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"Candidatus Propionivibrio aalborgensis": A Novel Glycogen Accumulating Organism Abundant in Full-Scale Enhanced Biological Phosphorus Removal Plants.

Albertsen M, McIlroy SJ, Stokholm-Bjerregaard M, Karst SM, Nielsen PH.

Front Microbiol. 2016 Jul 4;7:1033. doi: 10.3389/fmicb.2016.01033. eCollection 2016.


Dynamics of the Fouling Layer Microbial Community in a Membrane Bioreactor.

Ziegler AS, McIlroy SJ, Larsen P, Albertsen M, Hansen AA, Heinen N, Nielsen PH.

PLoS One. 2016 Jul 11;11(7):e0158811. doi: 10.1371/journal.pone.0158811. eCollection 2016.


Impact of sludge retention time on the fine composition of the microbial community and extracellular polymeric substances in a membrane bioreactor.

Silva AF, Antunes S, Saunders A, Freitas F, Vieira A, Galinha CF, Nielsen PH, Barreto Crespo MT, Carvalho G.

Appl Microbiol Biotechnol. 2016 Jun 6. [Epub ahead of print]


Integrative microbial community analysis reveals full-scale enhanced biological phosphorus removal under tropical conditions.

Law Y, Kirkegaard RH, Cokro AA, Liu X, Arumugam K, Xie C, Stokholm-Bjerregaard M, Drautz-Moses DI, Nielsen PH, Wuertz S, Williams RB.

Sci Rep. 2016 May 19;6:25719. doi: 10.1038/srep25719.


In vivo gene expression in a Staphylococcus aureus prosthetic joint infection characterized by RNA sequencing and metabolomics: a pilot study.

Xu Y, Maltesen RG, Larsen LH, Schønheyder HC, Le VQ, Nielsen JL, Nielsen PH, Thomsen TR, Nielsen KL.

BMC Microbiol. 2016 May 5;16:80. doi: 10.1186/s12866-016-0695-6.


Phylogenetic diversity and ecophysiology of Candidate phylum Saccharibacteria in activated sludge.

Kindaichi T, Yamaoka S, Uehara R, Ozaki N, Ohashi A, Albertsen M, Nielsen PH, Nielsen JL.

FEMS Microbiol Ecol. 2016 Jun;92(6):fiw078. doi: 10.1093/femsec/fiw078. Epub 2016 Apr 17.


Genomic insights into members of the candidate phylum Hyd24-12 common in mesophilic anaerobic digesters.

Kirkegaard RH, Dueholm MS, McIlroy SJ, Nierychlo M, Karst SM, Albertsen M, Nielsen PH.

ISME J. 2016 Apr 8. doi: 10.1038/ismej.2016.43. [Epub ahead of print]


Durability after aortic valve replacement with the Mitroflow versus the Perimount pericardial bioprosthesis: a single-centre experience in 2393 patients.

Nielsen PH, Hjortdal V, Modrau IS, Jensen H, Kimose HH, Terp K, Poulsen SH, Smerup M, Nielsen SL.

Eur J Cardiothorac Surg. 2016 Jun;49(6):1705-10. doi: 10.1093/ejcts/ezv432. Epub 2016 Mar 16.


Proteomic dataset of the organohalide-respiring bacterium Dehalococcoides mccartyi strain CBDB1 grown on hexachlorobenzene as electron acceptor.

Schiffmann CL, Otto W, Hansen R, Nielsen PH, Adrian L, Seifert J, von Bergen M, Jehmlich N.

Data Brief. 2016 Feb 22;7:253-6. doi: 10.1016/j.dib.2016.02.037. eCollection 2016 Jun.


Genomic and in situ investigations of the novel uncultured Chloroflexi associated with 0092 morphotype filamentous bulking in activated sludge.

McIlroy SJ, Karst SM, Nierychlo M, Dueholm MS, Albertsen M, Kirkegaard RH, Seviour RJ, Nielsen PH.

ISME J. 2016 Sep;10(9):2223-34. doi: 10.1038/ismej.2016.14. Epub 2016 Feb 23.


Detection of Pathogenic Biofilms with Bacterial Amyloid Targeting Fluorescent Probe, CDy11.

Kim JY, Sahu S, Yau YH, Wang X, Shochat SG, Nielsen PH, Dueholm MS, Otzen DE, Lee J, Delos Santos MM, Yam JK, Kang NY, Park SJ, Kwon H, Seviour T, Yang L, Givskov M, Chang YT.

J Am Chem Soc. 2016 Jan 13;138(1):402-7. doi: 10.1021/jacs.5b11357. Epub 2016 Jan 4.


Enhancing metaproteomics--The value of models and defined environmental microbial systems.

Herbst FA, Lünsmann V, Kjeldal H, Jehmlich N, Tholey A, von Bergen M, Nielsen JL, Hettich RL, Seifert J, Nielsen PH.

Proteomics. 2016 Mar;16(5):783-98. doi: 10.1002/pmic.201500305. Epub 2016 Jan 21. Review.


Complete nitrification by a single microorganism.

van Kessel MA, Speth DR, Albertsen M, Nielsen PH, Op den Camp HJ, Kartal B, Jetten MS, Lücker S.

Nature. 2015 Dec 24;528(7583):555-9. doi: 10.1038/nature16459. Epub 2015 Nov 26.


Complete nitrification by Nitrospira bacteria.

Daims H, Lebedeva EV, Pjevac P, Han P, Herbold C, Albertsen M, Jehmlich N, Palatinszky M, Vierheilig J, Bulaev A, Kirkegaard RH, von Bergen M, Rattei T, Bendinger B, Nielsen PH, Wagner M.

Nature. 2015 Dec 24;528(7583):504-9. doi: 10.1038/nature16461. Epub 2015 Nov 26.


Functional bacterial amyloid increases Pseudomonas biofilm hydrophobicity and stiffness.

Zeng G, Vad BS, Dueholm MS, Christiansen G, Nilsson M, Tolker-Nielsen T, Nielsen PH, Meyer RL, Otzen DE.

Front Microbiol. 2015 Oct 7;6:1099. doi: 10.3389/fmicb.2015.01099. eCollection 2015.


One-year clinical and angiographic results of hybrid coronary revascularization.

Modrau IS, Holm NR, Mæng M, Bøtker HE, Christiansen EH, Kristensen SD, Lassen JF, Thuesen L, Nielsen PH; Hybrid Coronary Revascularization Study Group.

J Thorac Cardiovasc Surg. 2015 Nov;150(5):1181-6. doi: 10.1016/j.jtcvs.2015.08.072. Epub 2015 Aug 28.


Limited dissemination of the wastewater treatment plant core resistome.

Munck C, Albertsen M, Telke A, Ellabaan M, Nielsen PH, Sommer MO.

Nat Commun. 2015 Sep 30;6:8452. doi: 10.1038/ncomms9452.


Characterization of the In Situ Ecophysiology of Novel Phylotypes in Nutrient Removal Activated Sludge Treatment Plants.

McIlroy SJ, Awata T, Nierychlo M, Albertsen M, Kindaichi T, Nielsen PH.

PLoS One. 2015 Sep 4;10(9):e0136424. doi: 10.1371/journal.pone.0136424. eCollection 2015.


Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira.

Koch H, Lücker S, Albertsen M, Kitzinger K, Herbold C, Spieck E, Nielsen PH, Wagner M, Daims H.

Proc Natl Acad Sci U S A. 2015 Sep 8;112(36):11371-6. doi: 10.1073/pnas.1506533112. Epub 2015 Aug 24.


The activated sludge ecosystem contains a core community of abundant organisms.

Saunders AM, Albertsen M, Vollertsen J, Nielsen PH.

ISME J. 2016 Jan;10(1):11-20. doi: 10.1038/ismej.2015.117. Epub 2015 Aug 11.

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