Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 62

1.

BalestraWeb: efficient online evaluation of drug-target interactions.

Cobanoglu MC, Oltvai ZN, Taylor DL, Bahar I.

Bioinformatics. 2014 Sep 5. pii: btu599. [Epub ahead of print]

PMID:
25192741
[PubMed - as supplied by publisher]
Free Article
2.

Significance of p53 dynamics in regulating apoptosis in response to ionizing radiation, and polypharmacological strategies.

Liu B, Bhatt D, Oltvai ZN, Greenberger JS, Bahar I.

Sci Rep. 2014 Sep 1;4:6245. doi: 10.1038/srep06245.

PMID:
25175563
[PubMed - in process]
Free PMC Article
3.

Carbon catabolite repression correlates with the maintenance of near invariant molecular crowding in proliferating E. coli cells.

Zhou Y, Vazquez A, Wise A, Warita T, Warita K, Bar-Joseph Z, Oltvai ZN.

BMC Syst Biol. 2013 Dec 12;7:138. doi: 10.1186/1752-0509-7-138.

PMID:
24330501
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Predicting drug-target interactions using probabilistic matrix factorization.

Cobanoglu MC, Liu C, Hu F, Oltvai ZN, Bahar I.

J Chem Inf Model. 2013 Dec 23;53(12):3399-409. doi: 10.1021/ci400219z. Epub 2013 Dec 10.

PMID:
24289468
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The metabolic demands of cancer cells are coupled to their size and protein synthesis rates.

Dolfi SC, Chan LL, Qiu J, Tedeschi PM, Bertino JR, Hirshfield KM, Oltvai ZN, Vazquez A.

Cancer Metab. 2013 Nov 7;1(1):20. doi: 10.1186/2049-3002-1-20.

PMID:
24279929
[PubMed]
Free PMC Article
6.

Contribution of serine, folate and glycine metabolism to the ATP, NADPH and purine requirements of cancer cells.

Tedeschi PM, Markert EK, Gounder M, Lin H, Dvorzhinski D, Dolfi SC, Chan LL, Qiu J, DiPaola RS, Hirshfield KM, Boros LG, Bertino JR, Oltvai ZN, Vazquez A.

Cell Death Dis. 2013 Oct 24;4:e877. doi: 10.1038/cddis.2013.393.

PMID:
24157871
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Identifying ligand binding conformations of the β2-adrenergic receptor by using its agonists as computational probes.

Isin B, Estiu G, Wiest O, Oltvai ZN.

PLoS One. 2012;7(12):e50186. doi: 10.1371/journal.pone.0050186. Epub 2012 Dec 31.

PMID:
23300522
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Ongoing technological revolution. Preface.

Wells A, Oltvai ZN.

Clin Lab Med. 2012 Dec;32(4):ix-x. doi: 10.1016/j.cll.2012.07.007. No abstract available.

PMID:
23078666
[PubMed - indexed for MEDLINE]
9.

Workflow organization in pathology.

Park S, Pantanowitz L, Parwani AV, Wells A, Oltvai ZN.

Clin Lab Med. 2012 Dec;32(4):601-22. doi: 10.1016/j.cll.2012.07.008. Review.

PMID:
23078662
[PubMed - indexed for MEDLINE]
10.

Identification of motions in membrane proteins by elastic network models and their experimental validation.

Isin B, Tirupula KC, Oltvai ZN, Klein-Seetharaman J, Bahar I.

Methods Mol Biol. 2012;914:285-317. doi: 10.1007/978-1-62703-023-6_17.

PMID:
22976035
[PubMed - indexed for MEDLINE]
11.

Matching experiments across species using expression values and textual information.

Wise A, Oltvai ZN, Bar-Joseph Z.

Bioinformatics. 2012 Jun 15;28(12):i258-64. doi: 10.1093/bioinformatics/bts205.

PMID:
22689770
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Serine biosynthesis with one carbon catabolism and the glycine cleavage system represents a novel pathway for ATP generation.

Vazquez A, Markert EK, Oltvai ZN.

PLoS One. 2011;6(11):e25881. doi: 10.1371/journal.pone.0025881. Epub 2011 Nov 2.

PMID:
22073143
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Molecular crowding defines a common origin for the Warburg effect in proliferating cells and the lactate threshold in muscle physiology.

Vazquez A, Oltvai ZN.

PLoS One. 2011 Apr 29;6(4):e19538. doi: 10.1371/journal.pone.0019538.

PMID:
21559344
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Cross-species queries of large gene expression databases.

Le HS, Oltvai ZN, Bar-Joseph Z.

Bioinformatics. 2010 Oct 1;26(19):2416-23. doi: 10.1093/bioinformatics/btq451. Epub 2010 Aug 11.

PMID:
20702396
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Identification of novel bacterial histidine biosynthesis inhibitors using docking, ensemble rescoring, and whole-cell assays.

Henriksen ST, Liu J, Estiu G, Oltvai ZN, Wiest O.

Bioorg Med Chem. 2010 Jul 15;18(14):5148-56. doi: 10.1016/j.bmc.2010.05.060. Epub 2010 Jun 1.

PMID:
20573514
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Catabolic efficiency of aerobic glycolysis: the Warburg effect revisited.

Vazquez A, Liu J, Zhou Y, Oltvai ZN.

BMC Syst Biol. 2010 May 6;4:58. doi: 10.1186/1752-0509-4-58.

PMID:
20459610
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Blueprint for antimicrobial hit discovery targeting metabolic networks.

Shen Y, Liu J, Estiu G, Isin B, Ahn YY, Lee DS, Barabási AL, Kapatral V, Wiest O, Oltvai ZN.

Proc Natl Acad Sci U S A. 2010 Jan 19;107(3):1082-7. doi: 10.1073/pnas.0909181107. Epub 2010 Jan 5.

PMID:
20080587
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Computational disease modeling - fact or fiction?

Tegnér JN, Compte A, Auffray C, An G, Cedersund G, Clermont G, Gutkin B, Oltvai ZN, Stephan KE, Thomas R, Villoslada P.

BMC Syst Biol. 2009 Jun 4;3:56. doi: 10.1186/1752-0509-3-56.

PMID:
19497118
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Comparative genome-scale metabolic reconstruction and flux balance analysis of multiple Staphylococcus aureus genomes identify novel antimicrobial drug targets.

Lee DS, Burd H, Liu J, Almaas E, Wiest O, Barabási AL, Oltvai ZN, Kapatral V.

J Bacteriol. 2009 Jun;191(12):4015-24. doi: 10.1128/JB.01743-08. Epub 2009 Apr 17.

PMID:
19376871
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Impact of limited solvent capacity on metabolic rate, enzyme activities, and metabolite concentrations of S. cerevisiae glycolysis.

Vazquez A, de Menezes MA, Barabási AL, Oltvai ZN.

PLoS Comput Biol. 2008 Oct;4(10):e1000195. doi: 10.1371/journal.pcbi.1000195. Epub 2008 Oct 10.

PMID:
18846199
[PubMed - indexed for MEDLINE]
Free PMC Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Loading ...
Write to the Help Desk