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Items: 1 to 20 of 72

1.

Data Management for Heterogeneous Genomic Datasets.

Ceri S, Kaitoua A, Masseroli M, Pinoli P, Venco F.

IEEE/ACM Trans Comput Biol Bioinform. 2016 Jun 7. [Epub ahead of print]

PMID:
27295683
2.

Analysis of metabolomic data: tools, current strategies and future challenges for omics data integration.

Cambiaghi A, Ferrario M, Masseroli M.

Brief Bioinform. 2016 Apr 12. pii: bbw031. [Epub ahead of print]

PMID:
27075479
3.

Ontology-Based Prediction and Prioritization of Gene Functional Annotations.

Chicco D, Masseroli M.

IEEE/ACM Trans Comput Biol Bioinform. 2016 Mar-Apr;13(2):248-60. doi: 10.1109/TCBB.2015.2459694.

PMID:
27045825
4.

Integration and Querying of Genomic and Proteomic Semantic Annotations for Biomedical Knowledge Extraction.

Masseroli M, Canakoglu A, Ceri S.

IEEE/ACM Trans Comput Biol Bioinform. 2016 Mar-Apr;13(2):209-19. doi: 10.1109/TCBB.2015.2453944.

PMID:
27045824
5.

MuSERA: Multiple Sample Enriched Region Assessment.

Jalili V, Matteucci M, Morelli MJ, Masseroli M.

Brief Bioinform. 2016 Mar 24. pii: bbw029. [Epub ahead of print]

PMID:
27013647
6.

Cross-organism learning method to discover new gene functionalities.

Domeniconi G, Masseroli M, Moro G, Pinoli P.

Comput Methods Programs Biomed. 2016 Apr;126:20-34. doi: 10.1016/j.cmpb.2015.12.002. Epub 2015 Dec 17.

PMID:
26724853
7.

Ontology-Based Search of Genomic Metadata.

Fernandez JD, Lenzerini M, Masseroli M, Venco F, Ceri S.

IEEE/ACM Trans Comput Biol Bioinform. 2016 Mar-Apr;13(2):233-47. doi: 10.1109/TCBB.2015.2495179. Epub 2015 Oct 26.

PMID:
26529777
8.

Software Suite for Gene and Protein Annotation Prediction and Similarity Search.

Chicco D, Masseroli M.

IEEE/ACM Trans Comput Biol Bioinform. 2015 Jul-Aug;12(4):837-43. doi: 10.1109/TCBB.2014.2382127.

PMID:
26357324
9.

Detection of gene annotations and protein-protein interaction associated disorders through transitive relationships between integrated annotations.

Masseroli M, Canakoglu A, Quigliatti M.

BMC Genomics. 2015;16:S5. doi: 10.1186/1471-2164-16-S6-S5. Epub 2015 Jun 1.

10.

Using combined evidence from replicates to evaluate ChIP-seq peaks.

Jalili V, Matteucci M, Masseroli M, Morelli MJ.

Bioinformatics. 2015 Sep 1;31(17):2761-9. doi: 10.1093/bioinformatics/btv293. Epub 2015 May 7.

PMID:
25957351
11.

Computational algorithms to predict Gene Ontology annotations.

Pinoli P, Chicco D, Masseroli M.

BMC Bioinformatics. 2015;16 Suppl 6:S4. doi: 10.1186/1471-2105-16-S6-S4. Epub 2015 Apr 17.

12.

GenoMetric Query Language: a novel approach to large-scale genomic data management.

Masseroli M, Pinoli P, Venco F, Kaitoua A, Jalili V, Palluzzi F, Muller H, Ceri S.

Bioinformatics. 2015 Jun 15;31(12):1881-8. doi: 10.1093/bioinformatics/btv048. Epub 2015 Feb 3.

13.

NETTAB 2012 on "Integrated Bio-Search".

Romano P, Lisacek F, Masseroli M.

BMC Bioinformatics. 2014;15 Suppl 1:S1. doi: 10.1186/1471-2105-15-S1-S1. Epub 2014 Jan 10.

14.

Explorative search of distributed bio-data to answer complex biomedical questions.

Masseroli M, Picozzi M, Ghisalberti G, Ceri S.

BMC Bioinformatics. 2014;15 Suppl 1:S3. doi: 10.1186/1471-2105-15-S1-S3. Epub 2014 Jan 10.

15.

Integrated Bio-Search: challenges and trends for the integration, search and comprehensive processing of biological information.

Masseroli M, Mons B, Bongcam-Rudloff E, Ceri S, Kel A, Rechenmann F, Lisacek F, Romano P.

BMC Bioinformatics. 2014;15 Suppl 1:S2. doi: 10.1186/1471-2105-15-S1-S2. Epub 2014 Jan 10. Review.

16.

Clinical Bioinformatics: challenges and opportunities.

Bellazzi R, Masseroli M, Murphy S, Shabo A, Romano P.

BMC Bioinformatics. 2012;13 Suppl 14:S1. doi: 10.1186/1471-2105-13-S14-S1. Epub 2012 Sep 7.

17.

Trends in biomedical engineering: focus on Genomics and Proteomics.

Pattini L, Bertacco R, Candiani G, Masseroli M, Servi S.

J Appl Biomater Biomech. 2011 May-Aug;9(2):98-108. doi: 10.5301/JABB.2011.8564. Review.

PMID:
22065387
18.

Bio-Search Computing: integration and global ranking of bioinformatics search results.

Masseroli M, Ghisalberti G, Ceri S.

J Integr Bioinform. 2011 Sep 6;8(2):166. doi: 10.2390/biecoll-jib-2011-166.

PMID:
21893701
19.

Telemedicine and e-health.

Pinciroli F, Corso M, Fuggetta A, Masseroli M, Bonacina S, Marceglia S.

IEEE Pulse. 2011 May-Jun;2(3):62-70. doi: 10.1109/MPUL.2011.941524.

PMID:
21642034
20.

Quality controls in integrative approaches to detect errors and inconsistencies in biological databases.

Ghisalberti G, Masseroli M, Tettamanti L.

J Integr Bioinform. 2010 Mar 25;7(3). doi: 10.2390/biecoll-jib-2010-119.

PMID:
20375464
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