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Results: 1 to 20 of 59

1.

Copy number variation in the speciation of pigs: a possible prominent role for olfactory receptors.

Paudel Y, Madsen O, Megens HJ, Frantz LA, Bosse M, Crooijmans RP, Groenen MA.

BMC Genomics. 2015 Apr 22;16(1):330. doi: 10.1186/s12864-015-1449-9.

2.

Adaptive Evolution of Toll-Like Receptors (TLRs) in the Family Suidae.

Darfour-Oduro KA, Megens HJ, Roca AL, Groenen MA, Schook LB.

PLoS One. 2015 Apr 20;10(4):e0124069. doi: 10.1371/journal.pone.0124069. eCollection 2015.

3.

Evolution of Tibetan wild boars.

Frantz LA, Madsen O, Megens HJ, Schraiber JG, Paudel Y, Bosse M, Crooijmans RP, Larson G, Groenen MA.

Nat Genet. 2015 Mar;47(3):188-9. doi: 10.1038/ng.3197. No abstract available.

PMID:
25711859
4.

Hybrid origin of European commercial pigs examined by an in-depth haplotype analysis on chromosome 1.

Bosse M, Madsen O, Megens HJ, Frantz LA, Paudel Y, Crooijmans RP, Groenen MA.

Front Genet. 2015 Jan 5;5:442. doi: 10.3389/fgene.2014.00442. eCollection 2014.

5.

Genome-wide candidate regions for selective sweeps revealed through massive parallel sequencing of DNA across ten turkey populations.

Aslam ML, Bastiaansen JW, Megens HJ, Crooijmans RP, Nasreen F, Blomberg le A, Van Tassell CP, Sonstegard TS, Schroeder SG, Groenen MA, Long JA.

BMC Genet. 2014 Nov 25;15:117. doi: 10.1186/s12863-014-0117-4.

6.

Testing models of speciation from genome sequences: divergence and asymmetric admixture in Island South-East Asian Sus species during the Plio-Pleistocene climatic fluctuations.

Frantz LA, Madsen O, Megens HJ, Groenen MA, Lohse K.

Mol Ecol. 2014 Nov;23(22):5566-74. doi: 10.1111/mec.12958. Epub 2014 Nov 5.

7.

Systematic differences in the response of genetic variation to pedigree and genome-based selection methods.

Heidaritabar M, Vereijken A, Muir WM, Meuwissen T, Cheng H, Megens HJ, Groenen MA, Bastiaansen JW.

Heredity (Edinb). 2014 Dec;113(6):503-13. doi: 10.1038/hdy.2014.55. Epub 2014 Jul 30.

PMID:
25074573
8.

Whole-genome sequence analysis reveals differences in population management and selection of European low-input pig breeds.

Herrero-Medrano JM, Megens HJ, Groenen MA, Bosse M, Pérez-Enciso M, Crooijmans RP.

BMC Genomics. 2014 Jul 16;15:601. doi: 10.1186/1471-2164-15-601.

9.

Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression.

Bosse M, Megens HJ, Frantz LA, Madsen O, Larson G, Paudel Y, Duijvesteijn N, Harlizius B, Hagemeijer Y, Crooijmans RP, Groenen MA.

Nat Commun. 2014 Jul 15;5:4392. doi: 10.1038/ncomms5392.

10.

Untangling the hybrid nature of modern pig genomes: a mosaic derived from biogeographically distinct and highly divergent Sus scrofa populations.

Bosse M, Megens HJ, Madsen O, Frantz LA, Paudel Y, Crooijmans RP, Groenen MA.

Mol Ecol. 2014 Aug;23(16):4089-102. doi: 10.1111/mec.12807. Epub 2014 Jun 16.

11.

On the relationship between an Asian haplotype on chromosome 6 that reduces androstenone levels in boars and the differential expression of SULT2A1 in the testis.

Hidalgo AM, Bastiaansen JW, Harlizius B, Megens HJ, Madsen O, Crooijmans RP, Groenen MA.

BMC Genet. 2014 Jan 9;15:4. doi: 10.1186/1471-2156-15-4.

12.

Conservation genomic analysis of domestic and wild pig populations from the Iberian Peninsula.

Herrero-Medrano JM, Megens HJ, Groenen MA, Ramis G, Bosse M, Pérez-Enciso M, Crooijmans RP.

BMC Genet. 2013 Oct 30;14:106. doi: 10.1186/1471-2156-14-106.

13.

Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus.

Frantz LA, Schraiber JG, Madsen O, Megens HJ, Bosse M, Paudel Y, Semiadi G, Meijaard E, Li N, Crooijmans RP, Archibald AL, Slatkin M, Schook LB, Larson G, Groenen MA.

Genome Biol. 2013;14(9):R107.

14.

Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication.

Paudel Y, Madsen O, Megens HJ, Frantz LA, Bosse M, Bastiaansen JW, Crooijmans RP, Groenen MA.

BMC Genomics. 2013 Jul 5;14:449. doi: 10.1186/1471-2164-14-449.

15.

Reintroductions and genetic introgression from domestic pigs have shaped the genetic population structure of Northwest European wild boar.

Goedbloed DJ, van Hooft P, Megens HJ, Langenbeck K, Lutz W, Crooijmans RP, van Wieren SE, Ydenberg RC, Prins HH.

BMC Genet. 2013 May 20;14:43. doi: 10.1186/1471-2156-14-43.

16.

Signatures of diversifying selection in European pig breeds.

Wilkinson S, Lu ZH, Megens HJ, Archibald AL, Haley C, Jackson IJ, Groenen MA, Crooijmans RP, Ogden R, Wiener P.

PLoS Genet. 2013 Apr;9(4):e1003453. doi: 10.1371/journal.pgen.1003453. Epub 2013 Apr 25.

17.

Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs.

Esteve-Codina A, Paudel Y, Ferretti L, Raineri E, Megens HJ, Silió L, Rodríguez MC, Groenen MA, Ramos-Onsins SE, Pérez-Enciso M.

BMC Genomics. 2013 Mar 5;14:148. doi: 10.1186/1471-2164-14-148.

18.

Porcine colonization of the Americas: a 60k SNP story.

Burgos-Paz W, Souza CA, Megens HJ, Ramayo-Caldas Y, Melo M, Lemús-Flores C, Caal E, Soto HW, Martínez R, Alvarez LA, Aguirre L, Iñiguez V, Revidatti MA, Martínez-López OR, Llambi S, Esteve-Codina A, Rodríguez MC, Crooijmans RP, Paiva SR, Schook LB, Groenen MA, Pérez-Enciso M.

Heredity (Edinb). 2013 Apr;110(4):321-30. doi: 10.1038/hdy.2012.109. Epub 2012 Dec 19.

19.

Regions of homozygosity in the porcine genome: consequence of demography and the recombination landscape.

Bosse M, Megens HJ, Madsen O, Paudel Y, Frantz LA, Schook LB, Crooijmans RP, Groenen MA.

PLoS Genet. 2012;8(11):e1003100. doi: 10.1371/journal.pgen.1003100. Epub 2012 Nov 29.

20.

Pig domestication and human-mediated dispersal in western Eurasia revealed through ancient DNA and geometric morphometrics.

Ottoni C, Flink LG, Evin A, Geörg C, De Cupere B, Van Neer W, Bartosiewicz L, Linderholm A, Barnett R, Peters J, Decorte R, Waelkens M, Vanderheyden N, Ricaut FX, Cakirlar C, Cevik O, Hoelzel AR, Mashkour M, Karimlu AF, Seno SS, Daujat J, Brock F, Pinhasi R, Hongo H, Perez-Enciso M, Rasmussen M, Frantz L, Megens HJ, Crooijmans R, Groenen M, Arbuckle B, Benecke N, Vidarsdottir US, Burger J, Cucchi T, Dobney K, Larson G.

Mol Biol Evol. 2013 Apr;30(4):824-32. doi: 10.1093/molbev/mss261. Epub 2012 Nov 22.

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