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Results: 20

1.

Environmental Response and Genomic Regions Correlated with Rice Root Growth and Yield under Drought in the OryzaSNP Panel across Multiple Study Systems.

Wade LJ, Bartolome V, Mauleon R, Vasant VD, Prabakar SM, Chelliah M, Kameoka E, Nagendra K, Reddy KR, Varma CM, Patil KG, Shrestha R, Al-Shugeairy Z, Al-Ogaidi F, Munasinghe M, Gowda V, Semon M, Suralta RR, Shenoy V, Vadez V, Serraj R, Shashidhar HE, Yamauchi A, Babu RC, Price A, McNally KL, Henry A.

PLoS One. 2015 Apr 24;10(4):e0124127. doi: 10.1371/journal.pone.0124127. eCollection 2015.

2.

Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress.

Li X, Lawas LM, Malo R, Glaubitz U, Erban A, Mauleon R, Heuer S, Zuther E, Kopka J, Hincha DK, Jagadish KS.

Plant Cell Environ. 2015 Mar 31. doi: 10.1111/pce.12545. [Epub ahead of print]

PMID:
25828772
3.

Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance.

Tonnessen BW, Manosalva P, Lang JM, Baraoidan M, Bordeos A, Mauleon R, Oard J, Hulbert S, Leung H, Leach JE.

Plant Mol Biol. 2015 Feb;87(3):273-86. doi: 10.1007/s11103-014-0275-9. Epub 2014 Dec 17.

PMID:
25515696
4.

SNP-Seek database of SNPs derived from 3000 rice genomes.

Alexandrov N, Tai S, Wang W, Mansueto L, Palis K, Fuentes RR, Ulat VJ, Chebotarov D, Zhang G, Li Z, Mauleon R, Hamilton RS, McNally KL.

Nucleic Acids Res. 2015 Jan;43(Database issue):D1023-7. doi: 10.1093/nar/gku1039. Epub 2014 Nov 27.

5.

Efficient imputation of missing markers in low-coverage genotyping-by-sequencing data from multiparental crosses.

Huang BE, Raghavan C, Mauleon R, Broman KW, Leung H.

Genetics. 2014 May;197(1):401-4. doi: 10.1534/genetics.113.158014. Epub 2014 Feb 28.

6.

Suppression of cell wall-related genes associated with stunting of Oryza glaberrima infected with Rice tungro spherical virus.

Budot BO, Encabo JR, Ambita ID, Atienza-Grande GA, Satoh K, Kondoh H, Ulat VJ, Mauleon R, Kikuchi S, Choi IR.

Front Microbiol. 2014 Feb 4;5:26. doi: 10.3389/fmicb.2014.00026. eCollection 2014.

7.

Multi-parent advanced generation inter-cross (MAGIC) populations in rice: progress and potential for genetics research and breeding.

Bandillo N, Raghavan C, Muyco PA, Sevilla MA, Lobina IT, Dilla-Ermita CJ, Tung CW, McCouch S, Thomson M, Mauleon R, Singh RK, Gregorio G, Redoña E, Leung H.

Rice (N Y). 2013 May 6;6(1):11. doi: 10.1186/1939-8433-6-11.

PMID:
24280183
8.

Genetic, physiological, and gene expression analyses reveal that multiple QTL enhance yield of rice mega-variety IR64 under drought.

Swamy BP, Ahmed HU, Henry A, Mauleon R, Dixit S, Vikram P, Tilatto R, Verulkar SB, Perraju P, Mandal NP, Variar M, Robin S, Chandrababu R, Singh ON, Dwivedi JL, Das SP, Mishra KK, Yadaw RB, Aditya TL, Karmakar B, Satoh K, Moumeni A, Kikuchi S, Leung H, Kumar A.

PLoS One. 2013 May 8;8(5):e62795. doi: 10.1371/journal.pone.0062795. Print 2013.

9.

Transcriptome profiling of leaf elongation zone under drought in contrasting rice cultivars.

Cal AJ, Liu D, Mauleon R, Hsing YI, Serraj R.

PLoS One. 2013;8(1):e54537. doi: 10.1371/journal.pone.0054537. Epub 2013 Jan 23.

10.

Gene expression responses to Rice tungro spherical virus in susceptible and resistant near-isogenic rice plants.

Satoh K, Kondoh H, De Leon TB, Macalalad RJ, Cabunagan RC, Cabauatan PQ, Mauleon R, Kikuchi S, Choi IR.

Virus Res. 2013 Jan;171(1):111-20. doi: 10.1016/j.virusres.2012.11.003. Epub 2012 Nov 23.

PMID:
23183448
11.

Brassinosteroids antagonize gibberellin- and salicylate-mediated root immunity in rice.

De Vleesschauwer D, Van Buyten E, Satoh K, Balidion J, Mauleon R, Choi IR, Vera-Cruz C, Kikuchi S, Höfte M.

Plant Physiol. 2012 Apr;158(4):1833-46. doi: 10.1104/pp.112.193672. Epub 2012 Feb 21.

12.

Genetic variation in biomass traits among 20 diverse rice varieties.

Jahn CE, Mckay JK, Mauleon R, Stephens J, McNally KL, Bush DR, Leung H, Leach JE.

Plant Physiol. 2011 Jan;155(1):157-68. doi: 10.1104/pp.110.165654. Epub 2010 Nov 9.

13.

Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress.

Yun KY, Park MR, Mohanty B, Herath V, Xu F, Mauleon R, Wijaya E, Bajic VB, Bruskiewich R, de Los Reyes BG.

BMC Plant Biol. 2010 Jan 25;10:16. doi: 10.1186/1471-2229-10-16.

14.

Multifunctional crop trait ontology for breeders' data: field book, annotation, data discovery and semantic enrichment of the literature.

Shrestha R, Arnaud E, Mauleon R, Senger M, Davenport GF, Hancock D, Morrison N, Bruskiewich R, McLaren G.

AoB Plants. 2010;2010:plq008. doi: 10.1093/aobpla/plq008. Epub 2010 May 27.

15.

Detection of genomic deletions in rice using oligonucleotide microarrays.

Bruce M, Hess A, Bai J, Mauleon R, Diaz MG, Sugiyama N, Bordeos A, Wang GL, Leung H, Leach JE.

BMC Genomics. 2009 Mar 25;10:129. doi: 10.1186/1471-2164-10-129.

16.

The generation challenge programme platform: semantic standards and workbench for crop science.

Bruskiewich R, Senger M, Davenport G, Ruiz M, Rouard M, Hazekamp T, Takeya M, Doi K, Satoh K, Costa M, Simon R, Balaji J, Akintunde A, Mauleon R, Wanchana S, Shah T, Anacleto M, Portugal A, Ulat VJ, Thongjuea S, Braak K, Ritter S, Dereeper A, Skofic M, Rojas E, Martins N, Pappas G, Alamban R, Almodiel R, Barboza LH, Detras J, Manansala K, Mendoza MJ, Morales J, Peralta B, Valerio R, Zhang Y, Gregorio S, Hermocilla J, Echavez M, Yap JM, Farmer A, Schiltz G, Lee J, Casstevens T, Jaiswal P, Meintjes A, Wilkinson M, Good B, Wagner J, Morris J, Marshall D, Collins A, Kikuchi S, Metz T, McLaren G, van Hintum T.

Int J Plant Genomics. 2008;2008:369601. doi: 10.1155/2008/369601.

17.

Development of a novel data mining tool to find cis-elements in rice gene promoter regions.

Doi K, Hosaka A, Nagata T, Satoh K, Suzuki K, Mauleon R, Mendoza MJ, Bruskiewich R, Kikuchi S.

BMC Plant Biol. 2008 Feb 27;8:20. doi: 10.1186/1471-2229-8-20.

18.

The Generation Challenge Programme comparative plant stress-responsive gene catalogue.

Wanchana S, Thongjuea S, Ulat VJ, Anacleto M, Mauleon R, Conte M, Rouard M, Ruiz M, Krishnamurthy N, Sjolander K, van Hintum T, Bruskiewich RM.

Nucleic Acids Res. 2008 Jan;36(Database issue):D943-6. Epub 2007 Oct 11.

19.

Chemical- and irradiation-induced mutants of indica rice IR64 for forward and reverse genetics.

Wu JL, Wu C, Lei C, Baraoidan M, Bordeos A, Madamba MR, Ramos-Pamplona M, Mauleon R, Portugal A, Ulat VJ, Bruskiewich R, Wang G, Leach J, Khush G, Leung H.

Plant Mol Biol. 2005 Sep;59(1):85-97.

PMID:
16217604
20.

Candidate defense genes as predictors of quantitative blast resistance in rice.

Liu B, Zhang S, Zhu X, Yang Q, Wu S, Mei M, Mauleon R, Leach J, Mew T, Leung H.

Mol Plant Microbe Interact. 2004 Oct;17(10):1146-52.

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