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Results: 9

1.

Taxonomic use of DNA G+C content and DNA-DNA hybridization in the genomic age.

Meier-Kolthoff JP, Klenk HP, Göker M.

Int J Syst Evol Microbiol. 2014 Feb;64(Pt 2):352-6. doi: 10.1099/ijs.0.056994-0.

PMID:
24505073
[PubMed - indexed for MEDLINE]
2.

Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio.

Palaniappan K, Meier-Kolthoff JP, Teshima H, Nolan M, Lapidus A, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin LA, Pitluck S, Liolios K, Mavromatis K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Rohde M, Mayilraj S, Spring S, Detter JC, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Woyke T.

Stand Genomic Sci. 2013 Oct 2;9(1):57-70. doi: 10.4056/sigs.4237901. eCollection 2013 Oct 16.

PMID:
24501645
[PubMed]
Free PMC Article
3.

Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)).

Meier-Kolthoff JP, Lu M, Huntemann M, Lucas S, Lapidus A, Copeland A, Pitluck S, Goodwin LA, Han C, Tapia R, Pötter G, Land M, Ivanova N, Rohde M, Göker M, Detter JC, Woyke T, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2013 Sep 30;9(1):28-41. doi: 10.4056/sigs.4207886. eCollection 2013 Oct 16.

PMID:
24501643
[PubMed]
Free PMC Article
4.

First genome sequences of Achromobacter phages reveal new members of the N4 family.

Wittmann J, Dreiseikelmann B, Rohde M, Meier-Kolthoff JP, Bunk B, Rohde C.

Virol J. 2014 Jan 27;11:14. doi: 10.1186/1743-422X-11-14.

PMID:
24468270
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Pathways and substrate-specific regulation of amino acid degradation in Phaeobacter inhibens DSM 17395 (archetype of the marine Roseobacter clade).

Drüppel K, Hensler M, Trautwein K, Koßmehl S, Wöhlbrand L, Schmidt-Hohagen K, Ulbrich M, Bergen N, Meier-Kolthoff JP, Göker M, Klenk HP, Schomburg D, Rabus R.

Environ Microbiol. 2014 Jan;16(1):218-38. doi: 10.1111/1462-2920.12276. Epub 2013 Oct 27.

PMID:
24165547
[PubMed - indexed for MEDLINE]
6.

When should a DDH experiment be mandatory in microbial taxonomy?

Meier-Kolthoff JP, Göker M, Spröer C, Klenk HP.

Arch Microbiol. 2013 Jun;195(6):413-8. doi: 10.1007/s00203-013-0888-4. Epub 2013 Apr 17.

PMID:
23591456
[PubMed - indexed for MEDLINE]
7.

Genome sequence-based species delimitation with confidence intervals and improved distance functions.

Meier-Kolthoff JP, Auch AF, Klenk HP, Göker M.

BMC Bioinformatics. 2013 Feb 21;14:60. doi: 10.1186/1471-2105-14-60.

PMID:
23432962
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa.

Stamatakis A, Auch AF, Meier-Kolthoff J, Göker M.

BMC Bioinformatics. 2007 Oct 22;8:405.

PMID:
17953748
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

COPYCAT: cophylogenetic analysis tool.

Meier-Kolthoff JP, Auch AF, Huson DH, Göker M.

Bioinformatics. 2007 Apr 1;23(7):898-900. Epub 2007 Jan 31.

PMID:
17267434
[PubMed - indexed for MEDLINE]
Free Article
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