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Results: 1 to 20 of 86

1.

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication.

Wang M, Yu Y, Haberer G, Marri PR, Fan C, Goicoechea JL, Zuccolo A, Song X, Kudrna D, Ammiraju JS, Cossu RM, Maldonado C, Chen J, Lee S, Sisneros N, de Baynast K, Golser W, Wissotski M, Kim W, Sanchez P, Ndjiondjop MN, Sanni K, Long M, Carney J, Panaud O, Wicker T, Machado CA, Chen M, Mayer KF, Rounsley S, Wing RA.

Nat Genet. 2014 Jul 27. doi: 10.1038/ng.3044. [Epub ahead of print]

PMID:
25064006
[PubMed - as supplied by publisher]
2.

Ancient hybridizations among the ancestral genomes of bread wheat.

Marcussen T, Sandve SR, Heier L, Spannagl M, Pfeifer M; International Wheat Genome Sequencing Consortium,, Jakobsen KS, Wulff BB, Steuernagel B, Mayer KF, Olsen OA.

Science. 2014 Jul 18;345(6194):1250092. doi: 10.1126/science.1250092.

PMID:
25035499
[PubMed - in process]
3.

Genome interplay in the grain transcriptome of hexaploid bread wheat.

Pfeifer M, Kugler KG, Sandve SR, Zhan B, Rudi H, Hvidsten TR; International Wheat Genome Sequencing Consortium, Mayer KF, Olsen OA.

Science. 2014 Jul 18;345(6194):1250091. doi: 10.1126/science.1250091.

PMID:
25035498
[PubMed - in process]
4.

Slicing the wheat genome. Introduction.

Eversole K, Feuillet C, Mayer KF, Rogers J.

Science. 2014 Jul 18;345(6194):285-7. doi: 10.1126/science.1257983. No abstract available.

PMID:
25035484
[PubMed - in process]
5.

Separating the wheat from the chaff - a strategy to utilize plant genetic resources from ex situ genebanks.

Keilwagen J, Kilian B, Özkan H, Babben S, Perovic D, Mayer KF, Walther A, Poskar CH, Ordon F, Eversole K, Börner A, Ganal M, Knüpffer H, Graner A, Friedel S.

Sci Rep. 2014 Jun 10;4:5231. doi: 10.1038/srep05231.

PMID:
24912875
[PubMed - in process]
Free PMC Article
6.

Extensive and Biased Intergenomic Non-Reciprocal DNA Exchanges Shaped a Nascent Polyploid Genome, Gossypium (Cotton).

Guo H, Wang X, Gundlach H, Mayer KF, Peterson DG, Scheffler BE, Chee PW, Paterson AH.

Genetics. 2014 Jun 6. pii: genetics.114.166124. [Epub ahead of print]

PMID:
24907262
[PubMed - as supplied by publisher]
Free Article
7.

RNASeqExpressionBrowser-a web interface to browse and visualize high-throughput expression data.

Nussbaumer T, Kugler KG, Bader KC, Sharma S, Seidel M, Mayer KF.

Bioinformatics. 2014 May 14. pii: btu334. [Epub ahead of print]

PMID:
24833805
[PubMed - as supplied by publisher]
8.

Whole-genome profiling and shotgun sequencing delivers an anchored, gene-decorated, physical map assembly of bread wheat chromosome 6A.

Poursarebani N, Nussbaumer T, Simková H, Safář J, Witsenboer H, van Oeveren J, Doležel J, Mayer KF, Stein N, Schnurbusch T.

Plant J. 2014 Jul;79(2):334-47. doi: 10.1111/tpj.12550. Epub 2014 Jun 19.

PMID:
24813060
[PubMed - in process]
9.

An improved genome release (version Mt4.0) for the model legume Medicago truncatula.

Tang H, Krishnakumar V, Bidwell S, Rosen B, Chan A, Zhou S, Gentzbittel L, Childs KL, Yandell M, Gundlach H, Mayer KF, Schwartz DC, Town CD.

BMC Genomics. 2014 Apr 27;15:312. doi: 10.1186/1471-2164-15-312.

PMID:
24767513
[PubMed - in process]
Free Article
10.

A first genetic map of date palm (Phoenix dactylifera) reveals long-range genome structure conservation in the palms.

Mathew LS, Spannagl M, Al-Malki A, George B, Torres MF, Al-Dous EK, Al-Azwani EK, Hussein E, Mathew S, Mayer KF, Mohamoud YA, Suhre K, Malek JA.

BMC Genomics. 2014 Apr 15;15:285. doi: 10.1186/1471-2164-15-285.

PMID:
24735434
[PubMed - in process]
Free PMC Article
11.

Meta-Analysis of Retrograde Signaling in Arabidopsis thaliana Reveals a Core Module of Genes Embedded in Complex Cellular Signaling Networks.

Gläßer C, Haberer G, Finkemeier I, Pfannschmidt T, Kleine T, Leister D, Dietz KJ, Häusler RE, Grimm B, Mayer KF.

Mol Plant. 2014 Jul;7(7):1167-90. doi: 10.1093/mp/ssu042. Epub 2014 Apr 9.

PMID:
24719466
[PubMed - in process]
12.

Plant genome sequencing - applications for crop improvement.

Bolger ME, Weisshaar B, Scholz U, Stein N, Usadel B, Mayer KF.

Curr Opin Biotechnol. 2014 Apr;26:31-7. doi: 10.1016/j.copbio.2013.08.019. Epub 2013 Sep 21. Review.

PMID:
24679255
[PubMed - indexed for MEDLINE]
13.

The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle.

Wang W, Haberer G, Gundlach H, Gläßer C, Nussbaumer T, Luo MC, Lomsadze A, Borodovsky M, Kerstetter RA, Shanklin J, Byrant DW, Mockler TC, Appenroth KJ, Grimwood J, Jenkins J, Chow J, Choi C, Adam C, Cao XH, Fuchs J, Schubert I, Rokhsar D, Schmutz J, Michael TP, Mayer KF, Messing J.

Nat Commun. 2014;5:3311. doi: 10.1038/ncomms4311.

PMID:
24548928
[PubMed - in process]
Free PMC Article
14.

Sequence-based analysis of translocations and inversions in bread wheat (Triticum aestivum L.).

Ma J, Stiller J, Berkman PJ, Wei Y, Rogers J, Feuillet C, Dolezel J, Mayer KF, Eversole K, Zheng YL, Liu C.

PLoS One. 2013 Nov 15;8(11):e79329. doi: 10.1371/journal.pone.0079329. eCollection 2013.

PMID:
24260197
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms.

Ariyadasa R, Mascher M, Nussbaumer T, Schulte D, Frenkel Z, Poursarebani N, Zhou R, Steuernagel B, Gundlach H, Taudien S, Felder M, Platzer M, Himmelbach A, Schmutzer T, Hedley PE, Muehlbauer GJ, Scholz U, Korol A, Mayer KF, Waugh R, Langridge P, Graner A, Stein N.

Plant Physiol. 2014 Jan;164(1):412-23. doi: 10.1104/pp.113.228213. Epub 2013 Nov 15.

PMID:
24243933
[PubMed - in process]
Free PMC Article
16.

Quantitative trait loci-dependent analysis of a gene co-expression network associated with Fusarium head blight resistance in bread wheat (Triticum aestivum L.).

Kugler KG, Siegwart G, Nussbaumer T, Ametz C, Spannagl M, Steiner B, Lemmens M, Mayer KF, Buerstmayr H, Schweiger W.

BMC Genomics. 2013 Oct 24;14:728. doi: 10.1186/1471-2164-14-728.

PMID:
24152241
[PubMed - in process]
Free PMC Article
17.

Reticulate evolution of the rye genome.

Martis MM, Zhou R, Haseneyer G, Schmutzer T, Vrána J, Kubaláková M, König S, Kugler KG, Scholz U, Hackauf B, Korzun V, Schön CC, Dolezel J, Bauer E, Mayer KF, Stein N.

Plant Cell. 2013 Oct;25(10):3685-98. doi: 10.1105/tpc.113.114553. Epub 2013 Oct 8.

PMID:
24104565
[PubMed - in process]
Free PMC Article
18.

Analysing complex Triticeae genomes - concepts and strategies.

Spannagl M, Martis MM, Pfeifer M, Nussbaumer T, Mayer KF.

Plant Methods. 2013 Sep 6;9(1):35. doi: 10.1186/1746-4811-9-35.

PMID:
24011260
[PubMed]
Free PMC Article
19.

Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ).

Mascher M, Muehlbauer GJ, Rokhsar DS, Chapman J, Schmutz J, Barry K, Muñoz-Amatriaín M, Close TJ, Wise RP, Schulman AH, Himmelbach A, Mayer KF, Scholz U, Poland JA, Stein N, Waugh R.

Plant J. 2013 Nov;76(4):718-27. doi: 10.1111/tpj.12319. Epub 2013 Oct 10.

PMID:
23998490
[PubMed - indexed for MEDLINE]
20.

Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond.

Mascher M, Richmond TA, Gerhardt DJ, Himmelbach A, Clissold L, Sampath D, Ayling S, Steuernagel B, Pfeifer M, D'Ascenzo M, Akhunov ED, Hedley PE, Gonzales AM, Morrell PL, Kilian B, Blattner FR, Scholz U, Mayer KF, Flavell AJ, Muehlbauer GJ, Waugh R, Jeddeloh JA, Stein N.

Plant J. 2013 Nov;76(3):494-505. doi: 10.1111/tpj.12294. Epub 2013 Aug 24.

PMID:
23889683
[PubMed - indexed for MEDLINE]

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