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Results: 10

1.

Efficient de novo assembly of large and complex genomes by massively parallel sequencing of Fosmid pools.

Alexeyenko A, Nystedt B, Vezzi F, Sherwood E, Ye R, Knudsen B, Simonsen M, Turner B, de Jong P, Wu CC, Lundeberg J.

BMC Genomics. 2014 Jun 6;15:439. doi: 10.1186/1471-2164-15-439.

PMID:
24906298
[PubMed - in process]
Free PMC Article
2.

The Norway spruce genome sequence and conifer genome evolution.

Nystedt B, Street NR, Wetterbom A, Zuccolo A, Lin YC, Scofield DG, Vezzi F, Delhomme N, Giacomello S, Alexeyenko A, Vicedomini R, Sahlin K, Sherwood E, Elfstrand M, Gramzow L, Holmberg K, Hällman J, Keech O, Klasson L, Koriabine M, Kucukoglu M, Käller M, Luthman J, Lysholm F, Niittylä T, Olson A, Rilakovic N, Ritland C, Rosselló JA, Sena J, Svensson T, Talavera-López C, Theißen G, Tuominen H, Vanneste K, Wu ZQ, Zhang B, Zerbe P, Arvestad L, Bhalerao R, Bohlmann J, Bousquet J, Garcia Gil R, Hvidsten TR, de Jong P, MacKay J, Morgante M, Ritland K, Sundberg B, Thompson SL, Van de Peer Y, Andersson B, Nilsson O, Ingvarsson PK, Lundeberg J, Jansson S.

Nature. 2013 May 30;497(7451):579-84. doi: 10.1038/nature12211. Epub 2013 May 22.

PMID:
23698360
[PubMed - indexed for MEDLINE]
3.

A gene transfer agent and a dynamic repertoire of secretion systems hold the keys to the explosive radiation of the emerging pathogen Bartonella.

Guy L, Nystedt B, Toft C, Zaremba-Niedzwiedzka K, Berglund EC, Granberg F, Näslund K, Eriksson AS, Andersson SG.

PLoS Genet. 2013 Mar;9(3):e1003393. doi: 10.1371/journal.pgen.1003393. Epub 2013 Mar 28.

PMID:
23555299
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Hierarchical molecular tagging to resolve long continuous sequences by massively parallel sequencing.

Lundin S, Gruselius J, Nystedt B, Lexow P, Käller M, Lundeberg J.

Sci Rep. 2013;3:1186. doi: 10.1038/srep01186.

PMID:
23470464
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Genomic insights into the atopic eczema-associated skin commensal yeast Malassezia sympodialis.

Gioti A, Nystedt B, Li W, Xu J, Andersson A, Averette AF, Münch K, Wang X, Kappauf C, Kingsbury JM, Kraak B, Walker LA, Johansson HJ, Holm T, Lehtiö J, Stajich JE, Mieczkowski P, Kahmann R, Kennell JC, Cardenas ME, Lundeberg J, Saunders CW, Boekhout T, Dawson TL, Munro CA, de Groot PW, Butler G, Heitman J, Scheynius A.

MBio. 2013 Jan 22;4(1):e00572-12. doi: 10.1128/mBio.00572-12.

PMID:
23341551
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A genome-wide study of recombination rate variation in Bartonella henselae.

Guy L, Nystedt B, Sun Y, Näslund K, Berglund EC, Andersson SG.

BMC Evol Biol. 2012 May 11;12:65. doi: 10.1186/1471-2148-12-65.

PMID:
22577862
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Amplified fragment length polymorphism (AFLP) analysis of closely related wild and captive tsetse fly (Glossina morsitans morsitans) populations.

Lall GK, Darby AC, Nystedt B, Macleod ET, Bishop RP, Welburn SC.

Parasit Vectors. 2010 May 26;3:47. doi: 10.1186/1756-3305-3-47.

PMID:
20504326
[PubMed]
Free PMC Article
8.

Computational resources in infectious disease: limitations and challenges.

Berglund EC, Nystedt B, Andersson SG.

PLoS Comput Biol. 2009 Oct;5(10):e1000481. doi: 10.1371/journal.pcbi.1000481. Epub 2009 Oct 26. Review. No abstract available.

PMID:
19855825
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Endosymbiont gene functions impaired and rescued by polymerase infidelity at poly(A) tracts.

Tamas I, Wernegreen JJ, Nystedt B, Kauppinen SN, Darby AC, Gomez-Valero L, Lundin D, Poole AM, Andersson SG.

Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14934-9. doi: 10.1073/pnas.0806554105. Epub 2008 Sep 24.

PMID:
18815381
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Diversifying selection and concerted evolution of a type IV secretion system in Bartonella.

Nystedt B, Frank AC, Thollesson M, Andersson SG.

Mol Biol Evol. 2008 Feb;25(2):287-300. Epub 2007 Dec 7.

PMID:
18065487
[PubMed - indexed for MEDLINE]
Free Article

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