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Items: 1 to 20 of 118

1.

VUV action spectroscopy of protonated leucine-enkephalin peptide in the 6-14 eV range.

Ranković MLj, Canon F, Nahon L, Giuliani A, Milosavljević AR.

J Chem Phys. 2015 Dec 28;143(24):244311. doi: 10.1063/1.4939080.

PMID:
26723675
2.

Using DNA Origami Nanostructures To Determine Absolute Cross Sections for UV Photon-Induced DNA Strand Breakage.

Vogel S, Rackwitz J, Schürman R, Prinz J, Milosavljević AR, Réfrégiers M, Giuliani A, Bald I.

J Phys Chem Lett. 2015 Nov 19;6(22):4589-93. doi: 10.1021/acs.jpclett.5b02238. Epub 2015 Nov 6.

PMID:
26536162
3.

Providing Access to Genomic Variant Knowledge in a Healthcare Setting: A Vision for the ClinGen Electronic Health Records Workgroup.

Overby CL, Heale B, Aronson S, Cherry JM, Dwight S, Milosavljevic A, Nelson T, Niehaus A, Weaver MA, Ramos EM, Williams MS.

Clin Pharmacol Ther. 2016 Feb;99(2):157-60. doi: 10.1002/cpt.270. Epub 2015 Nov 9.

PMID:
26418054
4.

Tryptophan-functionalized gold nanoparticles for deep UV imaging of microbial cells.

Pajović JD, Dojčilović R, Božanić DK, Kaščáková S, Réfrégiers M, Dimitrijević-Branković S, Vodnik VV, Milosavljević AR, Piscopiello E, Luyt AS, Djoković V.

Colloids Surf B Biointerfaces. 2015 Nov 1;135:742-50. doi: 10.1016/j.colsurfb.2015.08.050. Epub 2015 Aug 28.

PMID:
26340364
5.

Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies.

Subramanian SL, Kitchen RR, Alexander R, Carter BS, Cheung KH, Laurent LC, Pico A, Roberts LR, Roth ME, Rozowsky JS, Su AI, Gerstein MB, Milosavljevic A.

J Extracell Vesicles. 2015 Aug 28;4:27497. doi: 10.3402/jev.v4.27497. eCollection 2015.

6.

Recurrent BCAM-AKT2 fusion gene leads to a constitutively activated AKT2 fusion kinase in high-grade serous ovarian carcinoma.

Kannan K, Coarfa C, Chao PW, Luo L, Wang Y, Brinegar AE, Hawkins SM, Milosavljevic A, Matzuk MM, Yen L.

Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):E1272-7. doi: 10.1073/pnas.1501735112. Epub 2015 Mar 2.

7.

Integrative analysis of 111 reference human epigenomes.

Roadmap Epigenomics Consortium, Kundaje A, Meuleman W, Ernst J, Bilenky M, Yen A, Heravi-Moussavi A, Kheradpour P, Zhang Z, Wang J, Ziller MJ, Amin V, Whitaker JW, Schultz MD, Ward LD, Sarkar A, Quon G, Sandstrom RS, Eaton ML, Wu YC, Pfenning AR, Wang X, Claussnitzer M, Liu Y, Coarfa C, Harris RA, Shoresh N, Epstein CB, Gjoneska E, Leung D, Xie W, Hawkins RD, Lister R, Hong C, Gascard P, Mungall AJ, Moore R, Chuah E, Tam A, Canfield TK, Hansen RS, Kaul R, Sabo PJ, Bansal MS, Carles A, Dixon JR, Farh KH, Feizi S, Karlic R, Kim AR, Kulkarni A, Li D, Lowdon R, Elliott G, Mercer TR, Neph SJ, Onuchic V, Polak P, Rajagopal N, Ray P, Sallari RC, Siebenthall KT, Sinnott-Armstrong NA, Stevens M, Thurman RE, Wu J, Zhang B, Zhou X, Beaudet AE, Boyer LA, De Jager PL, Farnham PJ, Fisher SJ, Haussler D, Jones SJ, Li W, Marra MA, McManus MT, Sunyaev S, Thomson JA, Tlsty TD, Tsai LH, Wang W, Waterland RA, Zhang MQ, Chadwick LH, Bernstein BE, Costello JF, Ecker JR, Hirst M, Meissner A, Milosavljevic A, Ren B, Stamatoyannopoulos JA, Wang T, Kellis M.

Nature. 2015 Feb 19;518(7539):317-30. doi: 10.1038/nature14248.

8.

Epigenomic footprints across 111 reference epigenomes reveal tissue-specific epigenetic regulation of lincRNAs.

Amin V, Harris RA, Onuchic V, Jackson AR, Charnecki T, Paithankar S, Lakshmi Subramanian S, Riehle K, Coarfa C, Milosavljevic A.

Nat Commun. 2015 Feb 18;6:6370. doi: 10.1038/ncomms7370.

9.

Intermediate DNA methylation is a conserved signature of genome regulation.

Elliott G, Hong C, Xing X, Zhou X, Li D, Coarfa C, Bell RJ, Maire CL, Ligon KL, Sigaroudinia M, Gascard P, Tlsty TD, Harris RA, Schalkwyk LC, Bilenky M, Mill J, Farnham PJ, Kellis M, Marra MA, Milosavljevic A, Hirst M, Stormo GD, Wang T, Costello JF.

Nat Commun. 2015 Feb 18;6:6363. doi: 10.1038/ncomms7363.

10.

Action spectroscopy of a protonated peptide in the ultraviolet range.

Canon F, Milosavljević AR, Nahon L, Giuliani A.

Phys Chem Chem Phys. 2015 Oct 21;17(39):25725-33. doi: 10.1039/c4cp04762a.

PMID:
25586594
11.

Analysis of interactions between the epigenome and structural mutability of the genome using Genboree Workbench tools.

Coarfa C, Pichot C, Jackson A, Tandon A, Amin V, Raghuraman S, Paithankar S, Lee AV, McGuire SE, Milosavljevic A.

BMC Bioinformatics. 2014;15 Suppl 7:S2. doi: 10.1186/1471-2105-15-S7-S2. Epub 2014 May 28.

12.

Energy-Dependent UV Photodissociation of Gas-Phase Adenosine Monophosphate Nucleotide Ions: The Role of a Single Solvent Molecule.

Milosavljević AR, Cerovski VZ, Canon F, Ranković MLj, Škoro N, Nahon L, Giuliani A.

J Phys Chem Lett. 2014 Jun 5;5(11):1994-9. doi: 10.1021/jz500696b. Epub 2014 May 23.

PMID:
26273885
13.

mtDNA haplogroup and single nucleotide polymorphisms structure human microbiome communities.

Ma J, Coarfa C, Qin X, Bonnen PE, Milosavljevic A, Versalovic J, Aagaard K.

BMC Genomics. 2014 Apr 3;15:257. doi: 10.1186/1471-2164-15-257.

14.

CDKN2D-WDFY2 is a cancer-specific fusion gene recurrent in high-grade serous ovarian carcinoma.

Kannan K, Coarfa C, Rajapakshe K, Hawkins SM, Matzuk MM, Milosavljevic A, Yen L.

PLoS Genet. 2014 Mar 27;10(3):e1004216. doi: 10.1371/journal.pgen.1004216. eCollection 2014 Mar.

15.

Comparison and quantitative verification of mapping algorithms for whole-genome bisulfite sequencing.

Kunde-Ramamoorthy G, Coarfa C, Laritsky E, Kessler NJ, Harris RA, Xu M, Chen R, Shen L, Milosavljevic A, Waterland RA.

Nucleic Acids Res. 2014 Apr;42(6):e43. doi: 10.1093/nar/gkt1325. Epub 2014 Jan 3.

16.

Contribution of synchrotron radiation to photoactivation studies of biomolecular ions in the gas phase.

Giuliani A, Milosavljević AR, Canon F, Nahon L.

Mass Spectrom Rev. 2014 Nov-Dec;33(6):424-41. doi: 10.1002/mas.21398. Epub 2013 Dec 17. Review.

PMID:
24375654
17.

Recommendations for the design and analysis of epigenome-wide association studies.

Michels KB, Binder AM, Dedeurwaerder S, Epstein CB, Greally JM, Gut I, Houseman EA, Izzi B, Kelsey KT, Meissner A, Milosavljevic A, Siegmund KD, Bock C, Irizarry RA.

Nat Methods. 2013 Oct;10(10):949-55. doi: 10.1038/nmeth.2632. Review.

PMID:
24076989
18.

Different treatment strategies are applied to patients with the same periodontal status in general dentistry.

Milosavljevic A, Götrick B, Hallström H, Jansson H, Knutsson K.

Acta Odontol Scand. 2014 May;72(4):290-7. doi: 10.3109/00016357.2013.824605. Epub 2013 Sep 23.

PMID:
24053366
19.

Photodissociation and dissociative photoionization mass spectrometry of proteins and noncovalent protein-ligand complexes.

Canon F, Milosavljević AR, van der Rest G, Réfrégiers M, Nahon L, Sarni-Manchado P, Cheynier V, Giuliani A.

Angew Chem Int Ed Engl. 2013 Aug 5;52(32):8377-81. doi: 10.1002/anie.201304046. Epub 2013 Jul 19. No abstract available.

PMID:
23868751
20.

Nanosolvation-induced stabilization of a protonated peptide dimer isolated in the gas phase.

Milosavljević AR, Cerovski VZ, Canon F, Nahon L, Giuliani A.

Angew Chem Int Ed Engl. 2013 Jul 8;52(28):7286-90. doi: 10.1002/anie.201301667. Epub 2013 Jun 6. No abstract available.

PMID:
23744727
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