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Items: 1 to 20 of 537

1.

Critical Nucleus Structure and Aggregation Mechanism of the C-terminal Fragment of SOD1 Protein.

Zou Y, Sun Y, Zhu Y, Ma B, Nussinov R, Zhang Q.

ACS Chem Neurosci. 2016 Jan 27. [Epub ahead of print]

PMID:
26815332
2.

Ras Conformational Ensembles, Allostery, and Signaling.

Lu S, Jang H, Muratcioglu S, Gursoy A, Keskin O, Nussinov R, Zhang J.

Chem Rev. 2016 Jan 27. [Epub ahead of print]

PMID:
26815308
3.
4.

Comparison of the Conformations of KRAS Isoforms, K-Ras4A and K-Ras4B, Points to Similarities and Significant Differences.

Chakrabarti M, Jang H, Nussinov R.

J Phys Chem B. 2016 Feb 4;120(4):667-79. doi: 10.1021/acs.jpcb.5b11110. Epub 2016 Jan 27.

PMID:
26761128
5.

The higher level of complexity of K-Ras4B activation at the membrane.

Jang H, Banerjee A, Chavan TS, Lu S, Zhang J, Gaponenko V, Nussinov R.

FASEB J. 2015 Dec 30. pii: fj.15-279091. [Epub ahead of print]

PMID:
26718888
6.

The disordered hypervariable region and the folded catalytic domain of oncogenic K-Ras4B partner in phospholipid binding.

Banerjee A, Jang H, Nussinov R, Gaponenko V.

Curr Opin Struct Biol. 2015 Dec 19;36:10-17. doi: 10.1016/j.sbi.2015.11.010. [Epub ahead of print] Review.

PMID:
26709496
7.

High-Affinity Interaction of the K-Ras4B Hypervariable Region with the Ras Active Site.

Chavan TS, Jang H, Khavrutskii L, Abraham SJ, Banerjee A, Freed BC, Johannessen L, Tarasov SG, Gaponenko V, Nussinov R, Tarasova NI.

Biophys J. 2015 Dec 15;109(12):2602-13. doi: 10.1016/j.bpj.2015.09.034.

8.

Allosteric stabilization of the amyloid-β peptide hairpin by the fluctuating N-terminal.

Xu L, Nussinov R, Ma B.

Chem Commun (Camb). 2016 Jan 28;52(8):1733-6. doi: 10.1039/c5cc08107f. Epub 2015 Dec 15.

PMID:
26666686
9.

A New View of Ras Isoforms in Cancers.

Nussinov R, Tsai CJ, Chakrabarti M, Jang H.

Cancer Res. 2016 Jan 1;76(1):18-23. doi: 10.1158/0008-5472.CAN-15-1536. Epub 2015 Dec 10. Review.

PMID:
26659836
10.

Dimerization of the SP1 Region of HIV-1 Gag Induces a Helical Conformation and Association into Helical Bundles: Implications for Particle Assembly.

Datta SA, Clark PK, Fan L, Ma B, Harvin DP, Sowder RC 2nd, Nussinov R, Wang YX, Rein A.

J Virol. 2015 Dec 4;90(4):1773-87. doi: 10.1128/JVI.02061-15.

PMID:
26637452
11.

Inhibitors of Ras-SOS Interactions.

Lu S, Jang H, Zhang J, Nussinov R.

ChemMedChem. 2015 Dec 2. doi: 10.1002/cmdc.201500481. [Epub ahead of print]

PMID:
26630662
12.

Tandem Domains with Tuned Interactions Are a Powerful Biological Design Principle.

Nussinov R, Tsai CJ.

PLoS Biol. 2015 Nov 30;13(11):e1002306. doi: 10.1371/journal.pbio.1002306. eCollection 2015 Nov.

13.

Computational Methods for Exploration and Analysis of Macromolecular Structure and Dynamics.

Shehu A, Nussinov R.

PLoS Comput Biol. 2015 Oct 27;11(10):e1004585. doi: 10.1371/journal.pcbi.1004585. eCollection 2015 Oct. No abstract available.

14.

Principles of K-Ras effector organization and the role of oncogenic K-Ras in cancer initiation through G1 cell cycle deregulation.

Nussinov R, Tsai CJ, Muratcioglu S, Jang H, Gursoy A, Keskin O.

Expert Rev Proteomics. 2015 Dec;12(6):669-82. doi: 10.1586/14789450.2015.1100079. Epub 2015 Oct 23.

PMID:
26496174
15.

GTP Binding and Oncogenic Mutations May Attenuate Hypervariable Region (HVR)-Catalytic Domain Interactions in Small GTPase K-Ras4B, Exposing the Effector Binding Site.

Lu S, Banerjee A, Jang H, Zhang J, Gaponenko V, Nussinov R.

J Biol Chem. 2015 Nov 27;290(48):28887-900. doi: 10.1074/jbc.M115.664755. Epub 2015 Oct 9.

PMID:
26453300
16.

Computational Methods for Structural and Functional Studies of Alzheimer's Amyloid Ion Channels.

Jang H, Arce FT, Lee J, Gillman AL, Ramachandran S, Kagan BL, Lal R, Nussinov R.

Methods Mol Biol. 2016;1345:251-68. doi: 10.1007/978-1-4939-2978-8_16.

PMID:
26453217
17.

Effects of the C-Terminal Tail on the Conformational Dynamics of Human Neuronal Calcium Sensor-1 Protein.

Zhu Y, Yang S, Qi R, Zou Y, Ma B, Nussinov R, Zhang Q.

J Phys Chem B. 2015 Nov 5;119(44):14236-44. doi: 10.1021/acs.jpcb.5b07962. Epub 2015 Oct 16.

PMID:
26447771
18.

Amylin-Aβ oligomers at atomic resolution using molecular dynamics simulations: a link between Type 2 diabetes and Alzheimer's disease.

Baram M, Atsmon-Raz Y, Ma B, Nussinov R, Miller Y.

Phys Chem Chem Phys. 2016 Jan 20;18(4):2330-8. doi: 10.1039/c5cp03338a.

19.

Mapping the Conformation Space of Wildtype and Mutant H-Ras with a Memetic, Cellular, and Multiscale Evolutionary Algorithm.

Clausen R, Ma B, Nussinov R, Shehu A.

PLoS Comput Biol. 2015 Sep 1;11(9):e1004470. doi: 10.1371/journal.pcbi.1004470. eCollection 2015 Sep.

20.

The Architecture of the TIR Domain Signalosome in the Toll-like Receptor-4 Signaling Pathway.

Guven-Maiorov E, Keskin O, Gursoy A, VanWaes C, Chen Z, Tsai CJ, Nussinov R.

Sci Rep. 2015 Aug 21;5:13128. doi: 10.1038/srep13128.

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