 11.

PMID:
24519940
[PubMed - indexed for MEDLINE]
6.

A linear optimal transportation framework for quantifying and visualizing variations in sets of images.

Wang W, Slepčev D, Basu S, Ozolek JA, Rohde GK.

Int J Comput Vis. 2013 Jan 1;101(2):254-269.

PMID:
23729991
[PubMed]
Free PMC Article
7.

A flexible and robust approach for segmenting cell nuclei from 2D microscopy images using supervised learning and template matching.

Chen C, Wang W, Ozolek JA, Rohde GK.

Cytometry A. 2013 May;83(5):495-507. doi: 10.1002/cyto.a.22280. Epub 2013 Apr 8.

PMID:
23568787
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Pathology of central nervous system posttransplant lymphoproliferative disorders: lessons from pediatric autopsies.

Gheorghe G, Radu O, Milanovich S, Hamilton RL, Jaffe R, Southern JF, Ozolek JA.

Pediatr Dev Pathol. 2013 Mar-Apr;16(2):67-73. doi: 10.2350/12-01-1148-OA.1. Epub 2013 Jan 3.

PMID:
23286282
[PubMed - indexed for MEDLINE]
9.

A domain-knowledge-inspired mathematical framework for the description and classification of H&E stained histopathology images.

Massar ML, Bhagavatula R, Ozolek JA, Castro CA, Fickus M, Kovačević J.

Proc SPIE. 2011 Oct 19;8138:81380U. Epub 2011 Sep 27.

PMID:
22942990
[PubMed]
Free PMC Article
10.

Intestinal epithelial Toll-like receptor 4 regulates goblet cell development and is required for necrotizing enterocolitis in mice.

Sodhi CP, Neal MD, Siggers R, Sho S, Ma C, Branca MF, Prindle T Jr, Russo AM, Afrazi A, Good M, Brower-Sinning R, Firek B, Morowitz MJ, Ozolek JA, Gittes GK, Billiar TR, Hackam DJ.

Gastroenterology. 2012 Sep;143(3):708-18.e1-5. doi: 10.1053/j.gastro.2012.05.053. Epub 2012 Jul 13.

PMID:
22796522
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Human amniotic epithelial cells are reprogrammed more efficiently by induced pluripotency than adult fibroblasts.

Easley CA 4th, Miki T, Castro CA, Ozolek JA, Minervini CF, Ben-Yehudah A, Schatten GP.

Cell Reprogram. 2012 Jun;14(3):193-203. doi: 10.1089/cell.2011.0106.

PMID:
22686477
[PubMed - indexed for MEDLINE]
12.

Penalized Fisher Discriminant Analysis and Its Application to Image-Based Morphometry.

Wang W, Mo Y, Ozolek JA, Rohde GK.

Pattern Recognit Lett. 2011 Nov 1;32(15):2128-2135.

PMID:
22140290
[PubMed]
Free PMC Article
13.

Congenital choristomas of the oral cavity in children.

Chai RL, Ozolek JA, Branstetter BF, Mehta DK, Simons JP.

Laryngoscope. 2011 Oct;121(10):2100-6. doi: 10.1002/lary.21758. Epub 2011 Aug 8.

PMID:
21826675
[PubMed - indexed for MEDLINE]
14.

A general system for automatic biomedical image segmentation using intensity neighborhoods.

Chen C, Ozolek JA, Wang W, Rohde GK.

Int J Biomed Imaging. 2011;2011:606857. doi: 10.1155/2011/606857. Epub 2011 Jun 23.

PMID:
21760767
[PubMed]
Free PMC Article
15.

Valproic acid-associated acute liver failure in children: case report and analysis of liver transplantation outcomes in the United States.

Mindikoglu AL, King D, Magder LS, Ozolek JA, Mazariegos GV, Shneider BL.

J Pediatr. 2011 May;158(5):802-7. doi: 10.1016/j.jpeds.2010.10.033. Epub 2010 Dec 16.

PMID:
21167499
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

An optimal transportation approach for nuclear structure-based pathology.

Wang W, Ozolek JA, Slepčev D, Lee AB, Chen C, Rohde GK.

IEEE Trans Med Imaging. 2011 Mar;30(3):621-31. doi: 10.1109/TMI.2010.2089693. Epub 2010 Oct 25.

PMID:
20977984
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Semiquantitative histopathology and 3D magnetic resonance microscopy as collaborative platforms for tissue identification and comparison within teratomas derived from pedigreed primate embryonic stem cells.

Castro CA, Ben-Yehudah A, Ozolek JA, Mills PH, Redinger CJ, Mich-Basso JD, McFarland DA, Oliver SL, Ahrens ET, Schatten G.

Stem Cell Res. 2010 Nov;5(3):201-11. doi: 10.1016/j.scr.2010.07.005. Epub 2010 Aug 6.

PMID:
20864427
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

AUTOMATIC IDENTIFICATION AND DELINEATION OF GERM LAYER COMPONENTS IN H&E STAINED IMAGES OF TERATOMAS DERIVED FROM HUMAN AND NONHUMAN PRIMATE EMBRYONIC STEM CELLS.

Bhagavatula R, Fickus M, Kelly W, Guo C, Ozolek JA, Castro CA, Kovačević J.

Proc IEEE Int Symp Biomed Imaging. 2010 Apr 14;2010:1041-1044.

PMID:
20694187
[PubMed]
Free PMC Article
19.

Detection and classification of thyroid follicular lesions based on nuclear structure from histopathology images.

Wang W, Ozolek JA, Rohde GK.

Cytometry A. 2010 May;77(5):485-94. doi: 10.1002/cyto.a.20853.

PMID:
20099247
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

In vitro neural differentiation of human embryonic stem cells using a low-density mouse embryonic fibroblast feeder protocol.

Ozolek JA, Jane EP, Esplen JE, Petrosko P, Wehn AK, Erb TM, Mucko SE, Cote LC, Sammak PJ.

Methods Mol Biol. 2010;584:71-95. doi: 10.1007/978-1-60761-369-5_4.

PMID:
19907972
[PubMed - indexed for MEDLINE]

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