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Results: 18

1.

Segmentation and quantitative analysis of individual cells in developmental tissues.

Nandy K, Kim J, McCullough DP, McAuliffe M, Meaburn KJ, Yamaguchi TP, Gudla PR, Lockett SJ.

Methods Mol Biol. 2014;1092:235-53. doi: 10.1007/978-1-60327-292-6_16.

PMID:
24318825
[PubMed - indexed for MEDLINE]
2.

Ranked retrieval of segmented nuclei for objective assessment of cancer gene repositioning.

Cukierski WJ, Nandy K, Gudla P, Meaburn KJ, Misteli T, Foran DJ, Lockett SJ.

BMC Bioinformatics. 2012 Sep 12;13:232. doi: 10.1186/1471-2105-13-232.

PMID:
22971117
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Automatic segmentation and supervised learning-based selection of nuclei in cancer tissue images.

Nandy K, Gudla PR, Amundsen R, Meaburn KJ, Misteli T, Lockett SJ.

Cytometry A. 2012 Sep;81(9):743-54. doi: 10.1002/cyto.a.22097. Epub 2012 Jul 31.

PMID:
22899462
[PubMed - indexed for MEDLINE]
Free Article
4.

Supervised learning framework for screening nuclei in tissue sections.

Nandy K, Gudla PR, Amundsen R, Meaburn KJ, Misteli T, Lockett SJ.

Conf Proc IEEE Eng Med Biol Soc. 2011;2011:5989-92. doi: 10.1109/IEMBS.2011.6091480.

PMID:
22255704
[PubMed - indexed for MEDLINE]
5.

Fluorescence in situ hybridization on 3D cultures of tumor cells.

Meaburn KJ.

Methods Mol Biol. 2010;659:323-36. doi: 10.1007/978-1-60761-789-1_25.

PMID:
20809324
[PubMed - indexed for MEDLINE]
6.

Disease-specific gene repositioning in breast cancer.

Meaburn KJ, Gudla PR, Khan S, Lockett SJ, Misteli T.

J Cell Biol. 2009 Dec 14;187(6):801-12. doi: 10.1083/jcb.200909127. Epub .

PMID:
19995938
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Automatic nuclei segmentation and spatial FISH analysis for cancer detection.

Nandy K, Gudla PR, Meaburn KJ, Misteli T, Lockett SJ.

Conf Proc IEEE Eng Med Biol Soc. 2009;2009:6718-21. doi: 10.1109/IEMBS.2009.5332922.

PMID:
19963931
[PubMed - indexed for MEDLINE]
8.

Gene deregulation and spatial genome reorganization near breakpoints prior to formation of translocations in anaplastic large cell lymphoma.

Mathas S, Kreher S, Meaburn KJ, Jöhrens K, Lamprecht B, Assaf C, Sterry W, Kadin ME, Daibata M, Joos S, Hummel M, Stein H, Janz M, Anagnostopoulos I, Schrock E, Misteli T, Dörken B.

Proc Natl Acad Sci U S A. 2009 Apr 7;106(14):5831-6. doi: 10.1073/pnas.0900912106. Epub 2009 Mar 25.

PMID:
19321746
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

The meaning of gene positioning.

Takizawa T, Meaburn KJ, Misteli T.

Cell. 2008 Oct 3;135(1):9-13. doi: 10.1016/j.cell.2008.09.026.

PMID:
18854147
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Positioning of human chromosomes in murine cell hybrids according to synteny.

Meaburn KJ, Newbold RF, Bridger JM.

Chromosoma. 2008 Dec;117(6):579-91. doi: 10.1007/s00412-008-0175-3. Epub 2008 Jul 24.

PMID:
18651158
[PubMed - indexed for MEDLINE]
11.

Segmentation of whole cells and cell nuclei from 3-D optical microscope images using dynamic programming.

McCullough DP, Gudla PR, Harris BS, Collins JA, Meaburn KJ, Nakaya MA, Yamaguchi TP, Misteli T, Lockett SJ.

IEEE Trans Med Imaging. 2008 May;27(5):723-34. doi: 10.1109/TMI.2007.913135.

PMID:
18450544
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A high-throughput system for segmenting nuclei using multiscale techniques.

Gudla PR, Nandy K, Collins J, Meaburn KJ, Misteli T, Lockett SJ.

Cytometry A. 2008 May;73(5):451-66. doi: 10.1002/cyto.a.20550.

PMID:
18338778
[PubMed - indexed for MEDLINE]
Free Article
13.

Locus-specific and activity-independent gene repositioning during early tumorigenesis.

Meaburn KJ, Misteli T.

J Cell Biol. 2008 Jan 14;180(1):39-50. doi: 10.1083/jcb.200708204.

PMID:
18195100
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Primary laminopathy fibroblasts display altered genome organization and apoptosis.

Meaburn KJ, Cabuy E, Bonne G, Levy N, Morris GE, Novelli G, Kill IR, Bridger JM.

Aging Cell. 2007 Apr;6(2):139-53. Epub 2007 Feb 5.

PMID:
17274801
[PubMed - indexed for MEDLINE]
Free Article
15.

Cell biology: chromosome territories.

Meaburn KJ, Misteli T.

Nature. 2007 Jan 25;445(7126):379-781. No abstract available.

PMID:
17251970
[PubMed - indexed for MEDLINE]
16.

Spatial genome organization in the formation of chromosomal translocations.

Meaburn KJ, Misteli T, Soutoglou E.

Semin Cancer Biol. 2007 Feb;17(1):80-90. Epub 2006 Oct 26. Review.

PMID:
17137790
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Chromosome positioning is largely unaffected in lymphoblastoid cell lines containing emerin or A-type lamin mutations.

Meaburn KJ, Levy N, Toniolo D, Bridger JM.

Biochem Soc Trans. 2005 Dec;33(Pt 6):1438-40.

PMID:
16246140
[PubMed - indexed for MEDLINE]
18.

The manipulation of chromosomes by mankind: the uses of microcell-mediated chromosome transfer.

Meaburn KJ, Parris CN, Bridger JM.

Chromosoma. 2005 Sep;114(4):263-74. Epub 2005 Oct 15. Review.

PMID:
16133353
[PubMed - indexed for MEDLINE]
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