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Results: 14

1.

Methylation-specific digital karyotyping of HPV16E6E7-expressing human keratinocytes identifies novel methylation events in cervical carcinogenesis.

Steenbergen RD, Ongenaert M, Snellenberg S, Trooskens G, van der Meide WF, Pandey D, Bloushtain-Qimron N, Polyak K, Meijer CJ, Snijders PJ, Van Criekinge W.

J Pathol. 2013 Sep;231(1):53-62. doi: 10.1002/path.4210. Epub 2013 Jul 8.

PMID:
23674368
[PubMed - indexed for MEDLINE]
2.

Novel TAL1 targets beyond protein-coding genes: identification of TAL1-regulated microRNAs in T-cell acute lymphoblastic leukemia.

Correia NC, Durinck K, Leite AP, Ongenaert M, Rondou P, Speleman F, Enguita FJ, Barata JT.

Leukemia. 2013 Jul;27(7):1603-6. doi: 10.1038/leu.2013.63. Epub 2013 Mar 1. No abstract available.

PMID:
23448994
[PubMed - indexed for MEDLINE]
3.

Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers.

Decock A, Ongenaert M, Hoebeeck J, De Preter K, Van Peer G, Van Criekinge W, Ladenstein R, Schulte JH, Noguera R, Stallings RL, Van Damme A, Laureys G, Vermeulen J, Van Maerken T, Speleman F, Vandesompele J.

Genome Biol. 2012 Oct 3;13(10):R95. [Epub ahead of print]

PMID:
23034519
[PubMed - as supplied by publisher]
Free PMC Article
4.

The microRNA body map: dissecting microRNA function through integrative genomics.

Mestdagh P, Lefever S, Pattyn F, Ridzon D, Fredlund E, Fieuw A, Ongenaert M, Vermeulen J, De Paepe A, Wong L, Speleman F, Chen C, Vandesompele J.

Nucleic Acids Res. 2011 Nov 1;39(20):e136. doi: 10.1093/nar/gkr646. Epub 2011 Aug 10.

PMID:
21835775
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Neuroblastoma epigenetics: from candidate gene approaches to genome-wide screenings.

Decock A, Ongenaert M, Vandesompele J, Speleman F.

Epigenetics. 2011 Aug;6(8):962-70. doi: 10.4161/epi.6.8.16516. Epub 2011 Aug 1. Review.

PMID:
21725203
[PubMed - indexed for MEDLINE]
Free Article
6.

Jasmonate response of the Nicotiana tabacum agglutinin promoter in Arabidopsis thaliana.

Delporte A, Lannoo N, Vandenborre G, Ongenaert M, Van Damme EJ.

Plant Physiol Biochem. 2011 Aug;49(8):843-51. doi: 10.1016/j.plaphy.2011.04.011. Epub 2011 May 1.

PMID:
21570857
[PubMed - indexed for MEDLINE]
7.

Epigenetic databases and computational methodologies in the analysis of epigenetic datasets.

Ongenaert M.

Adv Genet. 2010;71:259-95. doi: 10.1016/B978-0-12-380864-6.00009-2. Review.

PMID:
20933132
[PubMed - indexed for MEDLINE]
8.

The N-myc downstream regulated gene (NDRG) family: diverse functions, multiple applications.

Melotte V, Qu X, Ongenaert M, van Criekinge W, de Bruïne AP, Baldwin HS, van Engeland M.

FASEB J. 2010 Nov;24(11):4153-66. doi: 10.1096/fj.09-151464. Epub 2010 Jul 28. Review.

PMID:
20667976
[PubMed - indexed for MEDLINE]
Free Article
9.

Proteins with an Euonymus lectin-like domain are ubiquitous in Embryophyta.

Fouquaert E, Peumans WJ, Vandekerckhove TT, Ongenaert M, Van Damme EJ.

BMC Plant Biol. 2009 Nov 23;9:136. doi: 10.1186/1471-2229-9-136.

PMID:
19930663
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Discovery of DNA methylation markers in cervical cancer using relaxation ranking.

Ongenaert M, Wisman GB, Volders HH, Koning AJ, Zee AG, van Criekinge W, Schuuring E.

BMC Med Genomics. 2008 Nov 24;1:57. doi: 10.1186/1755-8794-1-57.

PMID:
19025626
[PubMed]
Free PMC Article
11.

Critical evaluation of the use of bioinformatics as a theoretical tool to find high-potential sources of ACE inhibitory peptides.

Vercruysse L, Smagghe G, van der Bent A, van Amerongen A, Ongenaert M, Van Camp J.

Peptides. 2009 Mar;30(3):575-82. doi: 10.1016/j.peptides.2008.06.027. Epub 2008 Jul 4.

PMID:
18655819
[PubMed - indexed for MEDLINE]
12.

Genome-wide promoter analysis uncovers portions of the cancer methylome.

Hoque MO, Kim MS, Ostrow KL, Liu J, Wisman GB, Park HL, Poeta ML, Jeronimo C, Henrique R, Lendvai A, Schuuring E, Begum S, Rosenbaum E, Ongenaert M, Yamashita K, Califano J, Westra W, van der Zee AG, Van Criekinge W, Sidransky D.

Cancer Res. 2008 Apr 15;68(8):2661-70. doi: 10.1158/0008-5472.CAN-07-5913.

PMID:
18413733
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

PubMeth: a cancer methylation database combining text-mining and expert annotation.

Ongenaert M, Van Neste L, De Meyer T, Menschaert G, Bekaert S, Van Criekinge W.

Nucleic Acids Res. 2008 Jan;36(Database issue):D842-6. Epub 2007 Oct 11.

PMID:
17932060
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Phylogenetic and specificity studies of two-domain GNA-related lectins: generation of multispecificity through domain duplication and divergent evolution.

Van Damme EJ, Nakamura-Tsuruta S, Smith DF, Ongenaert M, Winter HC, Rougé P, Goldstein IJ, Mo H, Kominami J, Culerrier R, Barre A, Hirabayashi J, Peumans WJ.

Biochem J. 2007 May 15;404(1):51-61.

PMID:
17288538
[PubMed - indexed for MEDLINE]
Free PMC Article

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