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Results: 1 to 20 of 28

1.

Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: the VESSEL12 study.

Rudyanto RD, Kerkstra S, van Rikxoort EM, Fetita C, Brillet PY, Lefevre C, Xue W, Zhu X, Liang J, Öksüz I, Ünay D, Kadipaşaoğlu K, Estépar RS, Ross JC, Washko GR, Prieto JC, Hoyos MH, Orkisz M, Meine H, Hüllebrand M, Stöcker C, Mir FL, Naranjo V, Villanueva E, Staring M, Xiao C, Stoel BC, Fabijanska A, Smistad E, Elster AC, Lindseth F, Foruzan AH, Kiros R, Popuri K, Cobzas D, Jimenez-Carretero D, Santos A, Ledesma-Carbayo MJ, Helmberger M, Urschler M, Pienn M, Bosboom DG, Campo A, Prokop M, de Jong PA, Ortiz-de-Solorzano C, Muñoz-Barrutia A, van Ginneken B.

Med Image Anal. 2014 Oct;18(7):1217-32. doi: 10.1016/j.media.2014.07.003. Epub 2014 Jul 23.

PMID:
25113321
[PubMed - in process]
2.

Interactive lung segmentation in abnormal human and animal chest CT scans.

Kockelkorn TT, Schaefer-Prokop CM, Bozovic G, Muñoz-Barrutia A, van Rikxoort EM, Brown MS, de Jong PA, Viergever MA, van Ginneken B.

Med Phys. 2014 Aug;41(8):081915. doi: 10.1118/1.4890597.

PMID:
25086546
[PubMed - in process]
3.

Validation tool for traction force microscopy.

Jorge-Peñas A, Muñoz-Barrutia A, de-Juan-Pardo EM, Ortiz-de-Solorzano C.

Comput Methods Biomech Biomed Engin. 2015 Oct;18(13):1377-85. doi: 10.1080/10255842.2014.903934. Epub 2014 Apr 4.

PMID:
24697293
[PubMed - in process]
4.

A benchmark for comparison of cell tracking algorithms.

Maška M, Ulman V, Svoboda D, Matula P, Matula P, Ederra C, Urbiola A, España T, Venkatesan S, Balak DM, Karas P, Bolcková T, Streitová M, Carthel C, Coraluppi S, Harder N, Rohr K, Magnusson KE, Jaldén J, Blau HM, Dzyubachyk O, Křížek P, Hagen GM, Pastor-Escuredo D, Jimenez-Carretero D, Ledesma-Carbayo MJ, Muñoz-Barrutia A, Meijering E, Kozubek M, Ortiz-de-Solorzano C.

Bioinformatics. 2014 Jun 1;30(11):1609-17. doi: 10.1093/bioinformatics/btu080. Epub 2014 Feb 12.

PMID:
24526711
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

MODELING AIRWAY PROBABILITY.

Rudyanto RD, Muñoz-Barrutia A, Diaz AA, Ross J, Washko GR, Ortiz-de-Solorzano C, Estepar RS.

Proc IEEE Int Symp Biomed Imaging. 2013. doi: 10.1109/ISBI.2013.6556491.

PMID:
24280685
[PubMed]
Free PMC Article
6.

Efficient blind spectral unmixing of fluorescently labeled samples using multi-layer non-negative matrix factorization.

Pengo T, Muñoz-Barrutia A, Zudaire I, Ortiz-de-Solorzano C.

PLoS One. 2013 Nov 8;8(11):e78504. doi: 10.1371/journal.pone.0078504. eCollection 2013.

PMID:
24260120
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Individual nodule tracking in micro-CT images of a longitudinal lung cancer mouse model.

Rudyanto RD, Bastarrika G, de Biurrun G, Agorreta J, Montuenga LM, Ortiz-de-Solorzano C, Muñoz-Barrutia A.

Med Image Anal. 2013 Dec;17(8):1095-105. doi: 10.1016/j.media.2013.07.002. Epub 2013 Jul 19.

PMID:
23920346
[PubMed - indexed for MEDLINE]
8.

Smokers with CT detected emphysema and no airway obstruction have decreased plasma levels of EGF, IL-15, IL-8 and IL-1ra.

de-Torres JP, Blanco D, Alcaide AB, Seijo LM, Bastarrika G, Pajares MJ, Muñoz-Barrutia A, Ortiz-de-Solorzano C, Pio R, Campo A, Montes U, Segura V, Pueyo J, Montuenga LM, Zulueta JJ.

PLoS One. 2013;8(4):e60260. doi: 10.1371/journal.pone.0060260. Epub 2013 Apr 5.

PMID:
23577098
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Segmentation and shape tracking of whole fluorescent cells based on the Chan-Vese model.

Maška M, Daněk O, Garasa S, Rouzaut A, Muñoz-Barrutia A, Ortiz-de-Solorzano C.

IEEE Trans Med Imaging. 2013 Jun;32(6):995-1006. doi: 10.1109/TMI.2013.2243463. Epub 2013 Jan 29.

PMID:
23372077
[PubMed - indexed for MEDLINE]
10.

Multiscale in situ analysis of the role of dyskerin in lung cancer cells.

Fernandez-Garcia I, Marcos T, Muñoz-Barrutia A, Serrano D, Pio R, Montuenga LM, Ortiz-de-Solorzano C.

Integr Biol (Camb). 2013 Feb;5(2):402-13. doi: 10.1039/c2ib20219k.

PMID:
23233094
[PubMed - indexed for MEDLINE]
11.

Quantification of lung damage in an elastase-induced mouse model of emphysema.

Muñoz-Barrutia A, Ceresa M, Artaechevarria X, Montuenga LM, Ortiz-de-Solorzano C.

Int J Biomed Imaging. 2012;2012:734734. doi: 10.1155/2012/734734. Epub 2012 Nov 8.

PMID:
23197972
[PubMed]
Free PMC Article
12.

Numerical estimation of 3D mechanical forces exerted by cells on non-linear materials.

Palacio J, Jorge-Peñas A, Muñoz-Barrutia A, Ortiz-de-Solorzano C, de Juan-Pardo E, García-Aznar JM.

J Biomech. 2013 Jan 4;46(1):50-5. doi: 10.1016/j.jbiomech.2012.10.009. Epub 2012 Nov 7.

PMID:
23141954
[PubMed - indexed for MEDLINE]
13.

Adiposoft: automated software for the analysis of white adipose tissue cellularity in histological sections.

Galarraga M, Campión J, Muñoz-Barrutia A, Boqué N, Moreno H, Martínez JA, Milagro F, Ortiz-de-Solórzano C.

J Lipid Res. 2012 Dec;53(12):2791-6. doi: 10.1194/jlr.D023788. Epub 2012 Sep 19.

PMID:
22993232
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Wavelet-based detection of transcriptional activity on a novel Staphylococcus aureus tiling microarray.

Segura V, Toledo-Arana A, Uzqueda M, Lasa I, Muñoz-Barrutia A.

BMC Bioinformatics. 2012 Sep 5;13:222. doi: 10.1186/1471-2105-13-222.

PMID:
22950634
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

New strategies for echocardiographic evaluation of left ventricular function in a mouse model of long-term myocardial infarction.

Benavides-Vallve C, Corbacho D, Iglesias-Garcia O, Pelacho B, Albiasu E, Castaño S, Muñoz-Barrutia A, Prosper F, Ortiz-de-Solorzano C.

PLoS One. 2012;7(7):e41691. doi: 10.1371/journal.pone.0041691. Epub 2012 Jul 27.

PMID:
22848568
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Robust, standardized quantification of pulmonary emphysema in low dose CT exams.

Ceresa M, Bastarrika G, de Torres JP, Montuenga LM, Zulueta JJ, Ortiz-de-Solorzano C, Muñoz-Barrutia A.

Acad Radiol. 2011 Nov;18(11):1382-90. doi: 10.1016/j.acra.2011.06.015.

PMID:
21852160
[PubMed - indexed for MEDLINE]
17.

Evaluation of micro-CT for emphysema assessment in mice: comparison with non-radiological techniques.

Artaechevarria X, Blanco D, de Biurrun G, Ceresa M, Pérez-Martín D, Bastarrika G, de Torres JP, Zulueta JJ, Montuenga LM, Ortiz-de-Solorzano C, Munoz-Barrutia A.

Eur Radiol. 2011 May;21(5):954-62. doi: 10.1007/s00330-010-1982-5. Epub 2010 Oct 18.

PMID:
20953986
[PubMed - indexed for MEDLINE]
18.

Non-rigid consistent registration of 2D image sequences.

Arganda-Carreras I, Sorzano CO, Thévenaz P, Muñoz-Barrutia A, Kybic J, Marabini R, Carazo JM, Ortiz-de Solorzano C.

Phys Med Biol. 2010 Oct 21;55(20):6215-42. doi: 10.1088/0031-9155/55/20/012. Epub 2010 Sep 30.

PMID:
20885021
[PubMed - indexed for MEDLINE]
19.

Longitudinal study of a mouse model of chronic pulmonary inflammation using breath hold gated micro-CT.

Artaechevarria X, Blanco D, Pérez-Martín D, de Biurrun G, Montuenga LM, de Torres JP, Zulueta JJ, Bastarrika G, Muñoz-Barrutia A, Ortiz-de-Solorzano C.

Eur Radiol. 2010 Nov;20(11):2600-8. doi: 10.1007/s00330-010-1853-0. Epub 2010 Jun 24.

PMID:
20574632
[PubMed - indexed for MEDLINE]
20.

Fast space-variant elliptical filtering using box splines.

Chaudhury KN, Munoz-Barrutia A, Unser M.

IEEE Trans Image Process. 2010 Sep;19(9):2290-306. doi: 10.1109/TIP.2010.2046953. Epub 2010 Mar 29.

PMID:
20350851
[PubMed - indexed for MEDLINE]

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