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Results: 1 to 20 of 101

1.

Population genomic analysis uncovers African and European admixture in Drosophila melanogaster populations from the south-eastern United States and Caribbean Islands.

Kao JY, Zubair A, Salomon MP, Nuzhdin SV, Campo D.

Mol Ecol. 2015 Apr;24(7):1499-509. doi: 10.1111/mec.13137.

PMID:
25735402
2.

The ecological genomic basis of salinity adaptation in Tunisian Medicago truncatula.

Friesen ML, von Wettberg EJ, Badri M, Moriuchi KS, Barhoumi F, Chang PL, Cuellar-Ortiz S, Cordeiro MA, Vu WT, Arraouadi S, Djébali N, Zribi K, Badri Y, Porter SS, Aouani ME, Cook DR, Strauss SY, Nuzhdin SV.

BMC Genomics. 2014 Dec 22;15:1160. doi: 10.1186/1471-2164-15-1160.

3.

GBshape: a genome browser database for DNA shape annotations.

Chiu TP, Yang L, Zhou T, Main BJ, Parker SC, Nuzhdin SV, Tullius TD, Rohs R.

Nucleic Acids Res. 2015 Jan;43(Database issue):D103-9. doi: 10.1093/nar/gku977. Epub 2014 Oct 17.

4.

Genetic variation in niche construction and its implications: response to Shuker.

Saltz JB, Nuzhdin SV.

Trends Ecol Evol. 2014 Jun;29(6):304-5. doi: 10.1016/j.tree.2014.03.009. Epub 2014 Apr 13. No abstract available.

PMID:
24735777
5.

What the X has to do with it: differences in regulatory variability between the sexes in Drosophila simulans.

Graze RM, McIntyre LM, Morse AM, Boyd BM, Nuzhdin SV, Wayne ML.

Genome Biol Evol. 2014 Apr;6(4):818-29. doi: 10.1093/gbe/evu060.

6.

Population differentiation for germination and early seedling root growth traits under saline conditions in the annual legume Medicago truncatula (Fabaceae).

Cordeiro MA, Moriuchi KS, Fotinos TD, Miller KE, Nuzhdin SV, von Wettberg EJ, Cook DR.

Am J Bot. 2014 Mar;101(3):488-98. doi: 10.3732/ajb.1300285. Epub 2014 Mar 17.

7.

Paternally transmitted mitochondria express a new gene of potential viral origin.

Milani L, Ghiselli F, Maurizii MG, Nuzhdin SV, Passamonti M.

Genome Biol Evol. 2014 Feb;6(2):391-405. doi: 10.1093/gbe/evu021.

8.

Genomic changes under rapid evolution: selection for parasitoid resistance.

Jalvingh KM, Chang PL, Nuzhdin SV, Wertheim B.

Proc Biol Sci. 2014 Feb 5;281(1779):20132303. doi: 10.1098/rspb.2013.2303. Print 2014 Mar 22.

9.

Promises and limitations of hitchhiking mapping.

Nuzhdin SV, Turner TL.

Curr Opin Genet Dev. 2013 Dec;23(6):694-9. doi: 10.1016/j.gde.2013.10.002. Epub 2013 Nov 12. Review.

10.

Genetic variation in niche construction: implications for development and evolutionary genetics.

Saltz JB, Nuzhdin SV.

Trends Ecol Evol. 2014 Jan;29(1):8-14. doi: 10.1016/j.tree.2013.09.011. Epub 2013 Oct 11.

11.

Whole-genome sequencing of two North American Drosophila melanogaster populations reveals genetic differentiation and positive selection.

Campo D, Lehmann K, Fjeldsted C, Souaiaia T, Kao J, Nuzhdin SV.

Mol Ecol. 2013 Oct;22(20):5084-97. doi: 10.1111/mec.12468. Epub 2013 Sep 19.

12.

Structure, transcription, and variability of metazoan mitochondrial genome: perspectives from an unusual mitochondrial inheritance system.

Ghiselli F, Milani L, Guerra D, Chang PL, Breton S, Nuzhdin SV, Passamonti M.

Genome Biol Evol. 2013;5(8):1535-54. doi: 10.1093/gbe/evt112.

13.

Nuclear genes with sex bias in Ruditapes philippinarum (Bivalvia, veneridae): Mitochondrial inheritance and sex determination in DUI species.

Milani L, Ghiselli F, Nuzhdin SV, Passamonti M.

J Exp Zool B Mol Dev Evol. 2013 Jul 19. doi: 10.1002/jez.b.22520. [Epub ahead of print]

PMID:
23873694
14.

Post-GWAS: where next? More samples, more SNPs or more biology?

Marjoram P, Zubair A, Nuzhdin SV.

Heredity (Edinb). 2014 Jan;112(1):79-88. doi: 10.1038/hdy.2013.52. Epub 2013 Jun 12. Review.

15.

Transcription start site evolution in Drosophila.

Main BJ, Smith AD, Jang H, Nuzhdin SV.

Mol Biol Evol. 2013 Aug;30(8):1966-74. doi: 10.1093/molbev/mst085. Epub 2013 May 6.

16.

Identification of gene expression changes associated with long-term memory of courtship rejection in Drosophila males.

Winbush A, Reed D, Chang PL, Nuzhdin SV, Lyons LC, Arbeitman MN.

G3 (Bethesda). 2012 Nov;2(11):1437-45. doi: 10.1534/g3.112.004119. Epub 2012 Nov 1.

17.

Genomic basis of aging and life-history evolution in Drosophila melanogaster.

Remolina SC, Chang PL, Leips J, Nuzhdin SV, Hughes KA.

Evolution. 2012 Nov;66(11):3390-403. doi: 10.1111/j.1558-5646.2012.01710.x. Epub 2012 Jun 27.

PMID:
23106705
18.

Genotype-phenotype mapping in a post-GWAS world.

Nuzhdin SV, Friesen ML, McIntyre LM.

Trends Genet. 2012 Sep;28(9):421-6. doi: 10.1016/j.tig.2012.06.003. Epub 2012 Jul 18.

19.

Genetic variation in the Yolk protein expression network of Drosophila melanogaster: sex-biased negative correlations with longevity.

Tarone AM, McIntyre LM, Harshman LG, Nuzhdin SV.

Heredity (Edinb). 2012 Oct;109(4):226-34. doi: 10.1038/hdy.2012.34. Epub 2012 Jul 4.

20.

Nonadditive indirect effects of group genetic diversity on larval viability in Drosophila melanogaster imply key role of maternal decision-making.

Saltz JB, Alicuben ET, Grubman J, Harkenrider M, Megowan N, Nuzhdin SV.

Mol Ecol. 2012 May;21(9):2270-81. doi: 10.1111/j.1365-294X.2012.05518.x. Epub 2012 Mar 8.

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