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Results: 14

1.

Fine-Mapping Additive and Dominant SNP Effects Using Group-LASSO and Fractional Resample Model Averaging.

Sabourin J, Nobel AB, Valdar W.

Genet Epidemiol. 2014 Nov 21. doi: 10.1002/gepi.21869. [Epub ahead of print]

PMID:
25417853
[PubMed - as supplied by publisher]
2.
3.

JOINT AND INDIVIDUAL VARIATION EXPLAINED (JIVE) FOR INTEGRATED ANALYSIS OF MULTIPLE DATA TYPES.

Lock EF, Hoadley KA, Marron JS, Nobel AB.

Ann Appl Stat. 2013 Mar 1;7(1):523-542.

PMID:
23745156
[PubMed]
Free PMC Article
4.

DiNAMIC: a method to identify recurrent DNA copy number aberrations in tumors.

Walter V, Nobel AB, Wright FA.

Bioinformatics. 2011 Mar 1;27(5):678-85. doi: 10.1093/bioinformatics/btq717. Epub 2010 Dec 23.

PMID:
21183584
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Heading down the wrong pathway: on the influence of correlation within gene sets.

Gatti DM, Barry WT, Nobel AB, Rusyn I, Wright FA.

BMC Genomics. 2010 Oct 18;11:574. doi: 10.1186/1471-2164-11-574.

PMID:
20955544
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Rejoinder.

Scharpf RB, Tjelmeland H, Parmigiani G, Nobel AB.

J Am Stat Assoc. 2009 Dec;104(488):1318-1323. No abstract available.

PMID:
21904418
[PubMed]
Free PMC Article
7.

The Set2/Rpd3S pathway suppresses cryptic transcription without regard to gene length or transcription frequency.

Lickwar CR, Rao B, Shabalin AA, Nobel AB, Strahl BD, Lieb JD.

PLoS One. 2009;4(3):e4886. doi: 10.1371/journal.pone.0004886. Epub 2009 Mar 19.

PMID:
19295910
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Supervised risk predictor of breast cancer based on intrinsic subtypes.

Parker JS, Mullins M, Cheang MC, Leung S, Voduc D, Vickery T, Davies S, Fauron C, He X, Hu Z, Quackenbush JF, Stijleman IJ, Palazzo J, Marron JS, Nobel AB, Mardis E, Nielsen TO, Ellis MJ, Perou CM, Bernard PS.

J Clin Oncol. 2009 Mar 10;27(8):1160-7. doi: 10.1200/JCO.2008.18.1370. Epub 2009 Feb 9.

PMID:
19204204
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

A Bayesian model for cross-study differential gene expression.

Scharpf RB, Tjelmeland H, Parmigiani G, Nobel AB.

J Am Stat Assoc. 2009;104(488):1295-1310.

PMID:
21127725
[PubMed]
Free PMC Article
10.

FastMap: fast eQTL mapping in homozygous populations.

Gatti DM, Shabalin AA, Lam TC, Wright FA, Rusyn I, Nobel AB.

Bioinformatics. 2009 Feb 15;25(4):482-9. doi: 10.1093/bioinformatics/btn648. Epub 2008 Dec 17.

PMID:
19091771
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Merging two gene-expression studies via cross-platform normalization.

Shabalin AA, Tjelmeland H, Fan C, Perou CM, Nobel AB.

Bioinformatics. 2008 May 1;24(9):1154-60. doi: 10.1093/bioinformatics/btn083. Epub 2008 Mar 5.

PMID:
18325927
[PubMed - indexed for MEDLINE]
Free Article
12.

Concordance among gene-expression-based predictors for breast cancer.

Fan C, Oh DS, Wessels L, Weigelt B, Nuyten DS, Nobel AB, van't Veer LJ, Perou CM.

N Engl J Med. 2006 Aug 10;355(6):560-9.

PMID:
16899776
[PubMed - indexed for MEDLINE]
Free Article
13.

ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data.

Buck MJ, Nobel AB, Lieb JD.

Genome Biol. 2005;6(11):R97. Epub 2005 Oct 19.

PMID:
16277752
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Significance analysis of functional categories in gene expression studies: a structured permutation approach.

Barry WT, Nobel AB, Wright FA.

Bioinformatics. 2005 May 1;21(9):1943-9. Epub 2005 Jan 12.

PMID:
15647293
[PubMed - indexed for MEDLINE]
Free Article

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