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Results: 1 to 20 of 85

1.

Genetic Determinants of the Network of Primary Metabolism and Their Relationships to Plant Performance in a Maize Recombinant Inbred Line Population.

Wen W, Li K, Alseekh S, Omranian N, Zhao L, Zhou Y, Xiao Y, Jin M, Yang N, Liu H, Florian A, Li W, Pan Q, Nikoloski Z, Yan J, Fernie AR.

Plant Cell. 2015 Jul;27(7):1839-56. doi: 10.1105/tpc.15.00208. Epub 2015 Jul 17.

2.

Context-Specific Metabolic Model Extraction Based on Regularized Least Squares Optimization.

Robaina Estévez S, Nikoloski Z.

PLoS One. 2015 Jul 9;10(7):e0131875. doi: 10.1371/journal.pone.0131875. eCollection 2015.

3.

Pool size measurements facilitate the determination of fluxes at branching points in non-stationary metabolic flux analysis: the case of Arabidopsis thaliana.

Heise R, Fernie AR, Stitt M, Nikoloski Z.

Front Plant Sci. 2015 Jun 2;6:386. doi: 10.3389/fpls.2015.00386. eCollection 2015.

4.

Exploring natural variation of photosynthetic, primary metabolism and growth parameters in a large panel of Capsicum chinense accessions.

Rosado-Souza L, Scossa F, Chaves IS, Kleessen S, Salvador LF, Milagre JC, Finger F, Bhering LL, Sulpice R, Araújo WL, Nikoloski Z, Fernie AR, Nunes-Nesi A.

Planta. 2015 Sep;242(3):677-91. doi: 10.1007/s00425-015-2332-2. Epub 2015 May 26.

PMID:
26007687
5.

Phytotyping(4D) : a light-field imaging system for non-invasive and accurate monitoring of spatio-temporal plant growth.

Apelt F, Breuer D, Nikoloski Z, Stitt M, Kragler F.

Plant J. 2015 May;82(4):693-706. doi: 10.1111/tpj.12833. Epub 2015 Apr 16.

PMID:
25801304
6.

Differential metabolic and coexpression networks of plant metabolism.

Omranian N, Kleessen S, Tohge T, Klie S, Basler G, Mueller-Roeber B, Fernie AR, Nikoloski Z.

Trends Plant Sci. 2015 May;20(5):266-8. doi: 10.1016/j.tplants.2015.02.002. Epub 2015 Mar 16.

PMID:
25791509
7.

Identification and mode of inheritance of quantitative trait loci for secondary metabolite abundance in tomato.

Alseekh S, Tohge T, Wendenberg R, Scossa F, Omranian N, Li J, Kleessen S, Giavalisco P, Pleban T, Mueller-Roeber B, Zamir D, Nikoloski Z, Fernie AR.

Plant Cell. 2015 Mar;27(3):485-512. doi: 10.1105/tpc.114.132266. Epub 2015 Mar 13.

8.

Segmentation of biological multivariate time-series data.

Omranian N, Mueller-Roeber B, Nikoloski Z.

Sci Rep. 2015 Mar 11;5:8937. doi: 10.1038/srep08937.

9.

Integration of metabolomics data into metabolic networks.

Töpfer N, Kleessen S, Nikoloski Z.

Front Plant Sci. 2015 Feb 17;6:49. doi: 10.3389/fpls.2015.00049. eCollection 2015. Review.

10.

Effects of varying nitrogen sources on amino acid synthesis costs in Arabidopsis thaliana under different light and carbon-source conditions.

Arnold A, Sajitz-Hermstein M, Nikoloski Z.

PLoS One. 2015 Feb 23;10(2):e0116536. doi: 10.1371/journal.pone.0116536. eCollection 2015.

11.

Utilizing systems biology to unravel stomatal function and the hierarchies underpinning its control.

Medeiros DB, Daloso DM, Fernie AR, Nikoloski Z, Araújo WL.

Plant Cell Environ. 2015 Aug;38(8):1457-70. doi: 10.1111/pce.12517. Epub 2015 Apr 9.

PMID:
25689387
12.

Young Genes out of the Male: An Insight from Evolutionary Age Analysis of the Pollen Transcriptome.

Cui X, Lv Y, Chen M, Nikoloski Z, Twell D, Zhang D.

Mol Plant. 2015 Jun;8(6):935-45. doi: 10.1016/j.molp.2014.12.008. Epub 2014 Dec 24.

PMID:
25670339
13.

Integration of transcriptomics and metabolomics data specifies the metabolic response of Chlamydomonas to rapamycin treatment.

Kleessen S, Irgang S, Klie S, Giavalisco P, Nikoloski Z.

Plant J. 2015 Mar;81(5):822-35. doi: 10.1111/tpj.12763.

PMID:
25600836
14.

Combined correlation-based network and mQTL analyses efficiently identified loci for branched-chain amino acid, serine to threonine, and proline metabolism in tomato seeds.

Toubiana D, Batushansky A, Tzfadia O, Scossa F, Khan A, Barak S, Zamir D, Fernie AR, Nikoloski Z, Fait A.

Plant J. 2015 Jan;81(1):121-33. doi: 10.1111/tpj.12717. Epub 2014 Dec 16.

PMID:
25359542
15.

Generalized framework for context-specific metabolic model extraction methods.

Robaina Estévez S, Nikoloski Z.

Front Plant Sci. 2014 Sep 19;5:491. doi: 10.3389/fpls.2014.00491. eCollection 2014. Review.

16.

Metabolite profiling and integrative modeling reveal metabolic constraints for carbon partitioning under nitrogen starvation in the green algae Haematococcus pluvialis.

Recht L, Töpfer N, Batushansky A, Sikron N, Gibon Y, Fait A, Nikoloski Z, Boussiba S, Zarka A.

J Biol Chem. 2014 Oct 31;289(44):30387-403. doi: 10.1074/jbc.M114.555144. Epub 2014 Sep 2.

PMID:
25183014
17.

The diabetes-obesity-hypertension nexus in Qatar: evidence from the World Health Survey.

Ali FM, Nikoloski Z, Reka H, Gjebrea O, Mossialos E.

Popul Health Metr. 2014 Aug 28;12:18. doi: 10.1186/1478-7954-12-18. eCollection 2014.

18.

Concurrent conditional clustering of multiple networks: COCONETS.

Kleessen S, Klie S, Nikoloski Z.

PLoS One. 2014 Aug 8;9(8):e103637. doi: 10.1371/journal.pone.0103637. eCollection 2014.

19.

img2net: automated network-based analysis of imaged phenotypes.

Breuer D, Nikoloski Z.

Bioinformatics. 2014 Nov 15;30(22):3291-2. doi: 10.1093/bioinformatics/btu503. Epub 2014 Jul 26.

PMID:
25064565
20.

Analysis of metabolic alterations in Arabidopsis following changes in the carbon dioxide and oxygen partial pressures.

Florian A, Timm S, Nikoloski Z, Tohge T, Bauwe H, Araújo WL, Fernie AR.

J Integr Plant Biol. 2014 Sep;56(9):941-59. doi: 10.1111/jipb.12237. Epub 2014 Aug 25.

PMID:
25040033
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