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Results: 1 to 20 of 59

1.

Molecular docking studies of anti-cancerous candidates in Hippophae rhamnoides and Hippophae salicifolia.

Usha T, Middha SK, Goyal AK, Karthik M, Manoj D, Faizan S, Goyal P, Prashanth H, Pande V.

J Biomed Res. 2014 Sep;28(5):406-415. Epub 2014 May 19.

PMID:
25332713
[PubMed - as supplied by publisher]
Free PMC Article
2.

A prospective study on adult patients of severe malaria caused by Plasmodium falciparum, Plasmodium vivax and mixed infection from Bikaner, northwest India.

Kochar DK, Das A, Kochar A, Middha S, Acharya J, Tanwar GS, Pakalapati D, Subudhi AK, Boopathi PA, Garg S, Kochar SK.

J Vector Borne Dis. 2014 Jul-Sep;51(3):200-10.

PMID:
25253213
[PubMed - in process]
3.

Comprehensive Assessment of Genetic Variants Within TCF4 in Fuchs' Endothelial Corneal Dystrophy.

Wieben ED, Aleff RA, Eckloff BW, Atkinson EJ, Baheti S, Middha S, Brown WL, Patel SV, Kocher JP, Baratz KH.

Invest Ophthalmol Vis Sci. 2014 Aug 28;55(9):6101-7. doi: 10.1167/iovs.14-14958.

PMID:
25168903
[PubMed - in process]
4.

Characterizing genetic variation of adrenergic signalling pathways in Takotsubo (stress) cardiomyopathy exomes.

Goodloe AH, Evans JM, Middha S, Prasad A, Olson TM.

Eur J Heart Fail. 2014 Sep;16(9):942-9. doi: 10.1002/ejhf.145. Epub 2014 Aug 8.

PMID:
25132214
[PubMed - in process]
5.

HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data.

Yan H, Evans J, Kalmbach M, Moore R, Middha S, Luban S, Wang L, Bhagwate A, Li Y, Sun Z, Chen X, Kocher JP.

BMC Bioinformatics. 2014 Aug 15;15:280. doi: 10.1186/1471-2105-15-280.

PMID:
25128017
[PubMed - in process]
Free PMC Article
6.

Mutational landscape of candidate genes in familial prostate cancer.

Johnson AM, Zuhlke KA, Plotts C, McDonnell SK, Middha S, Riska SM, Schaid DJ, Thibodeau SN, Douglas JA, Cooney KA.

Prostate. 2014 Oct;74(14):1371-8. doi: 10.1002/pros.22849. Epub 2014 Aug 11.

PMID:
25111073
[PubMed - in process]
7.

MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing.

Kalari KR, Nair AA, Bhavsar JD, O'Brien DR, Davila JI, Bockol MA, Nie J, Tang X, Baheti S, Doughty JB, Middha S, Sicotte H, Thompson AE, Asmann YW, Kocher JP.

BMC Bioinformatics. 2014 Jun 27;15:224. doi: 10.1186/1471-2105-15-224.

PMID:
24972667
[PubMed - indexed for MEDLINE]
Free Article
8.

TNNI3K mutation in familial syndrome of conduction system disease, atrial tachyarrhythmia and dilated cardiomyopathy.

Theis JL, Zimmermann MT, Larsen BT, Rybakova IN, Long PA, Evans JM, Middha S, de Andrade M, Moss RL, Wieben ED, Michels VV, Olson TM.

Hum Mol Genet. 2014 Nov 1;23(21):5793-804. doi: 10.1093/hmg/ddu297. Epub 2014 Jun 11.

PMID:
24925317
[PubMed - in process]
Free Article
9.

CAP-miRSeq: a comprehensive analysis pipeline for microRNA sequencing data.

Sun Z, Evans J, Bhagwate A, Middha S, Bockol M, Yan H, Kocher JP.

BMC Genomics. 2014 Jun 3;15:423. doi: 10.1186/1471-2164-15-423.

PMID:
24894665
[PubMed - in process]
Free PMC Article
10.

Natural antisense transcripts in Plasmodium falciparum isolates from patients with complicated malaria.

Subudhi AK, Boopathi PA, Garg S, Middha S, Acharya J, Pakalapati D, Saxena V, Aiyaz M, Orekondy HB, Mugasimangalam RC, Sirohi P, Kochar SK, Kochar DK, Das A.

Exp Parasitol. 2014 Jun;141:39-54. doi: 10.1016/j.exppara.2014.03.008. Epub 2014 Mar 20.

PMID:
24657575
[PubMed - indexed for MEDLINE]
11.

Application of whole exome sequencing in undiagnosed inherited polyneuropathies.

Klein CJ, Middha S, Duan X, Wu Y, Litchy WJ, Gu W, Dyck PJ, Gavrilova RH, Smith DI, Kocher JP, Dyck PJ.

J Neurol Neurosurg Psychiatry. 2014 Nov;85(11):1265-72. doi: 10.1136/jnnp-2013-306740. Epub 2014 Mar 6.

PMID:
24604904
[PubMed - in process]
12.

Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma.

Borad MJ, Champion MD, Egan JB, Liang WS, Fonseca R, Bryce AH, McCullough AE, Barrett MT, Hunt K, Patel MD, Young SW, Collins JM, Silva AC, Condjella RM, Block M, McWilliams RR, Lazaridis KN, Klee EW, Bible KC, Harris P, Oliver GR, Bhavsar JD, Nair AA, Middha S, Asmann Y, Kocher JP, Schahl K, Kipp BR, Barr Fritcher EG, Baker A, Aldrich J, Kurdoglu A, Izatt T, Christoforides A, Cherni I, Nasser S, Reiman R, Phillips L, McDonald J, Adkins J, Mastrian SD, Placek P, Watanabe AT, Lobello J, Han H, Von Hoff D, Craig DW, Stewart AK, Carpten JD.

PLoS Genet. 2014 Feb 13;10(2):e1004135. doi: 10.1371/journal.pgen.1004135. eCollection 2014 Feb.

PMID:
24550739
[PubMed - in process]
Free PMC Article
13.

Whole genome analyses of a well-differentiated liposarcoma reveals novel SYT1 and DDR2 rearrangements.

Egan JB, Barrett MT, Champion MD, Middha S, Lenkiewicz E, Evers L, Francis P, Schmidt J, Shi CX, Van Wier S, Badar S, Ahmann G, Kortuem KM, Boczek NJ, Fonseca R, Craig DW, Carpten JD, Borad MJ, Stewart AK.

PLoS One. 2014 Feb 5;9(2):e87113. doi: 10.1371/journal.pone.0087113. eCollection 2014.

PMID:
24505276
[PubMed - in process]
Free PMC Article
14.

From days to hours: reporting clinically actionable variants from whole genome sequencing.

Middha S, Baheti S, Hart SN, Kocher JP.

PLoS One. 2014 Feb 5;9(2):e86803. doi: 10.1371/journal.pone.0086803. eCollection 2014.

PMID:
24505267
[PubMed - in process]
Free PMC Article
15.

Ubiquitin ligase defect by DCAF8 mutation causes HMSN2 with giant axons.

Klein CJ, Wu Y, Vogel P, Goebel HH, B├Ânnemann C, Zukosky K, Botuyan MV, Duan X, Middha S, Atkinson EJ, Mer G, Dyck PJ.

Neurology. 2014 Mar 11;82(10):873-8. doi: 10.1212/WNL.0000000000000206. Epub 2014 Feb 5.

PMID:
24500646
[PubMed - indexed for MEDLINE]
16.

In silico-based combinatorial pharmacophore modelling and docking studies of GSK-3╬▓ and GK inhibitors of Hippophae.

Middha SK, Goyal AK, Faizan SA, Sanghamitra N, Basistha BC, Usha T.

J Biosci. 2013 Nov;38(4):805-14.

PMID:
24287660
[PubMed - indexed for MEDLINE]
Free Article
17.

Revealing natural antisense transcripts from Plasmodium vivax isolates: evidence of genome regulation in complicated malaria.

Boopathi PA, Subudhi AK, Garg S, Middha S, Acharya J, Pakalapati D, Saxena V, Aiyaz M, Chand B, Mugasimangalam RC, Kochar SK, Sirohi P, Kochar DK, Das A.

Infect Genet Evol. 2013 Dec;20:428-43. doi: 10.1016/j.meegid.2013.09.026. Epub 2013 Oct 11.

PMID:
24121022
[PubMed - indexed for MEDLINE]
18.

Novel TRAF1-ALK fusion identified by deep RNA sequencing of anaplastic large cell lymphoma.

Feldman AL, Vasmatzis G, Asmann YW, Davila J, Middha S, Eckloff BW, Johnson SH, Porcher JC, Ansell SM, Caride A.

Genes Chromosomes Cancer. 2013 Nov;52(11):1097-102. doi: 10.1002/gcc.22104. Epub 2013 Sep 2.

PMID:
23999969
[PubMed - indexed for MEDLINE]
19.

HPLC Evaluation of Phenolic Profile, Nutritive Content, and Antioxidant Capacity of Extracts Obtained from Punica granatum Fruit Peel.

Middha SK, Usha T, Pande V.

Adv Pharmacol Sci. 2013;2013:296236. doi: 10.1155/2013/296236. Epub 2013 Aug 1.

PMID:
23983682
[PubMed]
Free PMC Article
20.

Histone deacetylase inhibition promotes osteoblast maturation by altering the histone H4 epigenome and reduces Akt phosphorylation.

Dudakovic A, Evans JM, Li Y, Middha S, McGee-Lawrence ME, van Wijnen AJ, Westendorf JJ.

J Biol Chem. 2013 Oct 4;288(40):28783-91. doi: 10.1074/jbc.M113.489732. Epub 2013 Aug 12.

PMID:
23940046
[PubMed - indexed for MEDLINE]
Free PMC Article

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