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Characterizing seamless ligation cloning extract for synthetic biological applications.

Messerschmidt K, Hochrein L, Dehm D, Schulz K, Mueller-Roeber B.

Anal Biochem. 2016 Jun 14;509:24-32. doi: 10.1016/j.ab.2016.05.029. [Epub ahead of print]


Gene regulatory network inference using fused LASSO on multiple data sets.

Omranian N, Eloundou-Mbebi JM, Mueller-Roeber B, Nikoloski Z.

Sci Rep. 2016 Feb 11;6:20533. doi: 10.1038/srep20533.


The Arabidopsis Transcription Factor MYB112 Promotes Anthocyanin Formation during Salinity and under High Light Stress.

Lotkowska ME, Tohge T, Fernie AR, Xue GP, Balazadeh S, Mueller-Roeber B.

Plant Physiol. 2015 Nov;169(3):1862-80. doi: 10.1104/pp.15.00605. Epub 2015 Sep 16.


Priming and memory of stress responses in organisms lacking a nervous system.

Hilker M, Schwachtje J, Baier M, Balazadeh S, Bäurle I, Geiselhardt S, Hincha DK, Kunze R, Mueller-Roeber B, Rillig MC, Rolff J, Romeis T, Schmülling T, Steppuhn A, van Dongen J, Whitcomb SJ, Wurst S, Zuther E, Kopka J.

Biol Rev Camb Philos Soc. 2015 Aug 20. doi: 10.1111/brv.12215. [Epub ahead of print]


GLYCOLATE OXIDASE3, a Glycolate Oxidase Homolog of Yeast l-Lactate Cytochrome c Oxidoreductase, Supports l-Lactate Oxidation in Roots of Arabidopsis.

Engqvist MK, Schmitz J, Gertzmann A, Florian A, Jaspert N, Arif M, Balazadeh S, Mueller-Roeber B, Fernie AR, Maurino VG.

Plant Physiol. 2015 Oct;169(2):1042-61. doi: 10.1104/pp.15.01003. Epub 2015 Aug 5.


Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.

Wang T, Tohge T, Ivakov A, Mueller-Roeber B, Fernie AR, Mutwil M, Schippers JH, Persson S.

Plant Physiol. 2015 Oct;169(2):1027-41. doi: 10.1104/pp.15.00962. Epub 2015 Aug 4.


Transcription Factor Arabidopsis Activating Factor1 Integrates Carbon Starvation Responses with Trehalose Metabolism.

Garapati P, Feil R, Lunn JE, Van Dijck P, Balazadeh S, Mueller-Roeber B.

Plant Physiol. 2015 Sep;169(1):379-90. doi: 10.1104/pp.15.00917. Epub 2015 Jul 6.


Phytotoxicity of cobalt ions on the duckweed Lemna minor - Morphology, ion uptake, and starch accumulation.

Sree KS, Keresztes Á, Mueller-Roeber B, Brandt R, Eberius M, Fischer W, Appenroth KJ.

Chemosphere. 2015 Jul;131:149-56. doi: 10.1016/j.chemosphere.2015.03.008. Epub 2015 Mar 31.


Differential metabolic and coexpression networks of plant metabolism.

Omranian N, Kleessen S, Tohge T, Klie S, Basler G, Mueller-Roeber B, Fernie AR, Nikoloski Z.

Trends Plant Sci. 2015 May;20(5):266-8. doi: 10.1016/j.tplants.2015.02.002. Epub 2015 Mar 16.


Identification and mode of inheritance of quantitative trait loci for secondary metabolite abundance in tomato.

Alseekh S, Tohge T, Wendenberg R, Scossa F, Omranian N, Li J, Kleessen S, Giavalisco P, Pleban T, Mueller-Roeber B, Zamir D, Nikoloski Z, Fernie AR.

Plant Cell. 2015 Mar;27(3):485-512. doi: 10.1105/tpc.114.132266. Epub 2015 Mar 13.


Segmentation of biological multivariate time-series data.

Omranian N, Mueller-Roeber B, Nikoloski Z.

Sci Rep. 2015 Mar 11;5:8937. doi: 10.1038/srep08937.


ROS-mediated abiotic stress-induced programmed cell death in plants.

Petrov V, Hille J, Mueller-Roeber B, Gechev TS.

Front Plant Sci. 2015 Feb 18;6:69. doi: 10.3389/fpls.2015.00069. eCollection 2015. Review.


Transcriptomic analysis of nitrogen starvation- and cultivar-specific leaf senescence in winter oilseed rape (Brassica napus L.).

Koeslin-Findeklee F, Rizi VS, Becker MA, Parra-Londono S, Arif M, Balazadeh S, Mueller-Roeber B, Kunze R, Horst WJ.

Plant Sci. 2015 Apr;233:174-85. doi: 10.1016/j.plantsci.2014.11.018. Epub 2015 Jan 22.


Growth-Regulating Factors (GRFs): A Small Transcription Factor Family with Important Functions in Plant Biology.

Omidbakhshfard MA, Proost S, Fujikura U, Mueller-Roeber B.

Mol Plant. 2015 Jul;8(7):998-1010. doi: 10.1016/j.molp.2015.01.013. Epub 2015 Jan 22. Review.


PLAZA 3.0: an access point for plant comparative genomics.

Proost S, Van Bel M, Vaneechoutte D, Van de Peer Y, Inzé D, Mueller-Roeber B, Vandepoele K.

Nucleic Acids Res. 2015 Jan;43(Database issue):D974-81. doi: 10.1093/nar/gku986. Epub 2014 Oct 16.


Systems Analysis of the Response of Photosynthesis, Metabolism, and Growth to an Increase in Irradiance in the Photosynthetic Model Organism Chlamydomonas reinhardtii.

Mettler T, Mühlhaus T, Hemme D, Schöttler MA, Rupprecht J, Idoine A, Veyel D, Pal SK, Yaneva-Roder L, Winck FV, Sommer F, Vosloh D, Seiwert B, Erban A, Burgos A, Arvidsson S, Schönfelder S, Arnold A, Günther M, Krause U, Lohse M, Kopka J, Nikoloski Z, Mueller-Roeber B, Willmitzer L, Bock R, Schroda M, Stitt M.

Plant Cell. 2014 Jun 3;26(6):2310-2350. [Epub ahead of print]


Transcriptional control of ROS homeostasis by KUODA1 regulates cell expansion during leaf development.

Lu D, Wang T, Persson S, Mueller-Roeber B, Schippers JH.

Nat Commun. 2014 May 7;5:3767. doi: 10.1038/ncomms4767.


A cell type-specific view on the translation of mRNAs from ROS-responsive genes upon paraquat treatment of Arabidopsis thaliana leaves.

Benina M, Ribeiro DM, Gechev TS, Mueller-Roeber B, Schippers JH.

Plant Cell Environ. 2015 Feb;38(2):349-63. doi: 10.1111/pce.12355. Epub 2014 Jun 2.


Reversal of senescence by N resupply to N-starved Arabidopsis thaliana: transcriptomic and metabolomic consequences.

Balazadeh S, Schildhauer J, Araújo WL, Munné-Bosch S, Fernie AR, Proost S, Humbeck K, Mueller-Roeber B.

J Exp Bot. 2014 Jul;65(14):3975-92. doi: 10.1093/jxb/eru119. Epub 2014 Apr 1.


Natural products from resurrection plants: potential for medical applications.

Gechev TS, Hille J, Woerdenbag HJ, Benina M, Mehterov N, Toneva V, Fernie AR, Mueller-Roeber B.

Biotechnol Adv. 2014 Nov 1;32(6):1091-101. doi: 10.1016/j.biotechadv.2014.03.005. Epub 2014 Mar 26. Review.

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