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Results: 17

1.

tagtog: interactive and text-mining-assisted annotation of gene mentions in PLOS full-text articles.

Cejuela JM, McQuilton P, Ponting L, Marygold SJ, Stefancsik R, Millburn GH, Rost B; FlyBase Consortium.

Database (Oxford). 2014 Apr 7;2014(0):bau033. doi: 10.1093/database/bau033. Print 2014.

2.

The Drosophila phenotype ontology.

Osumi-Sutherland D, Marygold SJ, Millburn GH, McQuilton PA, Ponting L, Stefancsik R, Falls K, Brown NH, Gkoutos GV.

J Biomed Semantics. 2013 Oct 18;4(1):30. doi: 10.1186/2041-1480-4-30.

3.

Opportunities for text mining in the FlyBase genetic literature curation workflow.

McQuilton P; FlyBase Consortium.

Database (Oxford). 2012 Nov 17;2012:bas039. doi: 10.1093/database/bas039. Print 2012.

4.

FlyBase: improvements to the bibliography.

Marygold SJ, Leyland PC, Seal RL, Goodman JL, Thurmond J, Strelets VB, Wilson RJ; FlyBase consortium.

Nucleic Acids Res. 2013 Jan;41(Database issue):D751-7. doi: 10.1093/nar/gks1024. Epub 2012 Nov 3.

5.

Directly e-mailing authors of newly published papers encourages community curation.

Bunt SM, Grumbling GB, Field HI, Marygold SJ, Brown NH, Millburn GH; FlyBase Consortium.

Database (Oxford). 2012 May 2;2012:bas024. doi: 10.1093/database/bas024. Print 2012.

6.

Automatic categorization of diverse experimental information in the bioscience literature.

Fang R, Schindelman G, Van Auken K, Fernandes J, Chen W, Wang X, Davis P, Tuli MA, Marygold SJ, Millburn G, Matthews B, Zhang H, Brown N, Gelbart WM, Sternberg PW.

BMC Bioinformatics. 2012 Jan 26;13:16. doi: 10.1186/1471-2105-13-16.

7.

Drosophila ribosomal protein mutants control tissue growth non-autonomously via effects on the prothoracic gland and ecdysone.

Lin JI, Mitchell NC, Kalcina M, Tchoubrieva E, Stewart MJ, Marygold SJ, Walker CD, Thomas G, Leevers SJ, Pearson RB, Quinn LM, Hannan RD.

PLoS Genet. 2011 Dec;7(12):e1002408. doi: 10.1371/journal.pgen.1002408. Epub 2011 Dec 15.

8.

FlyBase 101--the basics of navigating FlyBase.

McQuilton P, St Pierre SE, Thurmond J; FlyBase Consortium.

Nucleic Acids Res. 2012 Jan;40(Database issue):D706-14. doi: 10.1093/nar/gkr1030. Epub 2011 Nov 29.

9.

Genetic characterization of ebi reveals its critical role in Drosophila wing growth.

Marygold SJ, Walker C, Orme M, Leevers S.

Fly (Austin). 2011 Oct-Dec;5(4):291-303. doi: 10.4161/fly.5.4.18276. Epub 2011 Oct 1.

10.

Toward an interactive article: integrating journals and biological databases.

Rangarajan A, Schedl T, Yook K, Chan J, Haenel S, Otis L, Faelten S, DePellegrin-Connelly T, Isaacson R, Skrzypek MS, Marygold SJ, Stefancsik R, Cherry JM, Sternberg PW, Müller HM.

BMC Bioinformatics. 2011 May 19;12:175. doi: 10.1186/1471-2105-12-175.

11.

The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation.

Loevenich SN, Brunner E, King NL, Deutsch EW, Stein SE; FlyBase Consortium, Aebersold R, Hafen E.

BMC Bioinformatics. 2009 Feb 11;10:59. doi: 10.1186/1471-2105-10-59.

12.

FlyBase: enhancing Drosophila Gene Ontology annotations.

Tweedie S, Ashburner M, Falls K, Leyland P, McQuilton P, Marygold S, Millburn G, Osumi-Sutherland D, Schroeder A, Seal R, Zhang H; FlyBase Consortium.

Nucleic Acids Res. 2009 Jan;37(Database issue):D555-9. doi: 10.1093/nar/gkn788. Epub 2008 Oct 23.

13.

The ribosomal protein genes and Minute loci of Drosophila melanogaster.

Marygold SJ, Roote J, Reuter G, Lambertsson A, Ashburner M, Millburn GH, Harrison PM, Yu Z, Kenmochi N, Kaufman TC, Leevers SJ, Cook KR.

Genome Biol. 2007;8(10):R216.

14.

A genetic screen for dominant modifiers of a small-wing phenotype in Drosophila melanogaster identifies proteins involved in splicing and translation.

Coelho CM, Kolevski B, Walker CD, Lavagi I, Shaw T, Ebert A, Leevers SJ, Marygold SJ.

Genetics. 2005 Oct;171(2):597-614. Epub 2005 Jul 5.

15.
16.

Armadillo levels are reduced during mitosis in Drosophila.

Marygold SJ, Vincent JP.

Mech Dev. 2003 Feb;120(2):157-65.

17.

Growth signaling: TSC takes its place.

Marygold SJ, Leevers SJ.

Curr Biol. 2002 Nov 19;12(22):R785-7. Review.

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