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Items: 1 to 20 of 143


Cospeciation of gut microbiota with hominids.

Moeller AH, Caro-Quintero A, Mjungu D, Georgiev AV, Lonsdorf EV, Muller MN, Pusey AE, Peeters M, Hahn BH, Ochman H.

Science. 2016 Jul 22;353(6297):380-2. doi: 10.1126/science.aaf3951.


Human symbionts inject and neutralize antibacterial toxins to persist in the gut.

Wexler AG, Bao Y, Whitney JC, Bobay LM, Xavier JB, Schofield WB, Barry NA, Russell AB, Tran BQ, Goo YA, Goodlett DR, Ochman H, Mougous JD, Goodman AL.

Proc Natl Acad Sci U S A. 2016 Mar 29;113(13):3639-44. doi: 10.1073/pnas.1525637113. Epub 2016 Mar 8.


Realizing Microbial Evolution.

Ochman H.

Cold Spring Harb Perspect Biol. 2016 May 2;8(5). pii: a018101. doi: 10.1101/cshperspect.a018101. Review.


Conserved rates and patterns of transcription errors across bacterial growth states and lifestyles.

Traverse CC, Ochman H.

Proc Natl Acad Sci U S A. 2016 Mar 22;113(12):3311-6. doi: 10.1073/pnas.1525329113. Epub 2016 Feb 16. Erratum in: Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):E4257-8.


Social behavior shapes the chimpanzee pan-microbiome.

Moeller AH, Foerster S, Wilson ML, Pusey AE, Hahn BH, Ochman H.

Sci Adv. 2016 Jan 15;2(1):e1500997. doi: 10.1126/sciadv.1500997. eCollection 2016 Jan.


Assessing the Unseen Bacterial Diversity in Microbial Communities.

Caro-Quintero A, Ochman H.

Genome Biol Evol. 2015 Nov 27;7(12):3416-25. doi: 10.1093/gbe/evv234.


Impermanence of bacterial clones.

Bobay LM, Traverse CC, Ochman H.

Proc Natl Acad Sci U S A. 2015 Jul 21;112(29):8893-900. doi: 10.1073/pnas.1501724112.


Effects of Genic Base Composition on Growth Rate in G+C-rich Genomes.

Kelkar YD, Phillips DS, Ochman H.

G3 (Bethesda). 2015 Apr 20;5(6):1247-52. doi: 10.1534/g3.115.016824. Erratum in: G3 (Bethesda). 2015 Dec;5(12):2921.


Where next for microbiome research?

Waldor MK, Tyson G, Borenstein E, Ochman H, Moeller A, Finlay BB, Kong HH, Gordon JI, Nelson KE, Dabbagh K, Smith H.

PLoS Biol. 2015 Jan 20;13(1):e1002050. doi: 10.1371/journal.pbio.1002050. eCollection 2015 Jan.


Genome rearrangements can make and break small RNA genes.

Raghavan R, Kacharia FR, Millar JA, Sislak CD, Ochman H.

Genome Biol Evol. 2015 Jan 18;7(2):557-66. doi: 10.1093/gbe/evv009.


Stability of the gorilla microbiome despite simian immunodeficiency virus infection.

Moeller AH, Peeters M, Ayouba A, Ngole EM, Esteban A, Hahn BH, Ochman H.

Mol Ecol. 2015 Feb;24(3):690-7. doi: 10.1111/mec.13057. Epub 2015 Jan 19.


Rapid changes in the gut microbiome during human evolution.

Moeller AH, Li Y, Mpoudi Ngole E, Ahuka-Mundeke S, Lonsdorf EV, Pusey AE, Peeters M, Hahn BH, Ochman H.

Proc Natl Acad Sci U S A. 2014 Nov 18;111(46):16431-5. doi: 10.1073/pnas.1419136111. Epub 2014 Nov 3.


Microbiomes are true to type.

Moeller AH, Ochman H.

Proc Natl Acad Sci U S A. 2014 Jul 1;111(26):9372-3. doi: 10.1073/pnas.1408654111. Epub 2014 Jun 17. No abstract available.


Disentangling associated genomes.

Sloan DB, Bennett GM, Engel P, Williams D, Ochman H.

Methods Enzymol. 2013;531:445-64. doi: 10.1016/B978-0-12-407863-5.00020-4.


SIV-induced instability of the chimpanzee gut microbiome.

Moeller AH, Shilts M, Li Y, Rudicell RS, Lonsdorf EV, Pusey AE, Wilson ML, Hahn BH, Ochman H.

Cell Host Microbe. 2013 Sep 11;14(3):340-5. doi: 10.1016/j.chom.2013.08.005.


Factors that drive variation among gut microbial communities.

Moeller AH, Ochman H.

Gut Microbes. 2013 Sep-Oct;4(5):403-8. doi: 10.4161/gmic.26039. Epub 2013 Aug 9.


Rapid quantification of sequence repeats to resolve the size, structure and contents of bacterial genomes.

Williams D, Trimble WL, Shilts M, Meyer F, Ochman H.

BMC Genomics. 2013 Aug 8;14:537. doi: 10.1186/1471-2164-14-537.


Sympatric chimpanzees and gorillas harbor convergent gut microbial communities.

Moeller AH, Peeters M, Ndjango JB, Li Y, Hahn BH, Ochman H.

Genome Res. 2013 Oct;23(10):1715-20. doi: 10.1101/gr.154773.113. Epub 2013 Jun 26.


Chimpanzees and humans harbour compositionally similar gut enterotypes.

Moeller AH, Degnan PH, Pusey AE, Wilson ML, Hahn BH, Ochman H.

Nat Commun. 2012;3:1179. doi: 10.1038/ncomms2159.


Genome reduction promotes increase in protein functional complexity in bacteria.

Kelkar YD, Ochman H.

Genetics. 2013 Jan;193(1):303-7. doi: 10.1534/genetics.112.145656. Epub 2012 Oct 31.

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