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Results: 1 to 20 of 217


Intravital fluorescence imaging of mouse brain using implantable semiconductor devices and epi-illumination of biological tissue.

Takehara H, Ohta Y, Motoyama M, Haruta M, Nagasaki M, Takehara H, Noda T, Sasagawa K, Tokuda T, Ohta J.

Biomed Opt Express. 2015 Apr 2;6(5):1553-64. doi: 10.1364/BOE.6.001553. eCollection 2015 May 1.


Inter-Individual Differences in the Oral Bacteriome Are Greater than Intra-Day Fluctuations in Individuals.

Sato Y, Yamagishi J, Yamashita R, Shinozaki N, Ye B, Yamada T, Yamamoto M, Nagasaki M, Tsuboi A.

PLoS One. 2015 Jun 29;10(6):e0131607. doi: 10.1371/journal.pone.0131607. eCollection 2015.


Japonica array: improved genotype imputation by designing a population-specific SNP array with 1070 Japanese individuals.

Kawai Y, Mimori T, Kojima K, Nariai N, Danjoh I, Saito R, Yasuda J, Yamamoto M, Nagasaki M.

J Hum Genet. 2015 Jun 25. doi: 10.1038/jhg.2015.68. [Epub ahead of print]


Identification of Ganglioside GM3 Molecular Species in Human Serum Associated with Risk Factors of Metabolic Syndrome.

Veillon L, Go S, Matsuyama W, Suzuki A, Nagasaki M, Yatomi Y, Inokuchi J.

PLoS One. 2015 Jun 23;10(6):e0129645. doi: 10.1371/journal.pone.0129645. eCollection 2015.


Somatic alteration and depleted nuclear expression of BAP1 in human esophageal squamous cell carcinoma.

Mori T, Sumii M, Fujishima F, Ueno K, Emi M, Nagasaki M, Ishioka C, Chiba N.

Cancer Sci. 2015 Jun 17. doi: 10.1111/cas.12722. [Epub ahead of print]


IL-1α induces thrombopoiesis through megakaryocyte rupture in response to acute platelet needs.

Nishimura S, Nagasaki M, Kunishima S, Sawaguchi A, Sakata A, Sakaguchi H, Ohmori T, Manabe I, Italiano JE Jr, Ryu T, Takayama N, Komuro I, Kadowaki T, Eto K, Nagai R.

J Cell Biol. 2015 May 11;209(3):453-66. doi: 10.1083/jcb.201410052.


HLA-VBSeq: accurate HLA typing at full resolution from whole-genome sequencing data.

Nariai N, Kojima K, Saito S, Mimori T, Sato Y, Kawai Y, Yamaguchi-Kabata Y, Yasuda J, Nagasaki M.

BMC Genomics. 2015;16 Suppl 2:S7. doi: 10.1186/1471-2164-16-S2-S7. Epub 2015 Jan 21.


Estimating copy numbers of alleles from population-scale high-throughput sequencing data.

Mimori T, Nariai N, Kojima K, Sato Y, Kawai Y, Yamaguchi-Kabata Y, Nagasaki M.

BMC Bioinformatics. 2015;16 Suppl 1:S4. doi: 10.1186/1471-2105-16-S1-S4. Epub 2015 Jan 21.


TIGAR2: sensitive and accurate estimation of transcript isoform expression with longer RNA-Seq reads.

Nariai N, Kojima K, Mimori T, Sato Y, Kawai Y, Yamaguchi-Kabata Y, Nagasaki M.

BMC Genomics. 2014;15 Suppl 10:S5. doi: 10.1186/1471-2164-15-S10-S5. Epub 2014 Dec 12.


Repeated high intensity bouts with long recovery: are bicarbonate or carbohydrate supplements an option?

Stöggl T, Torres-Peralta R, Cetin E, Nagasaki M.

ScientificWorldJournal. 2014;2014:145747. doi: 10.1155/2014/145747. Epub 2014 Nov 10.


An efficient quantitation method of next-generation sequencing libraries by using MiSeq sequencer.

Katsuoka F, Yokozawa J, Tsuda K, Ito S, Pan X, Nagasaki M, Yasuda J, Yamamoto M.

Anal Biochem. 2014 Dec 1;466:27-9. doi: 10.1016/j.ab.2014.08.015. Epub 2014 Aug 28.


Revisiting the bromination of C-H bonds with molecular bromine by using a photo-microflow system.

Manabe Y, Kitawaki Y, Nagasaki M, Fukase K, Matsubara H, Hino Y, Fukuyama T, Ryu I.

Chemistry. 2014 Sep 26;20(40):12750-3. doi: 10.1002/chem.201402303. Epub 2014 Aug 29.


Inference of gene regulatory networks incorporating multi-source biological knowledge via a state space model with L1 regularization.

Hasegawa T, Yamaguchi R, Nagasaki M, Miyano S, Imoto S.

PLoS One. 2014 Aug 27;9(8):e105942. doi: 10.1371/journal.pone.0105942. eCollection 2014.


Validation of multiple single nucleotide variation calls by additional exome analysis with a semiconductor sequencer to supplement data of whole-genome sequencing of a human population.

Motoike IN, Matsumoto M, Danjoh I, Katsuoka F, Kojima K, Nariai N, Sato Y, Yamaguchi-Kabata Y, Ito S, Kudo H, Nishijima I, Nishikawa S, Pan X, Saito R, Saito S, Saito T, Shirota M, Tsuda K, Yokozawa J, Igarashi K, Minegishi N, Tanabe O, Fuse N, Nagasaki M, Kinoshita K, Yasuda J, Yamamoto M.

BMC Genomics. 2014 Aug 10;15:673. doi: 10.1186/1471-2164-15-673.


SUGAR: graphical user interface-based data refiner for high-throughput DNA sequencing.

Sato Y, Kojima K, Nariai N, Yamaguchi-Kabata Y, Kawai Y, Takahashi M, Mimori T, Nagasaki M.

BMC Genomics. 2014 Aug 8;15:664. doi: 10.1186/1471-2164-15-664.


Clinical development and trial design of biosimilar products: a Japanese perspective.

Nagasaki M, Ando Y.

J Biopharm Stat. 2014;24(6):1165-72. doi: 10.1080/10543406.2014.941983.


ENPP2 contributes to adipose tissue expansion and insulin resistance in diet-induced obesity.

Nishimura S, Nagasaki M, Okudaira S, Aoki J, Ohmori T, Ohkawa R, Nakamura K, Igarashi K, Yamashita H, Eto K, Uno K, Hayashi N, Kadowaki T, Komuro I, Yatomi Y, Nagai R.

Diabetes. 2014 Dec;63(12):4154-64. doi: 10.2337/db13-1694. Epub 2014 Jun 26.


An efficient method of exploring simulation models by assimilating literature and biological observational data.

Hasegawa T, Nagasaki M, Yamaguchi R, Imoto S, Miyano S.

Biosystems. 2014 Jul;121:54-66. doi: 10.1016/j.biosystems.2014.06.001. Epub 2014 Jun 5.


CSML2SBML: a novel tool for converting quantitative biological pathway models from CSML into SBML.

Li C, Nagasaki M, Ikeda E, Sekiya Y, Miyano S.

Biosystems. 2014 Jul;121:22-8. doi: 10.1016/j.biosystems.2014.05.004. Epub 2014 Jun 2.


Identification of acquired mutations by whole-genome sequencing in GATA-2 deficiency evolving into myelodysplasia and acute leukemia.

Fujiwara T, Fukuhara N, Funayama R, Nariai N, Kamata M, Nagashima T, Kojima K, Onishi Y, Sasahara Y, Ishizawa K, Nagasaki M, Nakayama K, Harigae H.

Ann Hematol. 2014 Sep;93(9):1515-22. doi: 10.1007/s00277-014-2090-4. Epub 2014 Apr 30.

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