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Results: 7

1.

A high-definition view of functional genetic variation from natural yeast genomes.

Bergström A, Simpson JT, Salinas F, Barré B, Parts L, Zia A, Nguyen Ba AN, Moses AM, Louis EJ, Mustonen V, Warringer J, Durbin R, Liti G.

Mol Biol Evol. 2014 Apr;31(4):872-88. doi: 10.1093/molbev/msu037. Epub 2014 Jan 14.

PMID:
24425782
[PubMed - in process]
Free PMC Article
2.

High quality de novo sequencing and assembly of the Saccharomyces arboricolus genome.

Liti G, Nguyen Ba AN, Blythe M, Müller CA, Bergström A, Cubillos FA, Dafhnis-Calas F, Khoshraftar S, Malla S, Mehta N, Siow CC, Warringer J, Moses AM, Louis EJ, Nieduszynski CA.

BMC Genomics. 2013 Jan 31;14:69. doi: 10.1186/1471-2164-14-69.

PMID:
23368932
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Proteome-wide discovery of evolutionary conserved sequences in disordered regions.

Nguyen Ba AN, Yeh BJ, van Dyk D, Davidson AR, Andrews BJ, Weiss EL, Moses AM.

Sci Signal. 2012 Mar 13;5(215):rs1. doi: 10.1126/scisignal.2002515.

PMID:
22416277
[PubMed - indexed for MEDLINE]
Free Article
4.

Predicting kinase substrates using conservation of local motif density.

Lai AC, Nguyen Ba AN, Moses AM.

Bioinformatics. 2012 Apr 1;28(7):962-9. doi: 10.1093/bioinformatics/bts060. Epub 2012 Feb 1.

PMID:
22302575
[PubMed - indexed for MEDLINE]
Free Article
5.

A quantitative literature-curated gold standard for kinase-substrate pairs.

Sharifpoor S, Nguyen Ba AN, Youn JY, van Dyk D, Friesen H, Douglas AC, Kurat CF, Chong YT, Founk K, Moses AM, Andrews BJ.

Genome Biol. 2011;12(4):R39. doi: 10.1186/gb-2011-12-4-r39. Epub 2011 Apr 14. Erratum in: Genome Biol. 2012;13(5):417. Young, Ji-Young [corrected to Youn, Ji-Young].

PMID:
21492431
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Evolution of characterized phosphorylation sites in budding yeast.

Nguyen Ba AN, Moses AM.

Mol Biol Evol. 2010 Sep;27(9):2027-37. doi: 10.1093/molbev/msq090. Epub 2010 Apr 5.

PMID:
20368267
[PubMed - indexed for MEDLINE]
Free Article
7.

NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction.

Nguyen Ba AN, Pogoutse A, Provart N, Moses AM.

BMC Bioinformatics. 2009 Jun 29;10:202. doi: 10.1186/1471-2105-10-202.

PMID:
19563654
[PubMed - indexed for MEDLINE]
Free PMC Article

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