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Results: 1 to 20 of 49

1.

Untangling the hybrid nature of modern pig genomes: a mosaic derived from biogeographically distinct and highly divergent Sus scrofa populations.

Bosse M, Megens HJ, Madsen O, Frantz LA, Paudel Y, Crooijmans RP, Groenen MA.

Mol Ecol. 2014 May 26. doi: 10.1111/mec.12807. [Epub ahead of print]

PMID:
24863459
[PubMed - as supplied by publisher]
2.

On the relationship between an Asian haplotype on chromosome 6 that reduces androstenone levels in boars and the differential expression of SULT2A1 in the testis.

Hidalgo AM, Bastiaansen JW, Harlizius B, Megens HJ, Madsen O, Crooijmans RP, Groenen MA.

BMC Genet. 2014 Jan 9;15:4. doi: 10.1186/1471-2156-15-4.

PMID:
24405739
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Conservation genomic analysis of domestic and wild pig populations from the Iberian Peninsula.

Herrero-Medrano JM, Megens HJ, Groenen MA, Ramis G, Bosse M, Pérez-Enciso M, Crooijmans RP.

BMC Genet. 2013 Oct 30;14:106. doi: 10.1186/1471-2156-14-106.

PMID:
24172017
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus.

Frantz LA, Schraiber JG, Madsen O, Megens HJ, Bosse M, Paudel Y, Semiadi G, Meijaard E, Li N, Crooijmans RP, Archibald AL, Slatkin M, Schook LB, Larson G, Groenen MA.

Genome Biol. 2013;14(9):R107.

PMID:
24070215
[PubMed - in process]
Free PMC Article
5.

Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication.

Paudel Y, Madsen O, Megens HJ, Frantz LA, Bosse M, Bastiaansen JW, Crooijmans RP, Groenen MA.

BMC Genomics. 2013 Jul 5;14:449. doi: 10.1186/1471-2164-14-449.

PMID:
23829399
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Reintroductions and genetic introgression from domestic pigs have shaped the genetic population structure of Northwest European wild boar.

Goedbloed DJ, van Hooft P, Megens HJ, Langenbeck K, Lutz W, Crooijmans RP, van Wieren SE, Ydenberg RC, Prins HH.

BMC Genet. 2013 May 20;14:43. doi: 10.1186/1471-2156-14-43.

PMID:
23688182
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Signatures of diversifying selection in European pig breeds.

Wilkinson S, Lu ZH, Megens HJ, Archibald AL, Haley C, Jackson IJ, Groenen MA, Crooijmans RP, Ogden R, Wiener P.

PLoS Genet. 2013 Apr;9(4):e1003453. doi: 10.1371/journal.pgen.1003453. Epub 2013 Apr 25.

PMID:
23637623
[PubMed - in process]
Free PMC Article
8.

Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs.

Esteve-Codina A, Paudel Y, Ferretti L, Raineri E, Megens HJ, Silió L, Rodríguez MC, Groenen MA, Ramos-Onsins SE, Pérez-Enciso M.

BMC Genomics. 2013 Mar 5;14:148. doi: 10.1186/1471-2164-14-148.

PMID:
23497037
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Porcine colonization of the Americas: a 60k SNP story.

Burgos-Paz W, Souza CA, Megens HJ, Ramayo-Caldas Y, Melo M, Lemús-Flores C, Caal E, Soto HW, Martínez R, Alvarez LA, Aguirre L, Iñiguez V, Revidatti MA, Martínez-López OR, Llambi S, Esteve-Codina A, Rodríguez MC, Crooijmans RP, Paiva SR, Schook LB, Groenen MA, Pérez-Enciso M.

Heredity (Edinb). 2013 Apr;110(4):321-30. doi: 10.1038/hdy.2012.109. Epub 2012 Dec 19.

PMID:
23250008
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Regions of homozygosity in the porcine genome: consequence of demography and the recombination landscape.

Bosse M, Megens HJ, Madsen O, Paudel Y, Frantz LA, Schook LB, Crooijmans RP, Groenen MA.

PLoS Genet. 2012;8(11):e1003100. doi: 10.1371/journal.pgen.1003100. Epub 2012 Nov 29.

PMID:
23209444
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Pig domestication and human-mediated dispersal in western Eurasia revealed through ancient DNA and geometric morphometrics.

Ottoni C, Flink LG, Evin A, Geörg C, De Cupere B, Van Neer W, Bartosiewicz L, Linderholm A, Barnett R, Peters J, Decorte R, Waelkens M, Vanderheyden N, Ricaut FX, Cakirlar C, Cevik O, Hoelzel AR, Mashkour M, Karimlu AF, Seno SS, Daujat J, Brock F, Pinhasi R, Hongo H, Perez-Enciso M, Rasmussen M, Frantz L, Megens HJ, Crooijmans R, Groenen M, Arbuckle B, Benecke N, Vidarsdottir US, Burger J, Cucchi T, Dobney K, Larson G.

Mol Biol Evol. 2013 Apr;30(4):824-32. doi: 10.1093/molbev/mss261. Epub 2012 Nov 22.

PMID:
23180578
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content.

Tortereau F, Servin B, Frantz L, Megens HJ, Milan D, Rohrer G, Wiedmann R, Beever J, Archibald AL, Schook LB, Groenen MA.

BMC Genomics. 2012 Nov 15;13:586. doi: 10.1186/1471-2164-13-586.

PMID:
23152986
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Analyses of pig genomes provide insight into porcine demography and evolution.

Groenen MA, Archibald AL, Uenishi H, Tuggle CK, Takeuchi Y, Rothschild MF, Rogel-Gaillard C, Park C, Milan D, Megens HJ, Li S, Larkin DM, Kim H, Frantz LA, Caccamo M, Ahn H, Aken BL, Anselmo A, Anthon C, Auvil L, Badaoui B, Beattie CW, Bendixen C, Berman D, Blecha F, Blomberg J, Bolund L, Bosse M, Botti S, Bujie Z, Bystrom M, Capitanu B, Carvalho-Silva D, Chardon P, Chen C, Cheng R, Choi SH, Chow W, Clark RC, Clee C, Crooijmans RP, Dawson HD, Dehais P, De Sapio F, Dibbits B, Drou N, Du ZQ, Eversole K, Fadista J, Fairley S, Faraut T, Faulkner GJ, Fowler KE, Fredholm M, Fritz E, Gilbert JG, Giuffra E, Gorodkin J, Griffin DK, Harrow JL, Hayward A, Howe K, Hu ZL, Humphray SJ, Hunt T, Hornshøj H, Jeon JT, Jern P, Jones M, Jurka J, Kanamori H, Kapetanovic R, Kim J, Kim JH, Kim KW, Kim TH, Larson G, Lee K, Lee KT, Leggett R, Lewin HA, Li Y, Liu W, Loveland JE, Lu Y, Lunney JK, Ma J, Madsen O, Mann K, Matthews L, McLaren S, Morozumi T, Murtaugh MP, Narayan J, Nguyen DT, Ni P, Oh SJ, Onteru S, Panitz F, Park EW, Park HS, Pascal G, Paudel Y, Perez-Enciso M, Ramirez-Gonzalez R, Reecy JM, Rodriguez-Zas S, Rohrer GA, Rund L, Sang Y, Schachtschneider K, Schraiber JG, Schwartz J, Scobie L, Scott C, Searle S, Servin B, Southey BR, Sperber G, Stadler P, Sweedler JV, Tafer H, Thomsen B, Wali R, Wang J, Wang J, White S, Xu X, Yerle M, Zhang G, Zhang J, Zhang J, Zhao S, Rogers J, Churcher C, Schook LB.

Nature. 2012 Nov 15;491(7424):393-8. doi: 10.1038/nature11622.

PMID:
23151582
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Strong signatures of selection in the domestic pig genome.

Rubin CJ, Megens HJ, Martinez Barrio A, Maqbool K, Sayyab S, Schwochow D, Wang C, Carlborg Ö, Jern P, Jørgensen CB, Archibald AL, Fredholm M, Groenen MA, Andersson L.

Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19529-36. doi: 10.1073/pnas.1217149109. Epub 2012 Nov 14.

PMID:
23151514
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Development of a genetic tool for product regulation in the diverse British pig breed market.

Wilkinson S, Archibald AL, Haley CS, Megens HJ, Crooijmans RP, Groenen MA, Wiener P, Ogden R.

BMC Genomics. 2012 Nov 15;13:580. doi: 10.1186/1471-2164-13-580.

PMID:
23150935
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Global lack of flyway structure in a cosmopolitan bird revealed by a genome wide survey of single nucleotide polymorphisms.

Kraus RH, van Hooft P, Megens HJ, Tsvey A, Fokin SY, Ydenberg RC, Prins HH.

Mol Ecol. 2013 Jan;22(1):41-55. doi: 10.1111/mec.12098. Epub 2012 Oct 30.

PMID:
23110616
[PubMed - indexed for MEDLINE]
17.

Farm-by-farm analysis of microsatellite, mtDNA and SNP genotype data reveals inbreeding and crossbreeding as threats to the survival of a native Spanish pig breed.

Herrero-Medrano JM, Megens HJ, Crooijmans RP, Abellaneda JM, Ramis G.

Anim Genet. 2013 Jun;44(3):259-66. doi: 10.1111/age.12001. Epub 2012 Oct 11.

PMID:
23051150
[PubMed - indexed for MEDLINE]
18.

Whole genome SNP discovery and analysis of genetic diversity in Turkey (Meleagris gallopavo).

Aslam ML, Bastiaansen JW, Elferink MG, Megens HJ, Crooijmans RP, Blomberg le A, Fleischer RC, Van Tassell CP, Sonstegard TS, Schroeder SG, Groenen MA, Long JA.

BMC Genomics. 2012 Aug 14;13:391. doi: 10.1186/1471-2164-13-391.

PMID:
22891612
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Genome-wide single nucleotide polymorphism analysis reveals recent genetic introgression from domestic pigs into Northwest European wild boar populations.

Goedbloed DJ, Megens HJ, Van Hooft P, Herrero-Medrano JM, Lutz W, Alexandri P, Crooijmans RP, Groenen M, Van Wieren SE, Ydenberg RC, Prins HH.

Mol Ecol. 2013 Feb;22(3):856-66. doi: 10.1111/j.1365-294X.2012.05670.x. Epub 2012 Jun 26.

PMID:
22731769
[PubMed - indexed for MEDLINE]
20.

Widespread horizontal genomic exchange does not erode species barriers among sympatric ducks.

Kraus RH, Kerstens HH, van Hooft P, Megens HJ, Elmberg J, Tsvey A, Sartakov D, Soloviev SA, Crooijmans RP, Groenen MA, Ydenberg RC, Prins HH.

BMC Evol Biol. 2012 Apr 2;12:45. doi: 10.1186/1471-2148-12-45.

PMID:
22462721
[PubMed - indexed for MEDLINE]
Free PMC Article

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