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Results: 1 to 20 of 113

1.

The Cytoscape app article collection.

Pico AR, Bader GD, Demchak B, Guitart Pla O, Hull T, Longabaugh W, Lopes C, Lotia S, Molenaar P, Montojo J, Morris JH, Ono K, Schwikowski B, Welker D, Ideker T.

F1000Res. 2014 Jul 1;3:138. doi: 10.12688/f1000research.4642.1. eCollection 2014.

PMID:
25580224
[PubMed]
Free PMC Article
2.

What is orthopaedic triage? A systematic review.

Morris JH, James RE, Davey R, Waddington G.

J Eval Clin Pract. 2014 Nov 20. doi: 10.1111/jep.12260. [Epub ahead of print]

PMID:
25410703
[PubMed - as supplied by publisher]
3.

setsApp: Set operations for Cytoscape Nodes and Edges.

Morris JH, Wu A, Doncheva NT, Albrecht M, Ferrin TE.

F1000Res. 2014 Jul 1;3:149. doi: 10.12688/f1000research.4392.1. eCollection 2014.

PMID:
25352980
[PubMed]
Free PMC Article
4.

enhancedGraphics: a Cytoscape app for enhanced node graphics.

Morris JH, Kuchinsky A, Ferrin TE, Pico AR.

F1000Res. 2014 Jul 1;3:147. doi: 10.12688/f1000research.4460.1. eCollection 2014.

PMID:
25285206
[PubMed]
Free PMC Article
5.

Affinity purification-mass spectrometry and network analysis to understand protein-protein interactions.

Morris JH, Knudsen GM, Verschueren E, Johnson JR, Cimermancic P, Greninger AL, Pico AR.

Nat Protoc. 2014 Nov;9(11):2539-54. doi: 10.1038/nprot.2014.164. Epub 2014 Oct 2.

PMID:
25275790
[PubMed - in process]
6.
7.

Integrative visual analysis of protein sequence mutations.

Doncheva NT, Klein K, Morris JH, Wybrow M, Domingues FS, Albrecht M.

BMC Proc. 2014 Aug 28;8(Suppl 2 Proceedings of the 3rd Annual Symposium on Biologica):S2. doi: 10.1186/1753-6561-8-S2-S2. eCollection 2014.

PMID:
25237389
[PubMed]
Free PMC Article
8.

cddApp: a Cytoscape app for accessing the NCBI conserved domain database.

Morris JH, Wu A, Yamashita RA, Marchler-Bauer A, Ferrin TE.

Bioinformatics. 2015 Jan 1;31(1):134-6. doi: 10.1093/bioinformatics/btu605. Epub 2014 Sep 10.

PMID:
25212755
[PubMed - in process]
9.

Biological network exploration with cytoscape 3.

Su G, Morris JH, Demchak B, Bader GD.

Curr Protoc Bioinformatics. 2014 Sep 8;47:8.13.1-8.13.24. doi: 10.1002/0471250953.bi0813s47.

PMID:
25199793
[PubMed - in process]
10.

Enhancing UCSF Chimera through web services.

Huang CC, Meng EC, Morris JH, Pettersen EF, Ferrin TE.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W478-84. doi: 10.1093/nar/gku377. Epub 2014 May 26.

PMID:
24861624
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

From physical and functional to continuity with pre-stroke self and participation in valued activities: A qualitative exploration of stroke survivors', carers' and physiotherapists' perceptions of physical activity after stroke.

Morris JH, Oliver T, Kroll T, Joice S, Williams B.

Disabil Rehabil. 2015;37(1):64-77. doi: 10.3109/09638288.2014.907828. Epub 2014 Apr 3.

PMID:
24694303
[PubMed - in process]
12.

Interventions to promote long-term participation in physical activity after stroke: a systematic review of the literature.

Morris JH, Macgillivray S, McFarlane S.

Arch Phys Med Rehabil. 2014 May;95(5):956-67. doi: 10.1016/j.apmr.2013.12.016. Epub 2014 Jan 1. Review.

PMID:
24389402
[PubMed - indexed for MEDLINE]
13.

The Structure-Function Linkage Database.

Akiva E, Brown S, Almonacid DE, Barber AE 2nd, Custer AF, Hicks MA, Huang CC, Lauck F, Mashiyama ST, Meng EC, Mischel D, Morris JH, Ojha S, Schnoes AM, Stryke D, Yunes JM, Ferrin TE, Holliday GL, Babbitt PC.

Nucleic Acids Res. 2014 Jan;42(Database issue):D521-30. doi: 10.1093/nar/gkt1130. Epub 2013 Nov 23.

PMID:
24271399
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

From structure to systems: high-resolution, quantitative genetic analysis of RNA polymerase II.

Braberg H, Jin H, Moehle EA, Chan YA, Wang S, Shales M, Benschop JJ, Morris JH, Qiu C, Hu F, Tang LK, Fraser JS, Holstege FC, Hieter P, Guthrie C, Kaplan CD, Krogan NJ.

Cell. 2013 Aug 15;154(4):775-88. doi: 10.1016/j.cell.2013.07.033. Epub 2013 Aug 8.

PMID:
23932120
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Non-medical prescribing by physiotherapists: issues reported in the current evidence.

Morris JH, Grimmer K.

Man Ther. 2014 Feb;19(1):82-6. doi: 10.1016/j.math.2013.04.003. Epub 2013 May 10.

PMID:
23669436
[PubMed - in process]
16.

Predicting health related quality of life 6 months after stroke: the role of anxiety and upper limb dysfunction.

Morris JH, van Wijck F, Joice S, Donaghy M.

Disabil Rehabil. 2013 Feb;35(4):291-9. doi: 10.3109/09638288.2012.691942. Epub 2012 Jun 12.

PMID:
22691224
[PubMed - indexed for MEDLINE]
17.

Responses of the less affected arm to bilateral upper limb task training in early rehabilitation after stroke: a randomized controlled trial.

Morris JH, Van Wijck F.

Arch Phys Med Rehabil. 2012 Jul;93(7):1129-37. doi: 10.1016/j.apmr.2012.02.025. Epub 2012 Mar 12.

PMID:
22421627
[PubMed - indexed for MEDLINE]
18.

Global landscape of HIV-human protein complexes.

J├Ąger S, Cimermancic P, Gulbahce N, Johnson JR, McGovern KE, Clarke SC, Shales M, Mercenne G, Pache L, Li K, Hernandez H, Jang GM, Roth SL, Akiva E, Marlett J, Stephens M, D'Orso I, Fernandes J, Fahey M, Mahon C, O'Donoghue AJ, Todorovic A, Morris JH, Maltby DA, Alber T, Cagney G, Bushman FD, Young JA, Chanda SK, Sundquist WI, Kortemme T, Hernandez RD, Craik CS, Burlingame A, Sali A, Frankel AD, Krogan NJ.

Nature. 2011 Dec 21;481(7381):365-70. doi: 10.1038/nature10719.

PMID:
22190034
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

clusterMaker: a multi-algorithm clustering plugin for Cytoscape.

Morris JH, Apeltsin L, Newman AM, Baumbach J, Wittkop T, Su G, Bader GD, Ferrin TE.

BMC Bioinformatics. 2011 Nov 9;12:436. doi: 10.1186/1471-2105-12-436.

PMID:
22070249
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

GLay: community structure analysis of biological networks.

Su G, Kuchinsky A, Morris JH, States DJ, Meng F.

Bioinformatics. 2010 Dec 15;26(24):3135-7. doi: 10.1093/bioinformatics/btq596.

PMID:
21123224
[PubMed - indexed for MEDLINE]
Free PMC Article

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