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Results: 17

1.

The RNA-editing enzyme ADAR1 controls innate immune responses to RNA.

Mannion NM, Greenwood SM, Young R, Cox S, Brindle J, Read D, Nellåker C, Vesely C, Ponting CP, McLaughlin PJ, Jantsch MF, Dorin J, Adams IR, Scadden AD, Ohman M, Keegan LP, O'Connell MA.

Cell Rep. 2014 Nov 20;9(4):1482-94. doi: 10.1016/j.celrep.2014.10.041. Epub 2014 Nov 13.

2.

Genetic heterogeneity in Cornelia de Lange syndrome (CdLS) and CdLS-like phenotypes with observed and predicted levels of mosaicism.

Ansari M, Poke G, Ferry Q, Williamson K, Aldridge R, Meynert AM, Bengani H, Chan CY, Kayserili H, Avci S, Hennekam RC, Lampe AK, Redeker E, Homfray T, Ross A, Falkenberg Smeland M, Mansour S, Parker MJ, Cook JA, Splitt M, Fisher RB, Fryer A, Magee AC, Wilkie A, Barnicoat A, Brady AF, Cooper NS, Mercer C, Deshpande C, Bennett CP, Pilz DT, Ruddy D, Cilliers D, Johnson DS, Josifova D, Rosser E, Thompson EM, Wakeling E, Kinning E, Stewart F, Flinter F, Girisha KM, Cox H, Firth HV, Kingston H, Wee JS, Hurst JA, Clayton-Smith J, Tolmie J, Vogt J, Tatton-Brown K, Chandler K, Prescott K, Wilson L, Behnam M, McEntagart M, Davidson R, Lynch SA, Sisodiya S, Mehta SG, McKee SA, Mohammed S, Holden S, Park SM, Holder SE, Harrison V, McConnell V, Lam WK, Green AJ, Donnai D, Bitner-Glindzicz M, Donnelly DE, Nellåker C, Taylor MS, FitzPatrick DR.

J Med Genet. 2014 Oct;51(10):659-68. doi: 10.1136/jmedgenet-2014-102573. Epub 2014 Aug 14.

3.

Diagnostically relevant facial gestalt information from ordinary photos.

Ferry Q, Steinberg J, Webber C, FitzPatrick DR, Ponting CP, Zisserman A, Nellåker C.

Elife. 2014 Jun 24;3:e02020. doi: 10.7554/eLife.02020.

4.

Transcriptional derepression of the ERVWE1 locus following influenza A virus infection.

Li F, Nellåker C, Sabunciyan S, Yolken RH, Jones-Brando L, Johansson AS, Owe-Larsson B, Karlsson H.

J Virol. 2014 Apr;88(8):4328-37. doi: 10.1128/JVI.03628-13. Epub 2014 Jan 29.

5.

The genomic landscape shaped by selection on transposable elements across 18 mouse strains.

Nellåker C, Keane TM, Yalcin B, Wong K, Agam A, Belgard TG, Flint J, Adams DJ, Frankel WN, Ponting CP.

Genome Biol. 2012 Jun 15;13(6):R45. doi: 10.1186/gb-2012-13-6-r45.

6.

High levels of RNA-editing site conservation amongst 15 laboratory mouse strains.

Danecek P, Nellåker C, McIntyre RE, Buendia-Buendia JE, Bumpstead S, Ponting CP, Flint J, Durbin R, Keane TM, Adams DJ.

Genome Biol. 2012 Apr 23;13(4):26. doi: 10.1186/gb-2012-13-4-r26.

7.

Sequence-based characterization of structural variation in the mouse genome.

Yalcin B, Wong K, Agam A, Goodson M, Keane TM, Gan X, Nellåker C, Goodstadt L, Nicod J, Bhomra A, Hernandez-Pliego P, Whitley H, Cleak J, Dutton R, Janowitz D, Mott R, Adams DJ, Flint J.

Nature. 2011 Sep 14;477(7364):326-9. doi: 10.1038/nature10432.

8.

Mouse genomic variation and its effect on phenotypes and gene regulation.

Keane TM, Goodstadt L, Danecek P, White MA, Wong K, Yalcin B, Heger A, Agam A, Slater G, Goodson M, Furlotte NA, Eskin E, Nellåker C, Whitley H, Cleak J, Janowitz D, Hernandez-Pliego P, Edwards A, Belgard TG, Oliver PL, McIntyre RE, Bhomra A, Nicod J, Gan X, Yuan W, van der Weyden L, Steward CA, Bala S, Stalker J, Mott R, Durbin R, Jackson IJ, Czechanski A, Guerra-Assunção JA, Donahue LR, Reinholdt LG, Payseur BA, Ponting CP, Birney E, Flint J, Adams DJ.

Nature. 2011 Sep 14;477(7364):289-94. doi: 10.1038/nature10413.

9.

Rapid turnover of functional sequence in human and other genomes.

Ponting CP, Nellåker C, Meader S.

Annu Rev Genomics Hum Genet. 2011;12:275-99. doi: 10.1146/annurev-genom-090810-183115. Review.

PMID:
21721940
10.

A systematic evaluation of expression of HERV-W elements; influence of genomic context, viral structure and orientation.

Li F, Nellåker C, Yolken RH, Karlsson H.

BMC Genomics. 2011 Jan 12;12:22. doi: 10.1186/1471-2164-12-22.

11.

Expression profiling of repetitive elements by melting temperature analysis: variation in HERV-W gag expression across human individuals and tissues.

Nellåker C, Li F, Uhrzander F, Tyrcha J, Karlsson H.

BMC Genomics. 2009 Nov 17;10:532. doi: 10.1186/1471-2164-10-532.

12.

Mixture models for analysis of melting temperature data.

Nellåker C, Uhrzander F, Tyrcha J, Karlsson H.

BMC Bioinformatics. 2008 Sep 11;9:370. doi: 10.1186/1471-2105-9-370.

13.

Elevated levels of human endogenous retrovirus-W transcripts in blood cells from patients with first episode schizophrenia.

Yao Y, Schröder J, Nellåker C, Bottmer C, Bachmann S, Yolken RH, Karlsson H.

Genes Brain Behav. 2008 Feb;7(1):103-12. Epub 2007 Jun 7.

PMID:
17559415
14.
15.
16.

Transactivation of elements in the human endogenous retrovirus W family by viral infection.

Nellåker C, Yao Y, Jones-Brando L, Mallet F, Yolken RH, Karlsson H.

Retrovirology. 2006 Jul 6;3:44.

17.

Evaluation of minor groove binding probe and Taqman probe PCR assays: Influence of mismatches and template complexity on quantification.

Yao Y, Nellåker C, Karlsson H.

Mol Cell Probes. 2006 Oct;20(5):311-6. Epub 2006 Apr 21.

PMID:
16704921
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