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Genome sequencing of the extinct Eurasian wild aurochs, Bos primigenius, illuminates the phylogeography and evolution of cattle.

Park SD, Magee DA, McGettigan PA, Teasdale MD, Edwards CJ, Lohan AJ, Murphy A, Braud M, Donoghue MT, Liu Y, Chamberlain AT, Rue-Albrecht K, Schroeder S, Spillane C, Tai S, Bradley DG, Sonstegard TS, Loftus BJ, MacHugh DE.

Genome Biol. 2015 Oct 26;16:234. doi: 10.1186/s13059-015-0790-2.


RNA sequencing provides exquisite insight into the manipulation of the alveolar macrophage by tubercle bacilli.

Nalpas NC, Magee DA, Conlon KM, Browne JA, Healy C, McLoughlin KE, Rue-Albrecht K, McGettigan PA, Killick KE, Gormley E, Gordon SV, MacHugh DE.

Sci Rep. 2015 Sep 8;5:13629. doi: 10.1038/srep13629.


N-glycan profiling of bovine follicular fluid at key dominant follicle developmental stages.

Tharmalingam-Jaikaran T, Walsh SW, McGettigan PA, Potter O, Struwe WB, Evans AC, Rudd PM, Carrington SD.

Reproduction. 2014 Dec;148(6):569-80. doi: 10.1530/REP-14-0035. Epub 2014 Sep 11.


Epigenetic processes in the male germline.

O'Doherty AM, McGettigan PA.

Reprod Fertil Dev. 2014 Sep 9. doi: 10.1071/RD14167. [Epub ahead of print]


Expression of microRNAs and their target genes and pathways associated with ovarian follicle development in cattle.

Zielak-Steciwko AE, Browne JA, McGettigan PA, Gajewska M, Dzięcioł M, Szulc T, Evans AC.

Physiol Genomics. 2014 Oct 1;46(19):735-45. doi: 10.1152/physiolgenomics.00036.2014. Epub 2014 Aug 5.


Towards the identification of a genetic basis for Landau-Kleffner syndrome.

Conroy J, McGettigan PA, McCreary D, Shah N, Collins K, Parry-Fielder B, Moran M, Hanrahan D, Deonna TW, Korff CM, Webb D, Ennis S, Lynch SA, King MD.

Epilepsia. 2014 Jun;55(6):858-65. doi: 10.1111/epi.12645. Epub 2014 May 14.


Unexpected genetic heterogeneity for primary ciliary dyskinesia in the Irish Traveller population.

Casey JP, McGettigan PA, Healy F, Hogg C, Reynolds A, Kennedy BN, Ennis S, Slattery D, Lynch SA.

Eur J Hum Genet. 2015 Feb;23(2):210-7. doi: 10.1038/ejhg.2014.79. Epub 2014 May 14.


Proteomic analysis of uterine fluid during the pre-implantation period of pregnancy in cattle.

Forde N, McGettigan PA, Mehta JP, O'Hara L, Mamo S, Bazer FW, Spencer TE, Lonergan P.

Reproduction. 2014 Apr 8;147(5):575-87. doi: 10.1530/REP-13-0010. Print 2014 May.


Alterations in expression of endometrial genes coding for proteins secreted into the uterine lumen during conceptus elongation in cattle.

Forde N, Mehta JP, McGettigan PA, Mamo S, Bazer FW, Spencer TE, Lonergan P.

BMC Genomics. 2013 May 10;14:321. doi: 10.1186/1471-2164-14-321.


Transcriptomics in the RNA-seq era.

McGettigan PA.

Curr Opin Chem Biol. 2013 Feb;17(1):4-11. doi: 10.1016/j.cbpa.2012.12.008. Epub 2013 Jan 2. Review.


Molecular aspects of mucin biosynthesis and mucus formation in the bovine cervix during the periestrous period.

Pluta K, McGettigan PA, Reid CJ, Browne JA, Irwin JA, Tharmalingam T, Corfield A, Baird A, Loftus BJ, Evans AC, Carrington SD.

Physiol Genomics. 2012 Dec 18;44(24):1165-78. doi: 10.1152/physiolgenomics.00088.2012. Epub 2012 Oct 23.


Physiological status alters immunological regulation of bovine follicle differentiation in dairy cattle.

Walsh SW, Fair T, Browne JA, Evans AC, McGettigan PA.

J Reprod Immunol. 2012 Dec;96(1-2):34-44. doi: 10.1016/j.jri.2012.07.002. Epub 2012 Sep 12.


Evidence for an early endometrial response to pregnancy in cattle: both dependent upon and independent of interferon tau.

Forde N, Duffy GB, McGettigan PA, Browne JA, Mehta JP, Kelly AK, Mansouri-Attia N, Sandra O, Loftus BJ, Crowe MA, Fair T, Roche JF, Lonergan P, Evans AC.

Physiol Genomics. 2012 Aug 17;44(16):799-810. doi: 10.1152/physiolgenomics.00067.2012. Epub 2012 Jul 3.


Effect of the metabolic environment at key stages of follicle development in cattle: focus on steroid biosynthesis.

Walsh SW, Mehta JP, McGettigan PA, Browne JA, Forde N, Alibrahim RM, Mulligan FJ, Loftus B, Crowe MA, Matthews D, Diskin M, Mihm M, Evans AC.

Physiol Genomics. 2012 May 1;44(9):504-17. doi: 10.1152/physiolgenomics.00178.2011. Epub 2012 Mar 13.


Polymorphism discovery and allele frequency estimation using high-throughput DNA sequencing of target-enriched pooled DNA samples.

Mullen MP, Creevey CJ, Berry DP, McCabe MS, Magee DA, Howard DJ, Killeen AP, Park SD, McGettigan PA, Lucy MC, Machugh DE, Waters SM.

BMC Genomics. 2012 Jan 11;13:16. doi: 10.1186/1471-2164-13-16.


Conceptus-induced changes in the endometrial transcriptome: how soon does the cow know she is pregnant?

Forde N, Carter F, Spencer TE, Bazer FW, Sandra O, Mansouri-Attia N, Okumu LA, McGettigan PA, Mehta JP, McBride R, O'Gaora P, Roche JF, Lonergan P.

Biol Reprod. 2011 Jul;85(1):144-56. doi: 10.1095/biolreprod.110.090019. Epub 2011 Feb 23.


Characterization of the equine skeletal muscle transcriptome identifies novel functional responses to exercise training.

McGivney BA, McGettigan PA, Browne JA, Evans AC, Fonseca RG, Loftus BJ, Lohan A, MacHugh DE, Murphy BA, Katz LM, Hill EW.

BMC Genomics. 2010 Jun 23;11:398. doi: 10.1186/1471-2164-11-398.


A complete mitochondrial genome sequence from a mesolithic wild aurochs (Bos primigenius).

Edwards CJ, Magee DA, Park SD, McGettigan PA, Lohan AJ, Murphy A, Finlay EK, Shapiro B, Chamberlain AT, Richards MB, Bradley DG, Loftus BJ, MacHugh DE.

PLoS One. 2010 Feb 17;5(2):e9255. doi: 10.1371/journal.pone.0009255.


Temporal dysregulation of cortical gene expression in the isolation reared Wistar rat.

Murphy KJ, Ter Horst JP, Cassidy AW, DeSouza IE, Morgunova M, Li C, Connole LM, O'Sullivan NC, Loscher JS, Brady AT, Rombach N, Connellan J, McGettigan PA, Scully D, Fedriani R, Lukasz B, Moran MP, McCabe OM, Wantuch CM, Hughes ZA, Mulvany SK, Higgins DG, Pangalos MN, Marquis KL, O'Connor WT, Ring RH, von Schack D, Regan CM.

J Neurochem. 2010 May;113(3):601-14. doi: 10.1111/j.1471-4159.2010.06617.x. Epub 2010 Jan 24.


Hippocampal region-specific regulation of NF-kappaB may contribute to learning-associated synaptic reorganisation.

O'Sullivan NC, Croydon L, McGettigan PA, Pickering M, Murphy KJ.

Brain Res Bull. 2010 Mar 16;81(4-5):385-90. doi: 10.1016/j.brainresbull.2009.11.001. Epub 2009 Nov 10.

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