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Items: 8


Synthetic biology and regulatory networks: where metabolic systems biology meets control engineering.

He F, Murabito E, Westerhoff HV.

J R Soc Interface. 2016 Apr;13(117). pii: 20151046. doi: 10.1098/rsif.2015.1046. Epub 2016 Apr 13. Review.


Monte-Carlo modeling of the central carbon metabolism of Lactococcus lactis: insights into metabolic regulation.

Murabito E, Verma M, Bekker M, Bellomo D, Westerhoff HV, Teusink B, Steuer R.

PLoS One. 2014 Sep 30;9(9):e106453. doi: 10.1371/journal.pone.0106453. eCollection 2014. Erratum in: PLoS One. 2014;9(10):e112204. PLoS One. 2014;9(12):e116129.


A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes.

Smallbone K, Messiha HL, Carroll KM, Winder CL, Malys N, Dunn WB, Murabito E, Swainston N, Dada JO, Khan F, Pir P, Simeonidis E, Spasić I, Wishart J, Weichart D, Hayes NW, Jameson D, Broomhead DS, Oliver SG, Gaskell SJ, McCarthy JE, Paton NW, Westerhoff HV, Kell DB, Mendes P.

FEBS Lett. 2013 Sep 2;587(17):2832-41. doi: 10.1016/j.febslet.2013.06.043. Epub 2013 Jul 4.


Improving metabolic flux predictions using absolute gene expression data.

Lee D, Smallbone K, Dunn WB, Murabito E, Winder CL, Kell DB, Mendes P, Swainston N.

BMC Syst Biol. 2012 Jun 19;6:73. doi: 10.1186/1752-0509-6-73.


A probabilistic approach to identify putative drug targets in biochemical networks.

Murabito E, Smallbone K, Swinton J, Westerhoff HV, Steuer R.

J R Soc Interface. 2011 Jun 6;8(59):880-95. doi: 10.1098/rsif.2010.0540. Epub 2010 Dec 1.


Why does yeast ferment? A flux balance analysis study.

Simeonidis E, Murabito E, Smallbone K, Westerhoff HV.

Biochem Soc Trans. 2010 Oct;38(5):1225-9. doi: 10.1042/BST0381225.


Capturing the essence of a metabolic network: a flux balance analysis approach.

Murabito E, Simeonidis E, Smallbone K, Swinton J.

J Theor Biol. 2009 Oct 7;260(3):445-52. doi: 10.1016/j.jtbi.2009.06.013. Epub 2009 Jun 21.


Vertical systems biology: from DNA to flux and back.

Bevilacqua A, Wilkinson SJ, Dimelow R, Murabito E, Rehman S, Nardelli M, van Eunen K, Rossell S, Bruggeman FJ, Blüthgen N, De Vos D, Bouwman J, Bakker BM, Westerhoff HV.

SEB Exp Biol Ser. 2008;61:65-91. No abstract available.

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