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Results: 1 to 20 of 53

1.

Testing models of speciation from genome sequences: divergence and asymmetric admixture in Island Southeast Asian Sus species during the Plio-Pleistocene climatic fluctuations.

Frantz LA, Madsen O, Megens HJ, Groenen MA, Lohse K.

Mol Ecol. 2014 Oct 8. doi: 10.1111/mec.12958. [Epub ahead of print]

PMID:
25294645
[PubMed - as supplied by publisher]
2.

Systematic differences in the response of genetic variation to pedigree and genome-based selection methods.

Heidaritabar M, Vereijken A, Muir WM, Meuwissen T, Cheng H, Megens HJ, Groenen MA, Bastiaansen JW.

Heredity (Edinb). 2014 Jul 30. doi: 10.1038/hdy.2014.55. [Epub ahead of print]

PMID:
25074573
[PubMed - as supplied by publisher]
3.

Whole-genome sequence analysis reveals differences in population management and selection of European low-input pig breeds.

Herrero-Medrano JM, Megens HJ, Groenen MA, Bosse M, Pérez-Enciso M, Crooijmans RP.

BMC Genomics. 2014 Jul 16;15:601. doi: 10.1186/1471-2164-15-601.

PMID:
25030608
[PubMed - in process]
Free PMC Article
4.

Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression.

Bosse M, Megens HJ, Frantz LA, Madsen O, Larson G, Paudel Y, Duijvesteijn N, Harlizius B, Hagemeijer Y, Crooijmans RP, Groenen MA.

Nat Commun. 2014 Jul 15;5:4392. doi: 10.1038/ncomms5392.

PMID:
25025832
[PubMed - in process]
5.

Untangling the hybrid nature of modern pig genomes: a mosaic derived from biogeographically distinct and highly divergent Sus scrofa populations.

Bosse M, Megens HJ, Madsen O, Frantz LA, Paudel Y, Crooijmans RP, Groenen MA.

Mol Ecol. 2014 Aug;23(16):4089-102. doi: 10.1111/mec.12807. Epub 2014 Jun 16.

PMID:
24863459
[PubMed - in process]
6.

On the relationship between an Asian haplotype on chromosome 6 that reduces androstenone levels in boars and the differential expression of SULT2A1 in the testis.

Hidalgo AM, Bastiaansen JW, Harlizius B, Megens HJ, Madsen O, Crooijmans RP, Groenen MA.

BMC Genet. 2014 Jan 9;15:4. doi: 10.1186/1471-2156-15-4.

PMID:
24405739
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Conservation genomic analysis of domestic and wild pig populations from the Iberian Peninsula.

Herrero-Medrano JM, Megens HJ, Groenen MA, Ramis G, Bosse M, Pérez-Enciso M, Crooijmans RP.

BMC Genet. 2013 Oct 30;14:106. doi: 10.1186/1471-2156-14-106.

PMID:
24172017
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus.

Frantz LA, Schraiber JG, Madsen O, Megens HJ, Bosse M, Paudel Y, Semiadi G, Meijaard E, Li N, Crooijmans RP, Archibald AL, Slatkin M, Schook LB, Larson G, Groenen MA.

Genome Biol. 2013;14(9):R107.

PMID:
24070215
[PubMed - in process]
Free PMC Article
9.

Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication.

Paudel Y, Madsen O, Megens HJ, Frantz LA, Bosse M, Bastiaansen JW, Crooijmans RP, Groenen MA.

BMC Genomics. 2013 Jul 5;14:449. doi: 10.1186/1471-2164-14-449.

PMID:
23829399
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Reintroductions and genetic introgression from domestic pigs have shaped the genetic population structure of Northwest European wild boar.

Goedbloed DJ, van Hooft P, Megens HJ, Langenbeck K, Lutz W, Crooijmans RP, van Wieren SE, Ydenberg RC, Prins HH.

BMC Genet. 2013 May 20;14:43. doi: 10.1186/1471-2156-14-43.

PMID:
23688182
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Signatures of diversifying selection in European pig breeds.

Wilkinson S, Lu ZH, Megens HJ, Archibald AL, Haley C, Jackson IJ, Groenen MA, Crooijmans RP, Ogden R, Wiener P.

PLoS Genet. 2013 Apr;9(4):e1003453. doi: 10.1371/journal.pgen.1003453. Epub 2013 Apr 25.

PMID:
23637623
[PubMed - in process]
Free PMC Article
12.

Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs.

Esteve-Codina A, Paudel Y, Ferretti L, Raineri E, Megens HJ, Silió L, Rodríguez MC, Groenen MA, Ramos-Onsins SE, Pérez-Enciso M.

BMC Genomics. 2013 Mar 5;14:148. doi: 10.1186/1471-2164-14-148.

PMID:
23497037
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Porcine colonization of the Americas: a 60k SNP story.

Burgos-Paz W, Souza CA, Megens HJ, Ramayo-Caldas Y, Melo M, Lemús-Flores C, Caal E, Soto HW, Martínez R, Alvarez LA, Aguirre L, Iñiguez V, Revidatti MA, Martínez-López OR, Llambi S, Esteve-Codina A, Rodríguez MC, Crooijmans RP, Paiva SR, Schook LB, Groenen MA, Pérez-Enciso M.

Heredity (Edinb). 2013 Apr;110(4):321-30. doi: 10.1038/hdy.2012.109. Epub 2012 Dec 19.

PMID:
23250008
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Regions of homozygosity in the porcine genome: consequence of demography and the recombination landscape.

Bosse M, Megens HJ, Madsen O, Paudel Y, Frantz LA, Schook LB, Crooijmans RP, Groenen MA.

PLoS Genet. 2012;8(11):e1003100. doi: 10.1371/journal.pgen.1003100. Epub 2012 Nov 29.

PMID:
23209444
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Pig domestication and human-mediated dispersal in western Eurasia revealed through ancient DNA and geometric morphometrics.

Ottoni C, Flink LG, Evin A, Geörg C, De Cupere B, Van Neer W, Bartosiewicz L, Linderholm A, Barnett R, Peters J, Decorte R, Waelkens M, Vanderheyden N, Ricaut FX, Cakirlar C, Cevik O, Hoelzel AR, Mashkour M, Karimlu AF, Seno SS, Daujat J, Brock F, Pinhasi R, Hongo H, Perez-Enciso M, Rasmussen M, Frantz L, Megens HJ, Crooijmans R, Groenen M, Arbuckle B, Benecke N, Vidarsdottir US, Burger J, Cucchi T, Dobney K, Larson G.

Mol Biol Evol. 2013 Apr;30(4):824-32. doi: 10.1093/molbev/mss261. Epub 2012 Nov 22.

PMID:
23180578
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content.

Tortereau F, Servin B, Frantz L, Megens HJ, Milan D, Rohrer G, Wiedmann R, Beever J, Archibald AL, Schook LB, Groenen MA.

BMC Genomics. 2012 Nov 15;13:586. doi: 10.1186/1471-2164-13-586.

PMID:
23152986
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Analyses of pig genomes provide insight into porcine demography and evolution.

Groenen MA, Archibald AL, Uenishi H, Tuggle CK, Takeuchi Y, Rothschild MF, Rogel-Gaillard C, Park C, Milan D, Megens HJ, Li S, Larkin DM, Kim H, Frantz LA, Caccamo M, Ahn H, Aken BL, Anselmo A, Anthon C, Auvil L, Badaoui B, Beattie CW, Bendixen C, Berman D, Blecha F, Blomberg J, Bolund L, Bosse M, Botti S, Bujie Z, Bystrom M, Capitanu B, Carvalho-Silva D, Chardon P, Chen C, Cheng R, Choi SH, Chow W, Clark RC, Clee C, Crooijmans RP, Dawson HD, Dehais P, De Sapio F, Dibbits B, Drou N, Du ZQ, Eversole K, Fadista J, Fairley S, Faraut T, Faulkner GJ, Fowler KE, Fredholm M, Fritz E, Gilbert JG, Giuffra E, Gorodkin J, Griffin DK, Harrow JL, Hayward A, Howe K, Hu ZL, Humphray SJ, Hunt T, Hornshøj H, Jeon JT, Jern P, Jones M, Jurka J, Kanamori H, Kapetanovic R, Kim J, Kim JH, Kim KW, Kim TH, Larson G, Lee K, Lee KT, Leggett R, Lewin HA, Li Y, Liu W, Loveland JE, Lu Y, Lunney JK, Ma J, Madsen O, Mann K, Matthews L, McLaren S, Morozumi T, Murtaugh MP, Narayan J, Nguyen DT, Ni P, Oh SJ, Onteru S, Panitz F, Park EW, Park HS, Pascal G, Paudel Y, Perez-Enciso M, Ramirez-Gonzalez R, Reecy JM, Rodriguez-Zas S, Rohrer GA, Rund L, Sang Y, Schachtschneider K, Schraiber JG, Schwartz J, Scobie L, Scott C, Searle S, Servin B, Southey BR, Sperber G, Stadler P, Sweedler JV, Tafer H, Thomsen B, Wali R, Wang J, Wang J, White S, Xu X, Yerle M, Zhang G, Zhang J, Zhang J, Zhao S, Rogers J, Churcher C, Schook LB.

Nature. 2012 Nov 15;491(7424):393-8. doi: 10.1038/nature11622.

PMID:
23151582
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Strong signatures of selection in the domestic pig genome.

Rubin CJ, Megens HJ, Martinez Barrio A, Maqbool K, Sayyab S, Schwochow D, Wang C, Carlborg Ö, Jern P, Jørgensen CB, Archibald AL, Fredholm M, Groenen MA, Andersson L.

Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19529-36. doi: 10.1073/pnas.1217149109. Epub 2012 Nov 14.

PMID:
23151514
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Development of a genetic tool for product regulation in the diverse British pig breed market.

Wilkinson S, Archibald AL, Haley CS, Megens HJ, Crooijmans RP, Groenen MA, Wiener P, Ogden R.

BMC Genomics. 2012 Nov 15;13:580. doi: 10.1186/1471-2164-13-580.

PMID:
23150935
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Global lack of flyway structure in a cosmopolitan bird revealed by a genome wide survey of single nucleotide polymorphisms.

Kraus RH, van Hooft P, Megens HJ, Tsvey A, Fokin SY, Ydenberg RC, Prins HH.

Mol Ecol. 2013 Jan;22(1):41-55. doi: 10.1111/mec.12098. Epub 2012 Oct 30.

PMID:
23110616
[PubMed - indexed for MEDLINE]
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